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PIRSF028865

Source: PIRSF

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005484
Molecular function SNAP receptor activity Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion.
Subterm of
GO:0005794
Cellular component Golgi apparatus A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
Subterm of
Part of
GO:0016192
Biological process Vesicle-mediated transport A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
Subterm of

Associated Lotus transcripts 19

Transcript Name Description Predicted domains Domain count
Lj0g3v0058029.1
– PREDICTED: membrin-11-like [Glycine max] gi|356567466|ref|XP_003551940.1|
Domains
9
Lj0g3v0058029.2
– PREDICTED: membrin-11-like [Glycine max] gi|356567466|ref|XP_003551940.1|
Domains
12
Lj0g3v0205029.1
– PREDICTED: membrin-11-like [Glycine max] gi|356567466|ref|XP_003551940.1|
Domains
8
Lj1g3v0525430.1
– PREDICTED: vesicle transport v-SNARE 13-like isoform X1 [Cicer arietinum] gi|502128601|ref|XP_004500015.1|
Domains
18
Lj1g3v0525430.2
– PREDICTED: vesicle transport v-SNARE 13-like isoform X1 [Cicer arietinum] gi|502128601|ref|XP_004500015.1|
Domains
18
Lj1g3v2404350.1
– PREDICTED: vesicle transport v-SNARE 12-like [Cicer arietinum] gi|502094006|ref|XP_004490116.1|
Domains
20
Lj2g3v1277490.1
– PREDICTED: vesicle transport v-SNARE 12-like [Cicer arietinum] gi|502094006|ref|XP_004490116.1|
Domains
20
Lj2g3v1277490.2
– PREDICTED: vesicle transport v-SNARE 12-like [Cicer arietinum] gi|502094006|ref|XP_004490116.1|
Domains
20
LotjaGi1g1v0194600.1
– Vesicle transport V-SNARE protein; TAIR: AT3G29100.3 vesicle transport V-snare 13; Swiss-Prot: sp|Q9LVP9|VTI13_ARATH Vesicle transport v-SNARE 13; TrEMBL-Plants: tr|V7AY13|V7AY13_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0194600
Domains
19
LotjaGi1g1v0506300.1
– Vesicle transport v-SNARE family protein; TAIR: AT3G29100.3 vesicle transport V-snare 13; Swiss-Prot: sp|Q9LVP9|VTI13_ARATH Vesicle transport v-SNARE 13; TrEMBL-Plants: tr|C6T736|C6T736_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0506300
Domains
19
LotjaGi2g1v0238800.1
– Membrin; TAIR: AT2G36900.1 membrin 11; Swiss-Prot: sp|Q9SJL6|MEM11_ARATH Membrin-11; TrEMBL-Plants: tr|V7BNW0|V7BNW0_PHAVU Membrin; Found in the gene: LotjaGi2g1v0238800
Domains
12
LotjaGi2g1v0261800.1
– Vesicle transport v-SNARE family protein; TAIR: AT3G29100.3 vesicle transport V-snare 13; Swiss-Prot: sp|Q9LVP9|VTI13_ARATH Vesicle transport v-SNARE 13; TrEMBL-Plants: tr|I3SU58|I3SU58_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0261800
Domains
19
LotjaGi2g1v0261800.2
– Vesicle transport v-SNARE family protein; TAIR: AT3G29100.3 vesicle transport V-snare 13; Swiss-Prot: sp|Q9LVP9|VTI13_ARATH Vesicle transport v-SNARE 13; TrEMBL-Plants: tr|I3SU58|I3SU58_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0261800
Domains
19
LotjaGi2g1v0300300.1
– Vesicle transport v-SNARE family protein; TAIR: AT1G26670.1 Vesicle transport v-SNARE family protein; Swiss-Prot: sp|Q9SEL5|VTI12_ARATH Vesicle transport v-SNARE 12; TrEMBL-Plants: tr|A0A1J7HNX3|A0A1J7HNX3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0300300
Domains
21
LotjaGi2g1v0300300.2
– Vesicle transport v-SNARE family protein; TAIR: AT1G26670.1 Vesicle transport v-SNARE family protein; Swiss-Prot: sp|Q9SEL5|VTI12_ARATH Vesicle transport v-SNARE 12; TrEMBL-Plants: tr|A0A1J7HNX3|A0A1J7HNX3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0300300
Domains
25
LotjaGi2g1v0300300.3
– Vesicle transport v-SNARE family protein; TAIR: AT1G26670.1 Vesicle transport v-SNARE family protein; Swiss-Prot: sp|Q9SEL5|VTI12_ARATH Vesicle transport v-SNARE 12; TrEMBL-Plants: tr|A0A1J7HNX3|A0A1J7HNX3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0300300
Domains
21
LotjaGi2g1v0300300.4
– Vesicle transport v-SNARE family protein; TAIR: AT1G26670.1 Vesicle transport v-SNARE family protein; Swiss-Prot: sp|Q9SEL5|VTI12_ARATH Vesicle transport v-SNARE 12; TrEMBL-Plants: tr|A0A1J7IVB9|A0A1J7IVB9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0300300
Domains
21
LotjaGi6g1v0185200_LC.2
– Membrin; TAIR: AT2G36900.1 membrin 11; Swiss-Prot: sp|Q9SJL6|MEM11_ARATH Membrin-11; TrEMBL-Plants: tr|V7BNW0|V7BNW0_PHAVU Membrin; Found in the gene: LotjaGi6g1v0185200_LC
Domains
12
LotjaGi6g1v0185200_LC.3
– Membrin; TAIR: AT2G36900.1 membrin 11; Swiss-Prot: sp|Q9SJL6|MEM11_ARATH Membrin-11; TrEMBL-Plants: tr|V7BNW0|V7BNW0_PHAVU Membrin; Found in the gene: LotjaGi6g1v0185200_LC
Domains
9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TRANSMEMBRANE Phobius 1 5.26