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THUMP domain
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | THUMP domain containing protein [Medicago truncatula] gi|357481361|ref|XP_003610966.1| | 9 | ||
– | Uncharacterized protein TCM_011165 [Theobroma cacao] gi|508709321|gb|EOY01218.1| | 8 | ||
– | Uncharacterized protein TCM_011165 [Theobroma cacao] gi|508709321|gb|EOY01218.1| | 8 | ||
– | THUMP domain-containing protein 1 like; TAIR: AT5G12410.1 THUMP domain-containing protein; Swiss-Prot: sp|Q99J36|THUM1_MOUSE THUMP domain-containing protein 1; TrEMBL-Plants: tr|G7K999|G7K999_MEDTR THUMP domain protein; Found in the gene: LotjaGi2g1v0443500 | 11 | ||
– | THUMP domain-containing protein 1; TAIR: AT1G09290.1 hypothetical protein; Swiss-Prot: sp|Q9VZD8|THUM1_DROME THUMP domain-containing protein 1 homolog; TrEMBL-Plants: tr|D2KTV6|D2KTV6_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0347300 | 7 | ||
– | THUMP domain-containing protein 1; TAIR: AT1G09290.1 hypothetical protein; Swiss-Prot: sp|Q9VZD8|THUM1_DROME THUMP domain-containing protein 1 homolog; TrEMBL-Plants: tr|D2KTV6|D2KTV6_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0347300 | 9 | ||
– | THUMP domain-containing protein 1; TAIR: AT1G09290.1 hypothetical protein; Swiss-Prot: sp|Q9VZD8|THUM1_DROME THUMP domain-containing protein 1 homolog; TrEMBL-Plants: tr|I3SZ74|I3SZ74_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0347300 | 9 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
mobidb-lite | MobiDBLite | 1 | 14.29 |