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IPR000330

Description

IPR000330 is a SNF2, N-terminal.

<p>This domain is found in proteins involved in a variety of processes including transcription regulation (e.g., SNF2, STH1, brahma, MOT1), DNA repair (e.g., ERCC6, RAD16, RAD5), DNA recombination (e.g., RAD54), and chromatin unwinding (e.g., ISWI) as well as a variety of other proteins with little functional information (e.g., lodestar, ETL1) [[cite:PUB00014473], [cite:PUB00014474], [cite:PUB00095659]]. SNF2 functions as the ATPase component of the SNF2/SWI multisubunit complex, which utilises energy derived from ATP hydrolysis to disrupt histone-DNA interactions, resulting in the increased accessibility of DNA to transcription factors [[cite:PUB00096999]].</p> <p>Proteins that contain this domain appear to be distantly related to the DEAX box helicases.</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

Associated Lotus transcripts 155

Transcript Name Description Predicted domains Domain count
DNA/RNA helicase protein isoform 1 [Theobroma cacao] gi|508786331|gb|EOY33587.1| 15
DNA/RNA helicase protein isoform 1 [Theobroma cacao] gi|508786331|gb|EOY33587.1| 15
PREDICTED: DNA repair protein rhp26-like [Cicer arietinum] gi|502114921|ref|XP_004495082.1| 18
PREDICTED: F-box protein At3g54460-like [Glycine max] gi|356541572|ref|XP_003539248.1| 28
PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Cicer arietinum] gi|502111276|ref|XP_004494007.1| 8
DNA repair and recombination protein RAD54-like protein [Medicago truncatula] gi|357492817|ref|XP_003616697.1| 17
PREDICTED: helicase SWR1-like [Glycine max] gi|356577572|ref|XP_003556898.1| 11
PREDICTED: helicase SWR1-like [Glycine max] gi|356577572|ref|XP_003556898.1| 9
DNA repair and recombination protein RAD54-like protein [Medicago truncatula] gi|357503527|ref|XP_003622052.1| 17
PREDICTED: DNA repair protein rhp54-like [Glycine max] gi|356544159|ref|XP_003540522.1| 6
Helicase protein with RING/U-box domain [Theobroma cacao] gi|508714076|gb|EOY05973.1| 31
PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Glycine max] gi|356519100|ref|XP_003528212.1| 21
PREDICTED: chromatin structure-remodeling complex protein SYD-like isoform X2 [Cicer arietinum] gi|502151178|ref|XP_004508316.1| 9
PREDICTED: DNA repair and recombination protein RAD54-like isoform X2 [Cicer arietinum] gi|502158798|ref|XP_004511285.1| 16
PREDICTED: DNA repair and recombination protein RAD54-like isoform X2 [Cicer arietinum] gi|502158798|ref|XP_004511285.1| 16
PREDICTED: DNA repair and recombination protein RAD54-like isoform X2 [Cicer arietinum] gi|502158798|ref|XP_004511285.1| 16
PREDICTED: transcription regulatory protein SNF2-like [Glycine max] gi|356541302|ref|XP_003539117.1| 20
DNA repair protein RAD5 [Medicago truncatula] gi|357509293|ref|XP_003624935.1| 20
PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like isoform X2 [Cicer arietinum] gi|502132460|ref|XP_004501371.1| 37
PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Glycine max] gi|356515042|ref|XP_003526210.1| 39
PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like isoform X2 [Cicer arietinum] gi|502132460|ref|XP_004501371.1| 29
PREDICTED: ATP-dependent helicase BRM-like [Glycine max] gi|356568407|ref|XP_003552402.1| 22
PREDICTED: ATP-dependent helicase BRM-like [Glycine max] gi|356568407|ref|XP_003552402.1| 18
PREDICTED: transcriptional regulator ATRX-like [Cicer arietinum] gi|502178492|ref|XP_004516267.1| 9
DNA repair protein RAD5 [Medicago truncatula] gi|357509293|ref|XP_003624935.1| 29
PREDICTED: DNA helicase INO80-like isoform 2 [Glycine max] gi|356572004|ref|XP_003554160.1| 16
PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Cicer arietinum] gi|502111276|ref|XP_004494007.1| 26
PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max] gi|356495411|ref|XP_003516571.1| 18
DNA repair protein rhp54 [Aegilops tauschii] gi|475601294|gb|EMT24776.1| 16
PREDICTED: E3 ubiquitin-protein ligase SHPRH-like isoform X1 [Cicer arietinum] gi|502095665|ref|XP_004490508.1| 30
PREDICTED: E3 ubiquitin-protein ligase SHPRH-like isoform X1 [Cicer arietinum] gi|502095665|ref|XP_004490508.1| 29
DNA repair and recombination protein RAD54-like protein [Medicago truncatula] gi|357492817|ref|XP_003616697.1| 17
PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine max] gi|356554106|ref|XP_003545390.1| 21
PREDICTED: transcriptional regulator ATRX-like [Cicer arietinum] gi|502178492|ref|XP_004516267.1| 16
PREDICTED: ATP-dependent helicase BRM-like [Glycine max] gi|356560792|ref|XP_003548671.1| 23
PREDICTED: ATP-dependent helicase rhp16-like isoform X1 [Cicer arietinum] gi|502145992|ref|XP_004506272.1| 12
PREDICTED: ATP-dependent helicase rhp16-like isoform X1 [Cicer arietinum] gi|502145992|ref|XP_004506272.1| 28
PREDICTED: ATP-dependent helicase rhp16-like isoform X1 [Cicer arietinum] gi|502145992|ref|XP_004506272.1| 28
PREDICTED: ATP-dependent helicase rhp16-like isoform X1 [Cicer arietinum] gi|502145992|ref|XP_004506272.1| 12
PREDICTED: TATA-binding protein-associated factor 172-like [Glycine max] gi|356543311|ref|XP_003540105.1| 17
PREDICTED: TATA-binding protein-associated factor 172-like [Glycine max] gi|356543311|ref|XP_003540105.1| 16
PREDICTED: TATA-binding protein-associated factor 172-like [Glycine max] gi|356543311|ref|XP_003540105.1| 22
PREDICTED: DNA repair protein rhp54-like [Glycine max] gi|356544159|ref|XP_003540522.1| 9
Chromatin remodeling complex subunit [Theobroma cacao] gi|508704985|gb|EOX96881.1| 42
PREDICTED: DNA repair protein RAD5-like [Cicer arietinum] gi|502077783|ref|XP_004485743.1| 27
PREDICTED: TATA-binding protein-associated factor 172-like [Glycine max] gi|356543311|ref|XP_003540105.1| 16
PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like isoform X1 [Cicer arietinum] gi|502150689|ref|XP_004508075.1| 14
PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like isoform X1 [Cicer arietinum] gi|502150689|ref|XP_004508075.1| 15
Chromatin remodeling complex subunit [Medicago truncatula] gi|357447407|ref|XP_003593979.1| 32
PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max] gi|356527520|ref|XP_003532357.1| 17
PREDICTED: helicase SRCAP-like [Cicer arietinum] gi|502122805|ref|XP_004497900.1| 26
PREDICTED: DNA repair protein rhp26-like [Cicer arietinum] gi|502114921|ref|XP_004495082.1| 18
PREDICTED: DNA repair protein rhp26-like [Cicer arietinum] gi|502114921|ref|XP_004495082.1| 18
Transcriptional regulator ATRX [Medicago truncatula] gi|357441417|ref|XP_003590986.1| 13
PREDICTED: transcriptional regulator ATRX-like [Cicer arietinum] gi|502116778|ref|XP_004495589.1| 17
PREDICTED: ATP-dependent helicase rhp16-like isoform X1 [Cicer arietinum] gi|502145992|ref|XP_004506272.1| 12
PREDICTED: DNA repair protein rhp54-like [Glycine max] gi|356544159|ref|XP_003540522.1| 17
PREDICTED: DNA repair protein rhp54-like [Glycine max] gi|356544159|ref|XP_003540522.1| 16
PREDICTED: transcription regulatory protein SNF2-like [Glycine max] gi|356534230|ref|XP_003535660.1| 21
PREDICTED: ATP-dependent helicase ULS1-like [Glycine max] gi|356574101|ref|XP_003555190.1| 12
PREDICTED: ATP-dependent helicase ULS1-like [Glycine max] gi|356574101|ref|XP_003555190.1| 12
Switch 2 [Theobroma cacao] gi|508707557|gb|EOX99453.1| 17
PREDICTED: chromatin structure-remodeling complex protein SYD-like isoform X2 [Cicer arietinum] gi|502151178|ref|XP_004508316.1| 16
Chromatin remodeling complex subunit [Medicago truncatula] gi|357447407|ref|XP_003593979.1| 34
PREDICTED: DNA repair protein RAD5-like [Cicer arietinum] gi|502077783|ref|XP_004485743.1| 28
PREDICTED: DNA repair protein RAD5-like [Cicer arietinum] gi|502077783|ref|XP_004485743.1| 28
PREDICTED: DNA repair protein RAD5-like [Cicer arietinum] gi|502077783|ref|XP_004485743.1| 28
Chromodomain helicase-DNA-binding protein; TAIR: AT2G13370.1 chromatin remodeling 5; Swiss-Prot: sp|F4IV99|CHR5_ARATH Protein CHROMATIN REMODELING 5; TrEMBL-Plants: tr|I1JIZ0|I1JIZ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0048100 34
Chromodomain helicase-DNA-binding protein; TAIR: AT2G13370.1 chromatin remodeling 5; Swiss-Prot: sp|F4IV99|CHR5_ARATH Protein CHROMATIN REMODELING 5; TrEMBL-Plants: tr|I1JIZ0|I1JIZ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0048100 34
SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT5G20420.1 chromatin remodeling 42; Swiss-Prot: sp|F4K493|CLSY2_ARATH SNF2 domain-containing protein CLASSY 2; TrEMBL-Plants: tr|A0A0B2SWE1|A0A0B2SWE1_GLYSO DNA repair protein rhp54; Found in the gene: LotjaGi1g1v0073900 20
PHD finger protein family; TAIR: AT2G40770.1 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Swiss-Prot: sp|Q149N8|SHPRH_HUMAN E3 ubiquitin-protein ligase SHPRH; TrEMBL-Plants: tr|A0A1J7GV35|A0A1J7GV35_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0130300_LC 14
SNF2 helicase; TAIR: AT2G40770.1 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Swiss-Prot: sp|Q149N8|SHPRH_HUMAN E3 ubiquitin-protein ligase SHPRH; TrEMBL-Plants: tr|A0A151U027|A0A151U027_CAJCA E3 ubiquitin-protein ligase SHPRH; Found in the gene: LotjaGi1g1v0130300_LC 8
SNF2 domain protein/helicase domain protein; TAIR: AT2G40770.1 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Swiss-Prot: sp|Q7TPQ3|SHPRH_MOUSE E3 ubiquitin-protein ligase SHPRH; TrEMBL-Plants: tr|A0A0S3RM84|A0A0S3RM84_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0130800_LC 8
SNF2 domain protein/helicase domain protein; TAIR: AT2G40770.1 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Swiss-Prot: sp|Q7TPQ3|SHPRH_MOUSE E3 ubiquitin-protein ligase SHPRH; TrEMBL-Plants: tr|A0A0S3RM84|A0A0S3RM84_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0130800_LC 8
SNF2 domain protein/helicase domain protein; TAIR: AT2G40770.1 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Swiss-Prot: sp|Q7TPQ3|SHPRH_MOUSE E3 ubiquitin-protein ligase SHPRH; TrEMBL-Plants: tr|A0A0S3RM84|A0A0S3RM84_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0130800_LC 8
SNF2 domain protein/helicase domain protein; TAIR: AT2G40770.1 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Swiss-Prot: sp|Q7TPQ3|SHPRH_MOUSE E3 ubiquitin-protein ligase SHPRH; TrEMBL-Plants: tr|A0A0S3RM84|A0A0S3RM84_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0130800_LC 8
E3 ubiquitin-protein ligase SHPRH; TAIR: AT2G40770.1 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Swiss-Prot: sp|Q149N8|SHPRH_HUMAN E3 ubiquitin-protein ligase SHPRH; TrEMBL-Plants: tr|I1JH54|I1JH54_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0131200 31
E3 ubiquitin-protein ligase SHPRH; TAIR: AT2G40770.1 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Swiss-Prot: sp|Q149N8|SHPRH_HUMAN E3 ubiquitin-protein ligase SHPRH; TrEMBL-Plants: tr|I1JH54|I1JH54_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0131200 31
E3 ubiquitin-protein ligase SHPRH; TAIR: AT2G40770.1 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Swiss-Prot: sp|Q149N8|SHPRH_HUMAN E3 ubiquitin-protein ligase SHPRH; TrEMBL-Plants: tr|I1JH54|I1JH54_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0131200 31
DNA/RNA helicase protein; TAIR: AT5G07810.1 SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein; Swiss-Prot: sp|Q6NZP1|ZRAB3_MOUSE DNA annealing helicase and endonuclease ZRANB3; TrEMBL-Plants: tr|V7CJZ0|V7CJZ0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0191200 24
Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.2 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr|A0A151TT78|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800 46
Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.1 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr|A0A151TT78|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800 46
Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.2 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr|A0A151TT78|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800 46
ATP-dependent helicase BRM; TAIR: AT2G46020.2 transcription regulatory protein SNF2; Swiss-Prot: sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM; TrEMBL-Plants: tr|I1N3S1|I1N3S1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0478100 31
ATP-dependent helicase family protein; TAIR: AT2G46020.2 transcription regulatory protein SNF2; Swiss-Prot: sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM; TrEMBL-Plants: tr|I1N3S1|I1N3S1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0478100 30
SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT1G05490.1 chromatin remodeling 31; Swiss-Prot: sp|F4I8S3|CLSY3_ARATH SNF2 domain-containing protein CLASSY 3; TrEMBL-Plants: tr|V7B8F7|V7B8F7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0598000_LC 19
DNA/RNA helicase protein; TAIR: AT1G05490.1 chromatin remodeling 31; Swiss-Prot: sp|F4I8S3|CLSY3_ARATH SNF2 domain-containing protein CLASSY 3; TrEMBL-Plants: tr|A0A1J7HMG2|A0A1J7HMG2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0598100 19
DNA helicase; TAIR: AT2G44980.2 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp|F4IV45|CHR10_ARATH Probable helicase CHR10; TrEMBL-Plants: tr|A0A072TZ28|A0A072TZ28_MEDTR Nodule-specific Glycine Rich Peptide; Found in the gene: LotjaGi1g1v0599800_LC 10
DNA helicase; TAIR: AT2G44980.2 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp|F4IV45|CHR10_ARATH Probable helicase CHR10; TrEMBL-Plants: tr|A0A072TZ28|A0A072TZ28_MEDTR Nodule-specific Glycine Rich Peptide; Found in the gene: LotjaGi1g1v0599800_LC 9
Helicase, putative; TAIR: AT2G44980.2 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp|F4IV45|CHR10_ARATH Probable helicase CHR10; TrEMBL-Plants: tr|A0A072TYC3|A0A072TYC3_MEDTR Nodule-specific Glycine Rich Peptide; Found in the gene: LotjaGi1g1v0599800_LC 11
DNA helicase; TAIR: AT2G44980.2 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp|F4IV45|CHR10_ARATH Probable helicase CHR10; TrEMBL-Plants: tr|A0A072TZ28|A0A072TZ28_MEDTR Nodule-specific Glycine Rich Peptide; Found in the gene: LotjaGi1g1v0599800_LC 9
Helicase, putative; TAIR: AT2G44980.3 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp|F4IV45|CHR10_ARATH Probable helicase CHR10; TrEMBL-Plants: tr|K7K2G5|K7K2G5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0599800_LC 21
DNA/RNA helicase; TAIR: AT5G05130.1 DNA/RNA helicase protein; Swiss-Prot: sp|Q9FF61|SM3L1_ARATH Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; TrEMBL-Plants: tr|G7L5V8|G7L5V8_MEDTR DNA/RNA helicase; Found in the gene: LotjaGi1g1v0660800 32
DNA helicase INO80; TAIR: AT3G57300.1 DNA helicase INO80-like protein; Swiss-Prot: sp|Q8RXS6|INO80_ARATH DNA helicase INO80; TrEMBL-Plants: tr|I1N8X6|I1N8X6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0670100 24
DNA helicase INO80; TAIR: AT3G57300.1 DNA helicase INO80-like protein; Swiss-Prot: sp|Q8RXS6|INO80_ARATH DNA helicase INO80; TrEMBL-Plants: tr|I1N8X6|I1N8X6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0670100 24
DNA helicase; TAIR: AT3G57300.1 DNA helicase INO80-like protein; Swiss-Prot: sp|Q8RXS6|INO80_ARATH DNA helicase INO80; TrEMBL-Plants: tr|I1N8X6|I1N8X6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0670100 24
DNA helicase; TAIR: AT3G57300.1 DNA helicase INO80-like protein; Swiss-Prot: sp|Q8RXS6|INO80_ARATH DNA helicase INO80; TrEMBL-Plants: tr|I1N8X6|I1N8X6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0670100 24
Chromatin remodeling factor; TAIR: AT1G08060.1 ATP-dependent helicase family protein; Swiss-Prot: sp|Q9M658|MOM1_ARATH Helicase protein MOM1; TrEMBL-Plants: tr|I1JPN1|I1JPN1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0690100 31
Chromatin remodeling factor; TAIR: AT1G08060.1 ATP-dependent helicase family protein; Swiss-Prot: sp|Q9M658|MOM1_ARATH Helicase protein MOM1; TrEMBL-Plants: tr|I1JPN1|I1JPN1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0690100 31
RING/U-box superfamily protein; TAIR: AT5G05130.1 DNA/RNA helicase protein; Swiss-Prot: sp|Q9FF61|SM3L1_ARATH Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; TrEMBL-Plants: tr|G7L5V8|G7L5V8_MEDTR DNA/RNA helicase; Found in the gene: LotjaGi1g1v0729100_LC 21
RING/U-box superfamily protein; TAIR: AT5G05130.1 DNA/RNA helicase protein; Swiss-Prot: sp|Q9FF61|SM3L1_ARATH Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; TrEMBL-Plants: tr|G7L5V8|G7L5V8_MEDTR DNA/RNA helicase; Found in the gene: LotjaGi1g1v0729100_LC 21
RING/U-box superfamily protein; TAIR: AT5G05130.1 DNA/RNA helicase protein; Swiss-Prot: sp|Q9FF61|SM3L1_ARATH Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; TrEMBL-Plants: tr|G7L5V8|G7L5V8_MEDTR DNA/RNA helicase; Found in the gene: LotjaGi1g1v0729100_LC 21
SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT2G16390.2 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp|Q9SIW2|CHR35_ARATH Protein CHROMATIN REMODELING 35; TrEMBL-Plants: tr|I1LVC4|I1LVC4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0781900 19
SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT2G16390.2 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp|Q9SIW2|CHR35_ARATH Protein CHROMATIN REMODELING 35; TrEMBL-Plants: tr|I1LVC4|I1LVC4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0781900 19
DNA/RNA helicase protein; TAIR: AT2G02090.1 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp|Q9ZUL5|CHR19_ARATH Protein CHROMATIN REMODELING 19; TrEMBL-Plants: tr|I1NCZ8|I1NCZ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0013900 19
DNA/RNA helicase protein; TAIR: AT5G66750.1 chromatin remodeling 1; Swiss-Prot: sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1; TrEMBL-Plants: tr|I1J8V7|I1J8V7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0390800 20
DNA/RNA helicase protein; TAIR: AT5G66750.1 chromatin remodeling 1; Swiss-Prot: sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1; TrEMBL-Plants: tr|I1J8V7|I1J8V7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0390800 20
DNA/RNA helicase protein; TAIR: AT5G66750.1 chromatin remodeling 1; Swiss-Prot: sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1; TrEMBL-Plants: tr|A0A0B2RWD8|A0A0B2RWD8_GLYSO ATP-dependent DNA helicase DDM1; Found in the gene: LotjaGi2g1v0390800 20
SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT1G05490.1 chromatin remodeling 31; Swiss-Prot: sp|F4I8S3|CLSY3_ARATH SNF2 domain-containing protein CLASSY 3; TrEMBL-Plants: tr|A0A1J7GYJ7|A0A1J7GYJ7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0418200_LC 19
DNA/RNA helicase protein; TAIR: AT3G06010.1 SNF2/Brahma-type chromatin-remodeling protein CHR12; Swiss-Prot: sp|F4J9M5|CHR12_ARATH Probable ATP-dependent DNA helicase CHR12; TrEMBL-Plants: tr|I1LFS4|I1LFS4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0457100 22
DNA repair/recombination protein; TAIR: AT3G19210.1 DNA repair/recombination protein; Swiss-Prot: sp|Q0PCS3|CHR25_ARATH Protein CHROMATIN REMODELING 25; TrEMBL-Plants: tr|K7K5N1|K7K5N1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0461900 20
SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT2G16390.2 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp|Q9SIW2|CHR35_ARATH Protein CHROMATIN REMODELING 35; TrEMBL-Plants: tr|A0A0B2RYY1|A0A0B2RYY1_GLYSO DNA repair protein rhp54; Found in the gene: LotjaGi3g1v0061600 19
SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein; TAIR: AT3G54460.1 SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein; Swiss-Prot: sp|Q9M1I1|FB304_ARATH F-box protein At3g54460; TrEMBL-Plants: tr|A0A0B2QMB3|A0A0B2QMB3_GLYSO F-box protein; Found in the gene: LotjaGi3g1v0111300 27
SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein; TAIR: AT3G54460.1 SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein; Swiss-Prot: sp|Q9M1I1|FB304_ARATH F-box protein At3g54460; TrEMBL-Plants: tr|A0A0B2QMB3|A0A0B2QMB3_GLYSO F-box protein; Found in the gene: LotjaGi3g1v0111300 33
DNA/RNA helicase; TAIR: AT5G22750.1 DNA/RNA helicase protein; Swiss-Prot: sp|Q9FNI6|SM3L2_ARATH Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; TrEMBL-Plants: tr|A0A072VAY9|A0A072VAY9_MEDTR DNA/RNA helicase; Found in the gene: LotjaGi3g1v0172500 29
DNA/RNA helicase; TAIR: AT5G22750.1 DNA/RNA helicase protein; Swiss-Prot: sp|Q9FNI6|SM3L2_ARATH Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; TrEMBL-Plants: tr|A0A072VAY9|A0A072VAY9_MEDTR DNA/RNA helicase; Found in the gene: LotjaGi3g1v0172500 29
DNA/RNA helicase; TAIR: AT1G05120.1 Helicase protein with RING/U-box domain-containing protein; Swiss-Prot: sp|P31244|RAD16_YEAST DNA repair protein RAD16; TrEMBL-Plants: tr|A0A1J7HBU3|A0A1J7HBU3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0187500_LC 11
ATP-dependent helicase BRM; TAIR: AT2G46020.2 transcription regulatory protein SNF2; Swiss-Prot: sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM; TrEMBL-Plants: tr|I1MKV5|I1MKV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0384500 31
ATP-dependent helicase family protein; TAIR: AT2G46020.2 transcription regulatory protein SNF2; Swiss-Prot: sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM; TrEMBL-Plants: tr|I1MKV5|I1MKV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0384500 31
DNA/RNA helicase protein; TAIR: AT1G03750.1 switch 2; Swiss-Prot: sp|F4I2H2|CHR9_ARATH Switch 2; TrEMBL-Plants: tr|A0A0B2R838|A0A0B2R838_GLYSO Putative DNA repair and recombination protein RAD26-like; Found in the gene: LotjaGi3g1v0452700 18
DNA/RNA helicase; TAIR: AT1G05120.1 Helicase protein with RING/U-box domain-containing protein; Swiss-Prot: sp|P79051|RHP16_SCHPO ATP-dependent helicase rhp16; TrEMBL-Plants: tr|A0A1J7HBU3|A0A1J7HBU3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0467700 28
DNA/RNA helicase protein; TAIR: AT1G02670.4 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|P79051|RHP16_SCHPO ATP-dependent helicase rhp16; TrEMBL-Plants: tr|A0A151RMT2|A0A151RMT2_CAJCA ATP-dependent helicase rhp16; Found in the gene: LotjaGi3g1v0469700 23
TATA-binding protein associated factor-like protein; TAIR: AT3G54280.1 ROOT GROWTH DEFECTIVE 3; Swiss-Prot: sp|B5BT18|BTAF1_ARATH TATA-binding protein-associated factor BTAF1; TrEMBL-Plants: tr|K7LS80|K7LS80_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0555700 24
TATA-binding protein associated factor-like protein; TAIR: AT3G54280.1 ROOT GROWTH DEFECTIVE 3; Swiss-Prot: sp|B5BT18|BTAF1_ARATH TATA-binding protein-associated factor BTAF1; TrEMBL-Plants: tr|K7LS80|K7LS80_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0555700 23
TATA-binding protein associated factor-like protein; TAIR: AT3G54280.1 ROOT GROWTH DEFECTIVE 3; Swiss-Prot: sp|B5BT18|BTAF1_ARATH TATA-binding protein-associated factor BTAF1; TrEMBL-Plants: tr|K7LS80|K7LS80_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0555700 24
Chromodomain-helicase-DNA-binding family protein; TAIR: AT5G44800.1 chromatin remodeling 4; Swiss-Prot: sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4; TrEMBL-Plants: tr|K7KPZ4|K7KPZ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0022000 46
SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT1G61140.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein; Swiss-Prot: sp|Q94BR5|CHR28_ARATH Helicase-like transcription factor CHR28; TrEMBL-Plants: tr|A0A1J7HC54|A0A1J7HC54_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0052100 25
Chromatin remodeling 1; TAIR: AT1G48310.1 chromatin remodeling factor18; Swiss-Prot: sp|Q9NZC9|SMAL1_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; TrEMBL-Plants: tr|K7LZ63|K7LZ63_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0316600 22
DNA/RNA helicase protein; TAIR: AT5G18620.2 chromatin remodeling factor17; Swiss-Prot: sp|F4JY24|CHR17_ARATH ISWI chromatin-remodeling complex ATPase CHR17; TrEMBL-Plants: tr|A0A1J7I094|A0A1J7I094_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0345700 37
DNA/RNA helicase protein; TAIR: AT5G18620.2 chromatin remodeling factor17; Swiss-Prot: sp|F4JY24|CHR17_ARATH ISWI chromatin-remodeling complex ATPase CHR17; TrEMBL-Plants: tr|I1KN24|I1KN24_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0345700 35
DNA/RNA helicase protein; TAIR: AT5G18620.2 chromatin remodeling factor17; Swiss-Prot: sp|F4JY24|CHR17_ARATH ISWI chromatin-remodeling complex ATPase CHR17; TrEMBL-Plants: tr|A0A1J7I094|A0A1J7I094_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0345700 35
DNA/RNA helicase protein; TAIR: AT5G18620.2 chromatin remodeling factor17; Swiss-Prot: sp|F4JY24|CHR17_ARATH ISWI chromatin-remodeling complex ATPase CHR17; TrEMBL-Plants: tr|A0A1J7I094|A0A1J7I094_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0345700 35
DNA/RNA helicase protein; TAIR: AT3G06400.2 chromatin-remodeling protein 11; Swiss-Prot: sp|Q8RWY3|ISW2_ARATH ISWI chromatin-remodeling complex ATPase CHR11; TrEMBL-Plants: tr|A0A1J7I094|A0A1J7I094_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0345700 19
Chromatin remodeling 1; TAIR: AT2G28290.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|F4IHS2|SYD_ARATH Chromatin structure-remodeling complex protein SYD; TrEMBL-Plants: tr|V7CA49|V7CA49_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0346800 27
DNA/RNA helicase protein; TAIR: AT5G63950.1 chromatin remodeling 24; Swiss-Prot: sp|Q8W103|CHR24_ARATH Protein CHROMATIN REMODELING 24; TrEMBL-Plants: tr|A0A0L9TIX7|A0A0L9TIX7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0411000 19
DNA repair protein-like protein; TAIR: AT2G18760.1 chromatin remodeling 8; Swiss-Prot: sp|Q9ZV43|CHR8_ARATH Protein CHROMATIN REMODELING 8; TrEMBL-Plants: tr|I1LYM1|I1LYM1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0157200 18
Helicase, putative; TAIR: AT2G28290.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|F4IHS2|SYD_ARATH Chromatin structure-remodeling complex protein SYD; TrEMBL-Plants: tr|U5G6B8|U5G6B8_POPTR Uncharacterized protein; Found in the gene: LotjaGi5g1v0247500_LC 11
SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT2G16390.2 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp|Q9SIW2|CHR35_ARATH Protein CHROMATIN REMODELING 35; TrEMBL-Plants: tr|I1LVC4|I1LVC4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0272200 19
DNA repair protein-like protein; TAIR: AT2G16390.1 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp|Q9SIW2|CHR35_ARATH Protein CHROMATIN REMODELING 35; TrEMBL-Plants: tr|I1LVC4|I1LVC4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0309100 18
DNA/RNA helicase protein; TAIR: AT3G06010.1 SNF2/Brahma-type chromatin-remodeling protein CHR12; Swiss-Prot: sp|F4J9M5|CHR12_ARATH Probable ATP-dependent DNA helicase CHR12; TrEMBL-Plants: tr|A0A0S3SMF5|A0A0S3SMF5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0316700 23
DNA/RNA helicase protein; TAIR: AT3G06010.1 SNF2/Brahma-type chromatin-remodeling protein CHR12; Swiss-Prot: sp|F4J9M5|CHR12_ARATH Probable ATP-dependent DNA helicase CHR12; TrEMBL-Plants: tr|K7LLB3|K7LLB3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0316700 23
DNA/RNA helicase protein; TAIR: AT3G06010.1 SNF2/Brahma-type chromatin-remodeling protein CHR12; Swiss-Prot: sp|F4J9M5|CHR12_ARATH Probable ATP-dependent DNA helicase CHR12; TrEMBL-Plants: tr|A0A0R0I5I9|A0A0R0I5I9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0316700 23
DNA/RNA helicase protein; TAIR: AT3G06010.1 SNF2/Brahma-type chromatin-remodeling protein CHR12; Swiss-Prot: sp|F4J9M5|CHR12_ARATH Probable ATP-dependent DNA helicase CHR12; TrEMBL-Plants: tr|A0A0L9TZW8|A0A0L9TZW8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0316700 23
DNA/RNA helicase protein; TAIR: AT3G06010.1 SNF2/Brahma-type chromatin-remodeling protein CHR12; Swiss-Prot: sp|F4J9M5|CHR12_ARATH Probable ATP-dependent DNA helicase CHR12; TrEMBL-Plants: tr|I1NGB6|I1NGB6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0316700 23
SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein; TAIR: AT1G50410.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein; Swiss-Prot: sp|Q94BR5|CHR28_ARATH Helicase-like transcription factor CHR28; TrEMBL-Plants: tr|A0A1J7GA61|A0A1J7GA61_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0354400 28
SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein; TAIR: AT1G50410.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein; Swiss-Prot: sp|Q94BR5|CHR28_ARATH Helicase-like transcription factor CHR28; TrEMBL-Plants: tr|A0A1J7GA61|A0A1J7GA61_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0354400 28
SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein; TAIR: AT1G50410.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein; Swiss-Prot: sp|Q94BR5|CHR28_ARATH Helicase-like transcription factor CHR28; TrEMBL-Plants: tr|K7N2N9|K7N2N9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0354400 28
DNA/RNA helicase protein; TAIR: AT5G43530.1 Helicase protein with RING/U-box domain-containing protein; Swiss-Prot: sp|Q9FIY7|SM3L3_ARATH Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3; TrEMBL-Plants: tr|A0A072VHP2|A0A072VHP2_MEDTR DNA repair helicase rad5,16, putative; Found in the gene: LotjaGi6g1v0006600 32
SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT2G16390.1 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp|Q9SIW2|CHR35_ARATH Protein CHROMATIN REMODELING 35; TrEMBL-Plants: tr|I1LVC4|I1LVC4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0190800 18
SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT2G16390.2 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp|Q9SIW2|CHR35_ARATH Protein CHROMATIN REMODELING 35; TrEMBL-Plants: tr|A0A0B2QHR2|A0A0B2QHR2_GLYSO DNA repair protein rhp54; Found in the gene: LotjaGi6g1v0190800 18
SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT2G16390.2 SNF2 domain-containing protein / helicase domain-containing protein; Swiss-Prot: sp|Q9SIW2|CHR35_ARATH Protein CHROMATIN REMODELING 35; TrEMBL-Plants: tr|I1LVC4|I1LVC4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0276700 20
DNA/RNA helicase protein; TAIR: AT3G06400.2 chromatin-remodeling protein 11; Swiss-Prot: sp|Q8RWY3|ISW2_ARATH ISWI chromatin-remodeling complex ATPase CHR11; TrEMBL-Plants: tr|I1M1D0|I1M1D0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0306600 37
DNA/RNA helicase protein; TAIR: AT3G06400.2 chromatin-remodeling protein 11; Swiss-Prot: sp|Q8RWY3|ISW2_ARATH ISWI chromatin-remodeling complex ATPase CHR11; TrEMBL-Plants: tr|A0A0B2RF13|A0A0B2RF13_GLYSO Putative chromatin-remodeling complex ATPase chain; Found in the gene: LotjaGi6g1v0306600 37
DNA/RNA helicase protein; TAIR: AT3G06400.1 chromatin-remodeling protein 11; Swiss-Prot: sp|Q8RWY3|ISW2_ARATH ISWI chromatin-remodeling complex ATPase CHR11; TrEMBL-Plants: tr|A0A0L9VFU7|A0A0L9VFU7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0306600 21
SNF2 domain-containing protein / helicase domain-containing protein; TAIR: AT1G61140.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein; Swiss-Prot: sp|Q94BR5|CHR28_ARATH Helicase-like transcription factor CHR28; TrEMBL-Plants: tr|K7MA23|K7MA23_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0336200 28

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 0.65