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Class IA and IB cytochrome C signature
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Electron transfer activity | Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. | ||
Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: cytochrome c-like [Cucumis sativus] gi|449457373|ref|XP_004146423.1| | 9 | ||
– | Cytochrome c [Medicago truncatula] gi|357481261|ref|XP_003610916.1| | 7 | ||
– | Cytochrome c; TAIR: AT4G10040.1 cytochrome c-2; Swiss-Prot: sp|P00051|CYC_CUCMA Cytochrome c; TrEMBL-Plants: tr|I3T359|I3T359_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0489900 | 10 | ||
– | Cytochrome c; TAIR: AT4G10040.1 cytochrome c-2; Swiss-Prot: sp|P00052|CYC_VIGRR Cytochrome c; TrEMBL-Plants: tr|I3SL85|I3SL85_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0446000 | 10 | ||
– | Cytochrome c; TAIR: AT4G10040.1 cytochrome c-2; Swiss-Prot: sp|P00051|CYC_CUCMA Cytochrome c; TrEMBL-Plants: tr|I3T359|I3T359_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0216000 | 10 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
SSF46626 | SUPERFAMILY | 1 | 20.00 |