Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PF12002

Source: Pfam

Description

MgsA AAA+ ATPase C terminal

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 3

Transcript	Name	Description	Predicted domains	Domain count
Lj2g3v3339780.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains G3DSA:1.10.3710.10 G3DSA:1.10.8.10 G3DSA:1.10.8.60 G3DSA:1.20.272.10 G3DSA:3.40.50.300 IPR003593 IPR003959 IPR008921 IPR009060 IPR015940 IPR021886 IPR027417 IPR032423 PF00004 PF00627 PF12002 PF16193 PS50030 PTHR13779 PTHR13779:SF7 SM00165 SM00382 SSF46934 SSF48019 SSF52540 cd00009 mobidb-lite	27
LotjaGi1g1v0004000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Holliday junction ATP-dependent DNA helicase RuvB; TAIR: AT1G24290.1 AAA-type ATPase family protein; Swiss-Prot: sp\|Q8CG07\|WRIP1_RAT ATPase WRNIP1; TrEMBL-Plants: tr\|A0A0L9UUH5\|A0A0L9UUH5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0004000	Domains G3DSA:1.10.3710.10 G3DSA:1.10.8.10 G3DSA:1.10.8.60 G3DSA:1.20.272.10 G3DSA:3.40.50.300 IPR003593 IPR003959 IPR008921 IPR009060 IPR015940 IPR021886 IPR027417 IPR032423 PF00004 PF00627 PF12002 PF16193 PS50030 PTHR13779 SM00165 SM00382 SSF46934 SSF48019 SSF52540 cd00009 cd18139 mobidb-lite	27
LotjaGi1g1v0004000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Holliday junction ATP-dependent DNA helicase RuvB; TAIR: AT1G24290.1 AAA-type ATPase family protein; Swiss-Prot: sp\|Q8CG07\|WRIP1_RAT ATPase WRNIP1; TrEMBL-Plants: tr\|G7KFD2\|G7KFD2_MEDTR AAA family ATPase; Found in the gene: LotjaGi1g1v0004000	Domains G3DSA:1.10.3710.10 G3DSA:1.10.8.10 G3DSA:1.10.8.60 G3DSA:1.20.272.10 G3DSA:3.40.50.300 IPR003593 IPR003959 IPR008921 IPR009060 IPR015940 IPR021886 IPR027417 IPR032423 PF00004 PF00627 PF12002 PF16193 PS50030 PTHR13779 SM00382 SSF46934 SSF48019 SSF52540 cd00009 cd18139 mobidb-lite	26

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	33.33