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LotjaGi3g1v0201400.1

Overview

Field Value
Gene ID LotjaGi3g1v0201400
Transcript ID LotjaGi3g1v0201400.1
Lotus japonicus genome version Gifu v1.2
Description Methyltransferase; TAIR: AT5G01710.1 methyltransferase; Swiss-Prot: sp|Q88SI6|MENG_LACPL Demethylmenaquinone methyltransferase; TrEMBL-Plants: tr|V7ALZ9|V7ALZ9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0201400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:29374573..29379878) extracted from Lotus japonicus Gifu genome v1.2.

TATCATTCATATATTCACTTCCTATCTCTCTAGTGGTCTATACACTTTAACAAACCTAAAGGGGTTATGCCTAGGGGTGT ACAAGACCCGGCCCTACCCGCCAACCCGTCCCGGCCCAAGCCTTTAAGGCCGGGTTCAACCCGGCCCGATCATTAAAAGA GACCGGGTTCGGGTTGATCTTTGAGTTACCCGACTTCGGGTAGGGTCGGGTTCGGGTTGACACTCGGGTCACCCGCCCCG TCCCACATATATATTTTATAAAATTTTAATTTGTTATAATGATTAAAATGTGATACATGATGCTCAAATTTATCTTACCT TGTAGATGAAATTAAAATGTTTAACATTTACCTTATGAATTAAATAAACGTTGGTCAAACTATGGACACTTTCATGCTCT AAAAAGAGAAAATTATGTGTGTGTATTATGCATATGTAAGACAAGTGAAGAAATGATCAAACAAAATGTAAACCTCTCAA GTGCAATAGGTTATGAAAGAATTGGATCCTTTCAAGTTATTTATTCTAAAAAACAGTTCCAACTTATAACTCTTTTAGTA TGTTATTATCTTTAAATCTTACAATTAGTATCAAATAGTCTTAAACTTATTGTCCCTCGGGCCAACCCGGTCCCGTCCTA CATAGACCCGTCCAAAATTGGACCCGCATAATATCTTGTCGCTTCGGGTCTAAGGACGGGTTAGGGTCTATAAATTGACT CGATCAATATTTAGGGCCGGGTTAGGGTTAACCAAAACCCGTCTCAACCCGTCCCTTGTACACCCCTAGCTATGCCTACC TCATTGAGTGAATATAATATGGTTTGACCAAACAAATATCTATTATAGGATAAAAGTTGCTAATCCTCGCGTTGGAGCTG GCATTTCACACACTGACAGTTCAACGTTTCCAGAAACATCACATCACGCAATTGTCGCATTCATACTTCGGCAATAAACC CGTCATTAAACGATGCCGTATTCGTATCTCTTACCAAAACACATGTAAACTCTGAAATTGGCATTTCTTGTAACTCGCGC ATTCCATTCCATTACGCGCATTAGTATAATTAATTAACCGGCTATTCCGGTCACACGCTACCACACCGCGTTCCACTCCT TCCATATTACTATTATCTGTATAGAACAACAACACCCTCACTCATTCAACCCAACCATCACCGAGTCACTCACTCACTCA AAACACCACCACCTCCGAGTCATGGACTCGTTCTCCGCCACTTCTCCATAGAAACAAAACCACACCATGAACAAAACCAT GAATTCCCGTTTTACCCCTCGCCGCAACCTCCCAATCTCCGCCACCACAACACCGTCCCTCATCGGCGGCAACCATACCT CCGCCCGATTCTGCTCCCGTTAGAGAAAAGAAGAAAAACAAAACCTCTTTTTCCTTCCATAAAATTCCATTCATTTTTTT CTGATTTTCCATTTTTTCATTATTTTATTTTCTGTATAGAGAAAAAGGTGCATAATCTGTTACCATGGAACCCGCCGCAG GCAAACCGGGCTTCCTCCGGAACGTTCTGATACGGTTATTTCTCTTCGGCGTTTTCATCGTCCTCGTTCGCTTCGCTTAC GTCATCACCATCGCCGGCGAGTCCTGCAACCTCGGCGACTTCTGCTTCTTCTCCGCGCCGGAGTCTCTCAACGTCGCCGG CACCCTCGCCGCAACCGGGACAAGCACCCTCGCCGCGCGCTCTGCCGTCGGCGACGCGTCGCCGGAGGCTTACGCTAGCA AGGACTGGATCAACGGCGTCCGGTTCTACTCCTCCGTGTTTCAGGACCTCGTCGCCGCCGGGCACCTCTCGCCGGAGTCG AAATCGCTCTGCGTGGAGACGCCGACCGGGCGGGATGTTCTCGCTCTGCGGGAGATCGGCGTGACGGACGCTGTTGGGAT CTCGAAGAAGGCGTGGAAGCCGTTGGTGAAATCCGGCAACGCGCACCGGATTCCGTTCGGGAACAACAGCTTTGACTTCG TGTTCGCCGGCGAAGGCGGCCTGGAGAAGTCGCCGCGGGTGGCGGAATTCGCCGGCGAGGTCGCCCGGACGCTGAAACCC GAAGGGTTTGCTGCGTTCCATGTAAAGGCCAATGATTCTTACAGTTACAATTCATTTGTTGATTTGTTCAAATTTTGTTG CAAAGTAGTGAGATTGAATGATATAGAAGGGTTTGATTCATCGATGCCACACATCAGAGAAATTGTTGTGAAGAAAGAGG GTTATGGGGTTGGTCAATTTGATGGTGAATCTGCAGATTTTCATGGGAAATGCTCTGTTCCAGGGTATAAACAAGAGTTG ATTAGGAATGCTGAGCCTTTGATTGAAGAGGAGCCTCTGAAGCCATGGCTCACTCTCAAGAAGAATGTGAAGAACATCAA GTACCTTCCTTCAGTGGTTGATATAAGCTTTAAGAATAGGTATTTGTATGTGGATGTTGGTGCTAGAAGCTATGGGTCTA GCATTGGAAGCTGGTTCAAGAAGCAGTATCCAAAACAGAACAAGACCTTTCATGTGTATGCAATTGAAGCAGATAAATCG TTTCATGAGGAGTATGGATTGAAAAAGGGGGTGACATTGCTGCCTTATGCTGCTTGGGTGAAGAATGAGACACTGGTTTT CGAGATTAACCACGACCCGGGGAAGAAAGTCGAGGTTAATGGGGAGAGGGGAATGGGGAGGATTCAGCCATTGCAGTCTC AGGGTGAGGTTTTTGATGGTGGTGAGGTTCAGAAGATACAAGGGTTTGATTTTGCCAACTGGTTGAAGAGCACGGTTTCG AAGAATGATTATGTTGTGATGAAGATGGATGTGGAGGGTACTGAGTTTGATTTGATTCCTAGATTGTTTGAAACTGGGGC TATCTGTTTGGTGGATGAGATTTTTCTTGAGTGCCATTACAATAGATGGCAGAGGTGTTGCCCTGGAGAGAGGAGTCCAA AGTATGAGAAAACATATGAGCAATGCTTGGAGCTCTTCACTTCTCTCAGATCAAGTGGAGTTCTTGTTCATCAATGGTTT TAGTAGCCCAGATAGATAGGTGAAAAATGAAAACCCTGAAATCCTTTCCACTCTTCTGTATCATTAATAATTGATTTTAG TTTCTACATGTTTCTACTTCATTACTTTACCTGGCCTATAGAGAAGATTTCACTGTTCATTAAATTTCTTTACTTGTATT TGTAACTGTTGCAACTGAAATTGAAAATCATCCCATTACATCAACTGTATTTGGTTCCACGCACCTGTTCTTTTAGTTGA GTAAATATAGCAGTTGATAGTTGATACTTTAATCTATTGTTTTTTTCTCTGATAAGATTTTGATTGTTCCTTATTTCCTT TTGTCAGTATTATCGAATTAGTTTTATTGCATGATGTGACATAATCACCAGGAATCTTTAGCCAAAAGGATCTGAAATGG GTTAGTGTTTTTCATTACCATAACTGGATAATGGTTGTGTGAGACTTCATTATCCATGATCCTATTGTTCAGGCAAAACG CCTATTAAACAAAGGGGATAGAAATAAAAGTTTCCTTTGAAGCAATGTAGGAGGCTTTTCTTTAAATTTTTGGAGTGCTT ATTCACAGTTCATTAGCTATAGGATCCGGAAACCTTCAAGTTTCCTCAAGTTGGAATTTTGTGTTTATCTCTGTTACCAT GCTTCTGATAGCTGCTAGTGGTAATTTTCAGACATGGTTAACCTTTGTGTTATATGGTTTTTTGGGTTATCAGCTATGTA TTGGTTGTGTCCTGAAAACTCTGCTTGTTTAATAAAGAGAAAGCAATTTGTCAAAAAGAGGCATAGAAAGCAAGGTGACG TTAATTAACGCAGCCATGTGAGAATGTACAACTAGTGCTTAACTGTGGTCTTTGGTTGTTGTTATAATATGGTTTTCTTT AGTTGAGTTTCTTTGCATTTATAGAAGCTAATAATGAGAGTGGACTTTGAGACCCTTCCACTTGATTCTTCTGAACTGTC ACTTTTCTGTGTGCGGACATGGTTCTTTCTTTCTTTATTGGCTTAATCCAGTTTTTGGTCCCCATCCTTTGTCATAAATA TGGCTTTAGTCCCTCGCCGGAGCAAAGGTGGGGCTAGGTCCCCAGTTTTTGGCAAAATAGTTGGCTTGGGTCCTTCCGGT CGGTTGGGTCAACGCCGGAGCTCCGCCGGTGCCACGTCAATTAATGAGCCCAGCTGGATTTTTTTTTCTTTTTTTCATTA AATTTAAATAAAATTAAAACTTATATTGAGGGATGAATACCAAGTTTATTAAATCTTTACAAGGATGAGATCCATTTTAT AATCCCTTCATAGGGACGAGATCCAAAATAAAGATGTGAAACAAGGGTGAGATCCAACATATTAATTCCATTCACTGGTA CAAAATGTCTTGGTAAGCCATTTATGTCTTTGTTATGTTGTTACTGAAATTATCATTGTTCTTTTTAATTTTTGAGCCTA ATGAGTAAAGTGCTTTTATTCGATTTAATCTCAGAGACCAAATGACTGTGGCTTTTTTCTATGGGATGATGAGTCTGGCT TAGATGGTGCAGAGAGACAAAATGTAATTGAAGGGGTGAAAACATTTGAAGAATTGGAGGATATGAAAAGGATATTGGCA GAAAGAAAGATGGAATTGGAGGCTACGAAGAGGAAGTGGGAGGACACTTTGACCAAATTGGAGGACACGAAGACCAAATT GGAGGATAGCCAGTTGAAGATTGTCAATCTGCAATGGAACCTTAAATGGGAAATTCATAAGAAGAACTCGGCAATTTTGA CATGTATTCTGTTGTTTGTAGTGGTTGTATGGCTTCGTGTGTAATGGATTATGGTGGATGTGTACCAAAATTATAAGGAT GTAACCTTAGTGGAGTGTAGCAGTAATCTAAATCATGGCTAATTGTATTACATTTTGTACCAGTGAATGAAATTAATATG TTGGATCTCACCCTTGTTTCACATCTTTATTTTGGATGTCGTCCCTATGAAGGGATTATAAAATGGATCTCATCCTTGTA AAGATTTAATAAACTTGGTATTCATCCCTCAATATAAGTTTTAATTTTATTTAAATTTAATGAAAAAAAGAAAAAAAAAT CCAGGTGGGCTCATTAATTGACGTGGCATCGGCCACGTCAGCCGGCGGAGCTCCGGCGTTGACCCAACCGGCCGGAAGGA CCCAAGCCAACTATTTTGCCAAAAACTGGGGACCTAGCCCCACCTTTGCTCCGACGAGGGACTAAAGCCATATATATGAC AAAGGATGGGGACCAAAAACTGGATT
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0201400.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAACCCGCCGCAGGCAAACCGGGCTTCCTCCGGAACGTTCTGATACGGTTATTTCTCTTCGGCGTTTTCATCGTCCT CGTTCGCTTCGCTTACGTCATCACCATCGCCGGCGAGTCCTGCAACCTCGGCGACTTCTGCTTCTTCTCCGCGCCGGAGT CTCTCAACGTCGCCGGCACCCTCGCCGCAACCGGGACAAGCACCCTCGCCGCGCGCTCTGCCGTCGGCGACGCGTCGCCG GAGGCTTACGCTAGCAAGGACTGGATCAACGGCGTCCGGTTCTACTCCTCCGTGTTTCAGGACCTCGTCGCCGCCGGGCA CCTCTCGCCGGAGTCGAAATCGCTCTGCGTGGAGACGCCGACCGGGCGGGATGTTCTCGCTCTGCGGGAGATCGGCGTGA CGGACGCTGTTGGGATCTCGAAGAAGGCGTGGAAGCCGTTGGTGAAATCCGGCAACGCGCACCGGATTCCGTTCGGGAAC AACAGCTTTGACTTCGTGTTCGCCGGCGAAGGCGGCCTGGAGAAGTCGCCGCGGGTGGCGGAATTCGCCGGCGAGGTCGC CCGGACGCTGAAACCCGAAGGGTTTGCTGCGTTCCATGTAAAGGCCAATGATTCTTACAGTTACAATTCATTTGTTGATT TGTTCAAATTTTGTTGCAAAGTAGTGAGATTGAATGATATAGAAGGGTTTGATTCATCGATGCCACACATCAGAGAAATT GTTGTGAAGAAAGAGGGTTATGGGGTTGGTCAATTTGATGGTGAATCTGCAGATTTTCATGGGAAATGCTCTGTTCCAGG GTATAAACAAGAGTTGATTAGGAATGCTGAGCCTTTGATTGAAGAGGAGCCTCTGAAGCCATGGCTCACTCTCAAGAAGA ATGTGAAGAACATCAAGTACCTTCCTTCAGTGGTTGATATAAGCTTTAAGAATAGGTATTTGTATGTGGATGTTGGTGCT AGAAGCTATGGGTCTAGCATTGGAAGCTGGTTCAAGAAGCAGTATCCAAAACAGAACAAGACCTTTCATGTGTATGCAAT TGAAGCAGATAAATCGTTTCATGAGGAGTATGGATTGAAAAAGGGGGTGACATTGCTGCCTTATGCTGCTTGGGTGAAGA ATGAGACACTGGTTTTCGAGATTAACCACGACCCGGGGAAGAAAGTCGAGGTTAATGGGGAGAGGGGAATGGGGAGGATT CAGCCATTGCAGTCTCAGGGTGAGGTTTTTGATGGTGGTGAGGTTCAGAAGATACAAGGGTTTGATTTTGCCAACTGGTT GAAGAGCACGGTTTCGAAGAATGATTATGTTGTGATGAAGATGGATGTGGAGGGTACTGAGTTTGATTTGATTCCTAGAT TGTTTGAAACTGGGGCTATCTGTTTGGTGGATGAGATTTTTCTTGAGTGCCATTACAATAGATGGCAGAGGTGTTGCCCT GGAGAGAGGAGTCCAAAGTATGAGAAAACATATGAGCAATGCTTGGAGCTCTTCACTTCTCTCAGATCAAGTGGAGTTCT TGTTCATCAATGGTTTTAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0201400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEPAAGKPGFLRNVLIRLFLFGVFIVLVRFAYVITIAGESCNLGDFCFFSAPESLNVAGTLAATGTSTLAARSAVGDASP EAYASKDWINGVRFYSSVFQDLVAAGHLSPESKSLCVETPTGRDVLALREIGVTDAVGISKKAWKPLVKSGNAHRIPFGN NSFDFVFAGEGGLEKSPRVAEFAGEVARTLKPEGFAAFHVKANDSYSYNSFVDLFKFCCKVVRLNDIEGFDSSMPHIREI VVKKEGYGVGQFDGESADFHGKCSVPGYKQELIRNAEPLIEEEPLKPWLTLKKNVKNIKYLPSVVDISFKNRYLYVDVGA RSYGSSIGSWFKKQYPKQNKTFHVYAIEADKSFHEEYGLKKGVTLLPYAAWVKNETLVFEINHDPGKKVEVNGERGMGRI QPLQSQGEVFDGGEVQKIQGFDFANWLKSTVSKNDYVVMKMDVEGTEFDLIPRLFETGAICLVDEIFLECHYNRWQRCCP GERSPKYEKTYEQCLELFTSLRSSGVLVHQWF
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR44843
1 512 512 4.9E-253 –
Phobius
CYTOPLASMIC_DOMAIN
1 13 13 - –
PANTHER
PTHR44843:SF2
1 512 512 4.9E-253 –
TMHMM
TMhelix
13 35 23 - –
Phobius
TRANSMEMBRANE
14 34 21 - –
Phobius
NON_CYTOPLASMIC_DOMAIN
35 512 478 - –
Gene3D
G3DSA:3.40.50.150
133 257 125 5.9E-7 –
Pfam
PF08241
149 198 50 2.5E-6
IPR013216
SUPERFAMILY
SSF53335
149 209 61 2.14E-8
IPR029063
Gene3D
G3DSA:3.40.50.150
296 476 181 9.4E-9 –
SUPERFAMILY
SSF53335
300 456 157 5.98E-9
IPR029063
Pfam
PF05050
317 474 158 9.7E-6
IPR006342

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008168
Molecular function Methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0201400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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