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PF13724

Source: Pfam

Description

DNA-binding domain

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of

Associated Lotus transcripts 6

Transcript Name Description Predicted domains Domain count
Lj1g3v2523750.1
– AF4/FMR2 family member 1 [Theobroma cacao] gi|508712591|gb|EOY04488.1|
Domains
9
Lj2g3v2414700.1
– Plant-specific domain TIGR01568 family protein [Medicago truncatula] gi|357491461|ref|XP_003616018.1|
Domains
9
Lj3g3v1421820.1
– AF4/FMR2 family member 1 [Theobroma cacao] gi|508712591|gb|EOY04488.1|
Domains
9
LotjaGi1g1v0107100.1
– Transcription repressor; TAIR: AT5G58360.1 ovate family protein 3; Swiss-Prot: sp|Q9LVL4|OFP3_ARATH Transcription repressor OFP3; TrEMBL-Plants: tr|I3S9L8|I3S9L8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0107100
Domains
10
LotjaGi1g1v0454700.1
– Transcription repressor; TAIR: AT1G06920.1 ovate family protein 4; Swiss-Prot: sp|F4HNU8|OFP4_ARATH Transcription repressor OFP4; TrEMBL-Plants: tr|V7B5F3|V7B5F3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0454700
Domains
10
LotjaGi3g1v0152600.1
– Transcription repressor; TAIR: AT1G06920.1 ovate family protein 4; Swiss-Prot: sp|O04351|OFP2_ARATH Transcription repressor OFP2; TrEMBL-Plants: tr|I3S027|I3S027_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0152600
Domains
10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 16.67