Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PS01054

Source: ProSitePatterns

Description

Transaldolase signature 1.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0005975 View details of GO:0005975 AmiGO InterPro QuickGO	Biological process	Carbohydrate metabolic process	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.	Subterm of GO:0044238 GO:0071704

Associated Lotus transcripts 9

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v3329130.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: transaldolase-like [Cicer arietinum] gi\|502090152\|ref\|XP_004489137.1\|	Domains G3DSA:3.20.20.70 IPR001585 IPR013785 IPR018225 PF00923 PS01054 PTHR10683 PTHR10683:SF6 SSF51569	9
Lj1g3v3329130.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: transaldolase-like [Cicer arietinum] gi\|502090152\|ref\|XP_004489137.1\|	Domains G3DSA:3.20.20.70 IPR001585 IPR004732 IPR013785 IPR018225 MF_00493 PF00923 PIRSF036915 PS01054 PTHR10683 PTHR10683:SF6 SSF51569 TIGR00876 cd00955	14
Lj4g3v2871740.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: transaldolase-like [Glycine max] gi\|356512932\|ref\|XP_003525168.1\|	Domains G3DSA:3.20.20.70 IPR001585 IPR004732 IPR013785 IPR018225 MF_00493 NON_CYTOPLASMIC_DOMAIN PF00923 PS01054 PTHR10683 PTHR10683:SF6 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51569	16
Lj4g3v2871740.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: transaldolase-like [Cicer arietinum] gi\|502139560\|ref\|XP_004503815.1\|	Domains G3DSA:3.20.20.70 IPR001585 IPR004732 IPR013785 IPR018225 MF_00493 NON_CYTOPLASMIC_DOMAIN PF00923 PS01054 PTHR10683 PTHR10683:SF6 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51569	16
Lj4g3v2871740.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: transaldolase-like [Cicer arietinum] gi\|502139560\|ref\|XP_004503815.1\|	Domains G3DSA:3.20.20.70 IPR001585 IPR004732 IPR013785 IPR018225 MF_00493 NON_CYTOPLASMIC_DOMAIN PF00923 PS01054 PTHR10683 PTHR10683:SF6 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51569	16
LotjaGi1g1v0552500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transaldolase; TAIR: AT5G13420.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp\|A9WT40\|TAL_RENSM Transaldolase; TrEMBL-Plants: tr\|I1KZJ0\|I1KZJ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0552500	Domains G3DSA:3.20.20.70 IPR001585 IPR004732 IPR013785 IPR018225 MF_00493 PF00923 PIRSF036915 PS01054 PTHR10683 PTHR10683:SF19 SSF51569 TIGR00876 cd00955	14
LotjaGi1g1v0552500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transaldolase; TAIR: AT5G13420.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp\|A9WT40\|TAL_RENSM Transaldolase; TrEMBL-Plants: tr\|I1KZJ0\|I1KZJ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0552500	Domains G3DSA:3.20.20.70 IPR001585 IPR004732 IPR013785 IPR018225 MF_00493 PF00923 PIRSF036915 PS01054 PTHR10683 PTHR10683:SF19 SSF51569 TIGR00876 cd00955	14
LotjaGi4g1v0422700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transaldolase; TAIR: AT5G13420.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp\|Q829U5\|TAL2_STRAW Transaldolase 2; TrEMBL-Plants: tr\|K7KRC0\|K7KRC0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0422700	Domains G3DSA:3.20.20.70 IPR001585 IPR004732 IPR013785 IPR018225 MF_00493 NON_CYTOPLASMIC_DOMAIN PF00923 PIRSF036915 PS01054 PTHR10683 PTHR10683:SF33 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51569 TIGR00876 cd00955	19
LotjaGi4g1v0422700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transaldolase; TAIR: AT5G13420.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp\|A9WT40\|TAL_RENSM Transaldolase; TrEMBL-Plants: tr\|K7KRC0\|K7KRC0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0422700	Domains G3DSA:3.20.20.70 IPR001585 IPR004732 IPR013785 IPR018225 MF_00493 NON_CYTOPLASMIC_DOMAIN PF00923 PIRSF036915 PS01054 PTHR10683 PTHR10683:SF33 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51569 TIGR00876 cd00955	19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd00955	CDD	1	11.11