Domain Predictions — View

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PF08801

Source: Pfam

Description

Nup133 N terminal like

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 13

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0050439.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nucleoporin [Lotus japonicus] gi\|83423282\|emb\|CAI64810.1\|	Domains G3DSA:2.130.10.10 IPR007187 IPR014908 IPR015943 PF03177 PF08801 PTHR13405 PTHR13405:SF11 SSF117289 mobidb-lite	10
Lj0g3v0050449.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nucleoporin [Lotus japonicus] gi\|83423282\|emb\|CAI64810.1\|	Domains G3DSA:2.130.10.10 IPR007187 IPR014908 IPR015943 PF03177 PF08801 PTHR13405 PTHR13405:SF11 SSF117289 mobidb-lite	10
Lj1g3v2124910.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: nuclear pore complex protein Nup155-like [Glycine max] gi\|356513056\|ref\|XP_003525230.1\|	Domains IPR014908 PF08801 SignalP-noTM_EUK	3
Lj2g3v3337530.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nucleoporin [Lotus japonicus] gi\|83423282\|emb\|CAI64810.1\|	Domains G3DSA:2.130.10.10 IPR007187 IPR014908 IPR015943 PF03177 PF08801 PTHR13405 PTHR13405:SF11 SSF117289 mobidb-lite	10
Lj2g3v3337540.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	LjNup133	Nucleoporin [Lotus japonicus] gi\|83423282\|emb\|CAI64810.1\|	Domains G3DSA:2.130.10.10 IPR007187 IPR014908 IPR015943 PF03177 PF08801 PTHR13405 PTHR13405:SF11 SSF117289 mobidb-lite	10
Lj4g3v3113120.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: nuclear pore complex protein Nup155-like [Glycine max] gi\|356524549\|ref\|XP_003530891.1\|	Domains IPR004870 IPR007187 IPR014908 PF03177 PF08801 PTHR10350 PTHR10350:SF6 mobidb-lite	8
LotjaGi1g1v0009600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nuclear pore complex protein Nup133 family; TAIR: AT2G05120.2 Nucleoporin, Nup133/Nup155-like protein; Swiss-Prot: sp\|F4IGA5\|NU133_ARATH Nuclear pore complex protein NUP133; TrEMBL-Plants: tr\|Q2UY13\|Q2UY13_LOTJA Nucleoporin; Found in the gene: LotjaGi1g1v0009600	Domains G3DSA:1.25.40.700 IPR007187 IPR014908 IPR037624 PF03177 PF08801 PTHR13405 SSF117289 mobidb-lite	9
LotjaGi1g1v0420500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nuclear pore complex protein Nup155; TAIR: AT1G14850.1 nucleoporin 155; Swiss-Prot: sp\|F4HXV6\|NU155_ARATH Nuclear pore complex protein NUP155; TrEMBL-Plants: tr\|I1KQB7\|I1KQB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0420500_LC	Domains CYTOPLASMIC_DOMAIN IPR004870 IPR014908 NON_CYTOPLASMIC_DOMAIN PF08801 PTHR10350 TMhelix TRANSMEMBRANE	8
LotjaGi1g1v0420500_LC.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nuclear pore complex protein Nup155; TAIR: AT1G14850.1 nucleoporin 155; Swiss-Prot: sp\|F4HXV6\|NU155_ARATH Nuclear pore complex protein NUP155; TrEMBL-Plants: tr\|I1KQB7\|I1KQB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0420500_LC	Domains CYTOPLASMIC_DOMAIN IPR004870 IPR014908 NON_CYTOPLASMIC_DOMAIN PF08801 PTHR10350 TMhelix TRANSMEMBRANE	8
LotjaGi1g1v0420500_LC.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nuclear pore complex protein Nup155; TAIR: AT1G14850.1 nucleoporin 155; Swiss-Prot: sp\|F4HXV6\|NU155_ARATH Nuclear pore complex protein NUP155; TrEMBL-Plants: tr\|I1KQB7\|I1KQB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0420500_LC	Domains CYTOPLASMIC_DOMAIN IPR004870 IPR014908 NON_CYTOPLASMIC_DOMAIN PF08801 PTHR10350 TMhelix TRANSMEMBRANE	8
LotjaGi4g1v0457000.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nuclear pore complex protein Nup155; TAIR: AT1G14850.1 nucleoporin 155; Swiss-Prot: sp\|F4HXV6\|NU155_ARATH Nuclear pore complex protein NUP155; TrEMBL-Plants: tr\|I1KQB7\|I1KQB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0457000	Domains G3DSA:1.20.120.1880 G3DSA:1.20.58.1780 G3DSA:1.25.40.450 IPR004870 IPR007187 IPR014908 IPR042533 IPR042538 PF03177 PF08801 PTHR10350 mobidb-lite	12
LotjaGi4g1v0457000.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nuclear pore complex protein Nup155; TAIR: AT1G14850.1 nucleoporin 155; Swiss-Prot: sp\|F4HXV6\|NU155_ARATH Nuclear pore complex protein NUP155; TrEMBL-Plants: tr\|I1KQB7\|I1KQB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0457000	Domains G3DSA:1.20.120.1880 G3DSA:1.20.58.1780 G3DSA:1.25.40.450 IPR004870 IPR007187 IPR014908 IPR042533 IPR042538 PF03177 PF08801 PTHR10350 mobidb-lite	12
LotjaGi4g1v0457000.7 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nuclear pore complex protein Nup155; TAIR: AT1G14850.1 nucleoporin 155; Swiss-Prot: sp\|F4HXV6\|NU155_ARATH Nuclear pore complex protein NUP155; TrEMBL-Plants: tr\|I1KQB7\|I1KQB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0457000	Domains G3DSA:1.20.120.1880 G3DSA:1.20.58.1780 G3DSA:1.25.40.450 IPR004870 IPR007187 IPR014908 IPR042533 IPR042538 PF03177 PF08801 PTHR10350 mobidb-lite	12

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	7.69