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PS51386

Source: ProSiteProfiles

Description

RINT1/TIP20 domain profile.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005783
Cellular component Endoplasmic reticulum The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
Subterm of
Part of
GO:0048193
Biological process Golgi vesicle transport The directed movement of substances into, out of or within the Golgi apparatus, mediated by vesicles.
Subterm of

Associated Lotus transcripts 10

Transcript Name Description Predicted domains Domain count
Lj1g3v3464960.1
– PREDICTED: RINT1-like protein-like [Glycine max] gi|356510640|ref|XP_003524045.1|
Domains
6
Lj2g3v2997270.1
– RINT-1 / TIP-1 family protein [Arabidopsis thaliana] gi|30680623|ref|NP_172316.2|
Domains
5
Lj2g3v2997270.2
– RINT-1 / TIP-1 family protein [Arabidopsis thaliana] gi|30680623|ref|NP_172316.2|
Domains
5
LotjaGi1g1v0583600.1
– 30S ribosomal protein S15; TAIR: AT3G47700.1 RINT-1 / TIP-1 family; Swiss-Prot: sp|Q9STU3|MAG2_ARATH RINT1-like protein MAG2; TrEMBL-Plants: tr|A0A1J7GL55|A0A1J7GL55_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0583600
Domains
6
LotjaGi1g1v0583600.2
– 30S ribosomal protein S15; TAIR: AT3G47700.1 RINT-1 / TIP-1 family; Swiss-Prot: sp|Q9STU3|MAG2_ARATH RINT1-like protein MAG2; TrEMBL-Plants: tr|A0A1J7GL55|A0A1J7GL55_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0583600
Domains
7
LotjaGi1g1v0583600.3
– 30S ribosomal protein S15; TAIR: AT3G47700.1 RINT-1 / TIP-1 family; Swiss-Prot: sp|Q9STU3|MAG2_ARATH RINT1-like protein MAG2; TrEMBL-Plants: tr|A0A1J7GL55|A0A1J7GL55_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0583600
Domains
6
LotjaGi6g1v0188400.1
– RINT-1/TIP-1 family protein; TAIR: AT1G08400.1 RINT-1 / TIP-1 family; Swiss-Prot: sp|Q8GXP1|MAG2L_ARATH RINT1-like protein MAG2L; TrEMBL-Plants: tr|V7BJQ4|V7BJQ4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0188400
Domains
4
LotjaGi6g1v0188400.2
– RINT-1/TIP-1 family protein; TAIR: AT1G08400.1 RINT-1 / TIP-1 family; Swiss-Prot: sp|Q8GXP1|MAG2L_ARATH RINT1-like protein MAG2L; TrEMBL-Plants: tr|A0A0R0E6T9|A0A0R0E6T9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0188400
Domains
9
LotjaGi6g1v0188400.3
– RINT-1/TIP-1 family protein; TAIR: AT1G08400.1 RINT-1 / TIP-1 family; Swiss-Prot: sp|Q8GXP1|MAG2L_ARATH RINT1-like protein MAG2L; TrEMBL-Plants: tr|A0A072V5P0|A0A072V5P0_MEDTR RINT-1/TIP-1 family protein; Found in the gene: LotjaGi6g1v0188400
Domains
4
LotjaGi6g1v0188400.4
– RINT-1/TIP-1 family protein; TAIR: AT1G08400.1 RINT-1 / TIP-1 family; Swiss-Prot: sp|Q8GXP1|MAG2L_ARATH RINT1-like protein MAG2L; TrEMBL-Plants: tr|A0A0R0E6T9|A0A0R0E6T9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0188400
Domains
9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SIGNAL_PEPTIDE_N_REGION Phobius 1 10.00