Domain Predictions — View

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PTHR10315:SF79

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0278800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase; TAIR: AT3G58040.1 seven in absentia of Arabidopsis 2; Swiss-Prot: sp\|Q9M2P4\|SINA2_ARATH E3 ubiquitin-protein ligase SINAT2; TrEMBL-Plants: tr\|H8WVC4\|H8WVC4_LOTJA E3 ubiquitin-protein ligase; Found in the gene: LotjaGi1g1v0278800	Domains G3DSA:2.60.210.10 G3DSA:3.30.40.10 IPR001841 IPR008974 IPR013010 IPR013083 IPR018121 PF03145 PS50089 PS51081 PTHR10315 PTHR10315:SF79 SSF49599 SSF57850 cd16571 mobidb-lite	16
LotjaGi1g1v0278800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase; TAIR: AT3G58040.1 seven in absentia of Arabidopsis 2; Swiss-Prot: sp\|Q9M2P4\|SINA2_ARATH E3 ubiquitin-protein ligase SINAT2; TrEMBL-Plants: tr\|H8WVC4\|H8WVC4_LOTJA E3 ubiquitin-protein ligase; Found in the gene: LotjaGi1g1v0278800	Domains G3DSA:2.60.210.10 G3DSA:3.30.40.10 IPR001841 IPR008974 IPR013010 IPR013083 IPR018121 PF03145 PS50089 PS51081 PTHR10315 PTHR10315:SF79 SSF49599 SSF57850 cd16571 mobidb-lite	16
LotjaGi1g1v0278800.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase; TAIR: AT3G58040.1 seven in absentia of Arabidopsis 2; Swiss-Prot: sp\|Q9M2P4\|SINA2_ARATH E3 ubiquitin-protein ligase SINAT2; TrEMBL-Plants: tr\|H8WVC4\|H8WVC4_LOTJA E3 ubiquitin-protein ligase; Found in the gene: LotjaGi1g1v0278800	Domains G3DSA:2.60.210.10 G3DSA:3.30.40.10 IPR001841 IPR008974 IPR013010 IPR013083 IPR018121 PF03145 PS50089 PS51081 PTHR10315 PTHR10315:SF79 SSF49599 SSF57850 cd16571 mobidb-lite	16
LotjaGi5g1v0117000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase; TAIR: AT3G58040.1 seven in absentia of Arabidopsis 2; Swiss-Prot: sp\|Q9M2P4\|SINA2_ARATH E3 ubiquitin-protein ligase SINAT2; TrEMBL-Plants: tr\|H8WVC7\|H8WVC7_LOTJA E3 ubiquitin-protein ligase; Found in the gene: LotjaGi5g1v0117000	Domains G3DSA:2.60.210.10 G3DSA:3.30.40.10 IPR008974 IPR013010 IPR013083 IPR018121 PF03145 PS51081 PTHR10315 PTHR10315:SF79 SSF49599	11
LotjaGi5g1v0117000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase; TAIR: AT3G58040.1 seven in absentia of Arabidopsis 2; Swiss-Prot: sp\|Q9M2P4\|SINA2_ARATH E3 ubiquitin-protein ligase SINAT2; TrEMBL-Plants: tr\|H8WVC7\|H8WVC7_LOTJA E3 ubiquitin-protein ligase; Found in the gene: LotjaGi5g1v0117000	Domains G3DSA:2.60.210.10 G3DSA:3.30.40.10 IPR001841 IPR008974 IPR013010 IPR013083 IPR018121 PF03145 PS50089 PS51081 PTHR10315 PTHR10315:SF79 SSF49599 cd16571	14
LotjaGi5g1v0117000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	E3 ubiquitin-protein ligase; TAIR: AT3G58040.1 seven in absentia of Arabidopsis 2; Swiss-Prot: sp\|Q9M2P4\|SINA2_ARATH E3 ubiquitin-protein ligase SINAT2; TrEMBL-Plants: tr\|H8WVC7\|H8WVC7_LOTJA E3 ubiquitin-protein ligase; Found in the gene: LotjaGi5g1v0117000	Domains G3DSA:2.60.210.10 G3DSA:3.30.40.10 IPR001841 IPR008974 IPR013010 IPR013083 IPR018121 PF03145 PS50089 PS51081 PTHR10315 PTHR10315:SF79 SSF49599 cd16571	14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd16571	CDD	1	16.67