Domain Predictions — View

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PR00288

Source: PRINTS

Description

Purothionin signature

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0006952 View details of GO:0006952 AmiGO InterPro QuickGO	Biological process	Defense response	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.	Subterm of GO:0006950

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0253209.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Defensin precursor [Vigna unguiculata] gi\|225548306\|gb\|ACN93800.1\|	Domains G3DSA:3.30.30.10 IPR003614 IPR008176 NON_CYTOPLASMIC_DOMAIN PF00304 PR00288 PS00940 PTHR33147 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00505 SSF57095 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK TMhelix cd00107	18
Lj0g3v0276939.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Scorpion toxin-like knottin superfamily protein [Theobroma cacao] gi\|508712956\|gb\|EOY04853.1\|	Domains G3DSA:3.30.30.10 IPR003614 IPR008176 NON_CYTOPLASMIC_DOMAIN PF00304 PR00288 PS00940 PTHR33147 PTHR33147:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00505 SSF57095 TMhelix cd00107	17
Lj1g3v1382030.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: defensin-like protein 6-like [Glycine max] gi\|356516435\|ref\|XP_003526900.1\|	Domains G3DSA:3.30.30.10 IPR003614 IPR008176 NON_CYTOPLASMIC_DOMAIN PF00304 PR00288 PS00940 PTHR33147 PTHR33147:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00505 SSF57095 SignalP-noTM_EUK cd00107	17
Lj4g3v2858510.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Scorpion toxin-like knottin superfamily protein [Theobroma cacao] gi\|508712956\|gb\|EOY04853.1\|	Domains G3DSA:3.30.30.10 IPR003614 IPR008176 NON_CYTOPLASMIC_DOMAIN PF00304 PR00288 PTHR33147 PTHR33147:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00505 SSF57095 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK cd00107	17
LotjaGi1g1v0328600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Defensin-like family protein; TAIR: AT5G63660.1 Scorpion toxin-like knottin superfamily protein; Swiss-Prot: sp\|Q9FFP8\|DEF06_ARATH Defensin-like protein 6; TrEMBL-Plants: tr\|A0A061EJM1\|A0A061EJM1_THECC Scorpion toxin-like knottin superfamily protein; Found in the gene: LotjaGi1g1v0328600_LC	Domains G3DSA:3.30.30.10 IPR003614 IPR008176 IPR036574 NON_CYTOPLASMIC_DOMAIN PF00304 PR00288 PS00940 PTHR33147 PTHR33147:SF58 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00505 SSF57095 TMhelix	17

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TMhelix	TMHMM	1	20.00