Domain Predictions — View

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PF05050

Source: Pfam

Description

Methyltransferase FkbM domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0292279.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Methyltransferases [Theobroma cacao] gi\|508715155\|gb\|EOY07052.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.150 IPR006342 IPR013216 IPR029063 NON_CYTOPLASMIC_DOMAIN PF05050 PF08241 PTHR10108 PTHR10108:SF885 SSF53335 TMhelix TRANSMEMBRANE	13
Lj4g3v1879150.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nodulation protein noeI [Theobroma cacao] gi\|508783803\|gb\|EOY31059.1\|	Domains G3DSA:3.40.50.150 IPR006342 IPR029063 PF05050 PTHR34203 PTHR34203:SF2 SSF53335 TIGR01444	8
LotjaGi1g1v0448400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Methyltransferase; TAIR: AT5G01710.1 methyltransferase; Swiss-Prot: sp\|A5FZN7\|BIOD_ACICJ ATP-dependent dethiobiotin synthetase BioD; TrEMBL-Plants: tr\|V7B2Z1\|V7B2Z1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0448400	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.150 IPR006342 IPR013216 IPR029063 NON_CYTOPLASMIC_DOMAIN PF05050 PF08241 PTHR44843 PTHR44843:SF2 SSF53335 TMhelix TRANSMEMBRANE	13
LotjaGi3g1v0201400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Methyltransferase; TAIR: AT5G01710.1 methyltransferase; Swiss-Prot: sp\|Q88SI6\|MENG_LACPL Demethylmenaquinone methyltransferase; TrEMBL-Plants: tr\|V7ALZ9\|V7ALZ9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0201400	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.150 IPR006342 IPR013216 IPR029063 NON_CYTOPLASMIC_DOMAIN PF05050 PF08241 PTHR44843 PTHR44843:SF2 SSF53335 TMhelix TRANSMEMBRANE	13
LotjaGi4g1v0270500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Family methyltransferase; TAIR: AT2G26680.1 FkbM family methyltransferase; Swiss-Prot: sp\|D4GYG5\|AGLP_HALVD Hexuronic acid methyltransferase AglP; TrEMBL-Plants: tr\|G7JCY4\|G7JCY4_MEDTR FkbM family methyltransferase; Found in the gene: LotjaGi4g1v0270500	Domains G3DSA:3.40.50.150 IPR006342 IPR029063 NON_CYTOPLASMIC_DOMAIN PF05050 PTHR34203 PTHR34203:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53335 TIGR01444 TMhelix	14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TMhelix	TMHMM	1	20.00