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PIRSF002155

Source: PIRSF

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003723
Molecular function RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
Subterm of
GO:0003735
Molecular function Structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.
Subterm of
GO:0006412
Biological process Translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
Subterm of
Part of
GO:0015934
Cellular component Large ribosomal subunit The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
Subterm of

Associated Lotus transcripts 14

Transcript Name Description Predicted domains Domain count
Lj3g3v1182260.1
– PREDICTED: 60S ribosomal protein L10a-1 [Glycine max] gi|356550103|ref|XP_003543429.1|
Domains
15
Lj6g3v0497330.1
– PREDICTED: 60S ribosomal protein L10a-1 [Glycine max] gi|356550103|ref|XP_003543429.1|
Domains
15
LotjaGi2g1v0155300.1
– Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|B8B9K6|R10A_ORYSI 60S ribosomal protein L10a; TrEMBL-Plants: tr|I3T625|I3T625_LOTJA Ribosomal protein; Found in the gene: LotjaGi2g1v0155300
Domains
12
LotjaGi2g1v0155300.2
– Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|B8B9K6|R10A_ORYSI 60S ribosomal protein L10a; TrEMBL-Plants: tr|I3T625|I3T625_LOTJA Ribosomal protein; Found in the gene: LotjaGi2g1v0155300
Domains
14
LotjaGi2g1v0155300.3
– Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|B8B9K6|R10A_ORYSI 60S ribosomal protein L10a; TrEMBL-Plants: tr|I3T625|I3T625_LOTJA Ribosomal protein; Found in the gene: LotjaGi2g1v0155300
Domains
12
LotjaGi2g1v0158500.1
– Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|B8B9K6|R10A_ORYSI 60S ribosomal protein L10a; TrEMBL-Plants: tr|I3T625|I3T625_LOTJA Ribosomal protein; Found in the gene: LotjaGi2g1v0158500
Domains
14
LotjaGi2g1v0158500.2
– Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|B8B9K6|R10A_ORYSI 60S ribosomal protein L10a; TrEMBL-Plants: tr|I3T625|I3T625_LOTJA Ribosomal protein; Found in the gene: LotjaGi2g1v0158500
Domains
12
LotjaGi2g1v0158500.3
– Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|B8B9K6|R10A_ORYSI 60S ribosomal protein L10a; TrEMBL-Plants: tr|I3T625|I3T625_LOTJA Ribosomal protein; Found in the gene: LotjaGi2g1v0158500
Domains
14
LotjaGi2g1v0158500.4
– Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|B8B9K6|R10A_ORYSI 60S ribosomal protein L10a; TrEMBL-Plants: tr|I3T625|I3T625_LOTJA Ribosomal protein; Found in the gene: LotjaGi2g1v0158500
Domains
12
LotjaGi3g1v0177000.2
– Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|Q8VZB9|R10A1_ARATH 60S ribosomal protein L10a-1; TrEMBL-Plants: tr|I3T625|I3T625_LOTJA Ribosomal protein; Found in the gene: LotjaGi3g1v0177000
Domains
14
LotjaGi6g1v0076800.1
– Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|B8B9K6|R10A_ORYSI 60S ribosomal protein L10a; TrEMBL-Plants: tr|I3T625|I3T625_LOTJA Ribosomal protein; Found in the gene: LotjaGi6g1v0076800
Domains
14
LotjaGi6g1v0076800.3
– Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|B8B9K6|R10A_ORYSI 60S ribosomal protein L10a; TrEMBL-Plants: tr|I3T625|I3T625_LOTJA Ribosomal protein; Found in the gene: LotjaGi6g1v0076800
Domains
12
LotjaGi6g1v0076800.4
– Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|B8B9K6|R10A_ORYSI 60S ribosomal protein L10a; TrEMBL-Plants: tr|I3T625|I3T625_LOTJA Ribosomal protein; Found in the gene: LotjaGi6g1v0076800
Domains
12
LotjaGi6g1v0076800.6
– Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|B8B9K6|R10A_ORYSI 60S ribosomal protein L10a; TrEMBL-Plants: tr|I3T625|I3T625_LOTJA Ribosomal protein; Found in the gene: LotjaGi6g1v0076800
Domains
14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd00403 CDD 1 7.14