Domain Predictions — View

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PR01216

Source: PRINTS

Description

Adhesive plaque protein signature

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0005576 View details of GO:0005576 AmiGO InterPro QuickGO	Cellular component	Extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.	Subterm of GO:0005575

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
Lj3g3v0462220.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RecName: Full=Repetitive proline-rich cell wall protein 2; Flags: Precursorgi\|410107\|gb\|AAA62447.1\| cell wall proline-rich protein [Medicago truncatula] gi\|3914458\|sp\|Q40375.1\|PRP2_MEDTR	Domains IPR002964 IPR003883 NON_CYTOPLASMIC_DOMAIN PF02095 PR01216 PTHR32093 PTHR32093:SF16 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK mobidb-lite	14
LotjaGi3g1v0055400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Repetitive proline-rich cell wall protein; TAIR: AT3G22142.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Swiss-Prot: sp\|Q40375\|PRP2_MEDTR Repetitive proline-rich cell wall protein 2; TrEMBL-Plants: tr\|A0A1J7I059\|A0A1J7I059_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0055400	Domains IPR002964 IPR003883 NON_CYTOPLASMIC_DOMAIN PF02095 PR01216 PTHR34629 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM SignalP-noTM mobidb-lite	13
LotjaGi3g1v0055400.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Repetitive proline-rich cell wall protein; TAIR: AT3G22142.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Swiss-Prot: sp\|Q40375\|PRP2_MEDTR Repetitive proline-rich cell wall protein 2; TrEMBL-Plants: tr\|A0A1J7I059\|A0A1J7I059_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0055400	Domains IPR002964 IPR003883 NON_CYTOPLASMIC_DOMAIN PF02095 PR01216 PTHR34629 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM SignalP-noTM mobidb-lite	13
LotjaGi3g1v0055400.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Repetitive proline-rich cell wall protein; TAIR: AT3G22142.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Swiss-Prot: sp\|Q40375\|PRP2_MEDTR Repetitive proline-rich cell wall protein 2; TrEMBL-Plants: tr\|A0A1J7I059\|A0A1J7I059_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0055400	Domains IPR002964 IPR003883 NON_CYTOPLASMIC_DOMAIN PF02095 PR01216 PTHR34629 PTHR34629:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM SignalP-noTM mobidb-lite	14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	25.00