Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj3g3v0989840.1

Overview

Field Value
Gene ID Lj3g3v0989840
Transcript ID Lj3g3v0989840.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: kinesin-like protein KIFC3-like [Cicer arietinum] gi|502088052|ref|XP_004488714.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 129 139 11 9.70E-255
PANTHER 129 139 11 9.70E-255
Coils 190 217 28
Pfam 196 234 39 1.60E-04
PANTHER 316 755 440 9.70E-255
PANTHER 316 755 440 9.70E-255
CDD 334 664 331 5.11E-176
SMART 334 670 337 9.10E-156
Gene3D 334 670 337 1.10E-120
SUPERFAMILY 336 696 361 4.93E-116
ProSiteProfiles 336 662 327 113.508
Pfam 342 662 321 7.20E-109
PRINTS 410 431 22 1.10E-37
PRINTS 532 549 18 1.10E-37
ProSitePatterns 562 573 12
PRINTS 563 581 19 1.10E-37
PRINTS 612 633 22 1.10E-37
Coils 689 730 42

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Microtubule motor activity Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Microtubule-based movement A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.
Molecular function Microtubule binding Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.

Expression data

Expression pattern

Expression pattern of Lj3g3v0989840.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0989840.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.