Domain Predictions — View

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PS51413

Source: ProSiteProfiles

Description

DBINO domain profile.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0003677 View details of GO:0003677 AmiGO InterPro QuickGO	Molecular function	DNA binding	Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).	Subterm of GO:0003676

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0670100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA helicase INO80; TAIR: AT3G57300.1 DNA helicase INO80-like protein; Swiss-Prot: sp\|Q8RXS6\|INO80_ARATH DNA helicase INO80; TrEMBL-Plants: tr\|I1N8X6\|I1N8X6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0670100	Domains Coil G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR001650 IPR014001 IPR020838 IPR027417 IPR031047 IPR038718 PF00176 PF00271 PF13892 PS51192 PS51194 PS51413 PTHR45685 PTHR45685:SF2 SM00487 SM00490 SSF52540 cd18002 cd18793 mobidb-lite	24
LotjaGi1g1v0670100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA helicase INO80; TAIR: AT3G57300.1 DNA helicase INO80-like protein; Swiss-Prot: sp\|Q8RXS6\|INO80_ARATH DNA helicase INO80; TrEMBL-Plants: tr\|I1N8X6\|I1N8X6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0670100	Domains Coil G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR001650 IPR014001 IPR020838 IPR027417 IPR031047 IPR038718 PF00176 PF00271 PF13892 PS51192 PS51194 PS51413 PTHR45685 PTHR45685:SF2 SM00487 SM00490 SSF52540 cd18002 cd18793 mobidb-lite	24
LotjaGi1g1v0670100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA helicase; TAIR: AT3G57300.1 DNA helicase INO80-like protein; Swiss-Prot: sp\|Q8RXS6\|INO80_ARATH DNA helicase INO80; TrEMBL-Plants: tr\|I1N8X6\|I1N8X6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0670100	Domains Coil G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR001650 IPR014001 IPR020838 IPR027417 IPR031047 IPR038718 PF00176 PF00271 PF13892 PS51192 PS51194 PS51413 PTHR45685 PTHR45685:SF2 SM00487 SM00490 SSF52540 cd18002 cd18793 mobidb-lite	24
LotjaGi1g1v0670100.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA helicase; TAIR: AT3G57300.1 DNA helicase INO80-like protein; Swiss-Prot: sp\|Q8RXS6\|INO80_ARATH DNA helicase INO80; TrEMBL-Plants: tr\|I1N8X6\|I1N8X6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0670100	Domains Coil G3DSA:3.40.50.10810 G3DSA:3.40.50.300 IPR000330 IPR001650 IPR014001 IPR020838 IPR027417 IPR031047 IPR038718 PF00176 PF00271 PF13892 PS51192 PS51194 PS51413 PTHR45685 PTHR45685:SF2 SM00487 SM00490 SSF52540 cd18002 cd18793 mobidb-lite	24

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	25.00