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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0278800 |
| Transcript ID | LotjaGi1g1v0278800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | E3 ubiquitin-protein ligase; TAIR: AT3G58040.1 seven in absentia of Arabidopsis 2; Swiss-Prot: sp|Q9M2P4|SINA2_ARATH E3 ubiquitin-protein ligase SINAT2; TrEMBL-Plants: tr|H8WVC4|H8WVC4_LOTJA E3 ubiquitin-protein ligase; Found in the gene: LotjaGi1g1v0278800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:68163116..68173545) extracted from Lotus japonicus Gifu genome v1.2.
GATCTCTGGACCACCTTGTTGTCTTGGCAACGAATCGTTTCATTAGAGACGAGACCAGACAACAACAACGGAGACGAAGA AACAAGAAAGAACCCCAAAACATTATTTTATATTTTTTTATTCCACATTTATTTATTTCCCAAATCTCAAAAAAAATTCA AAAATAAAAAAAGAAACAAGAGAGAGAGAGAGAGAGAGAGAGATAAATAACACGAAAAAGGAACAGAGCGCAATTTCAAT TCAAGAGAAAGGTTTGATCCTGCGATTTCGAACGAAACATTGATTGTTCGTTCATGGTCAACAACAATCAACATCCCTAT CGATACGAACAAGACAAACCTTTTTCCTCTTCTTCAATCTCCGGTAATTTCCGTAACTCCCGGAATTTTGTTTTTCTAGT ACTTTGTGTCTCGATTTTCCTTCTTTTTTATTTTTCTTATATATGGCTTGGAATTCTCAACTGGGTATCTCTTTATATTT TAATTTTAATTTTTTGTTTACATCTTGGGTTTTTGTTTTTTCCTCTGATTGGTATGGTTTTTCAACTTTTCTGCCCAGAT TTGTACCTATTAGCCTATTTTGCACGCCTGGTTTTTGTTGCATTGTGATTCTATTTATGGGTATTGGTTGTTCTGCTTAT TTGCATGTCATAAATTGGTTGTTTTTCAGATATCATCACTTGATTTCTATTTTCTTTCAGCCCCTTGTTTGTTCCAGTTT TTGATTGGCTGGATGGAGTAGGAAAAGGTAGTATTCTGGCATAGCCAACTAGACTTGTACACTGTTTGGTTGAATTTCTG GGTTTTTTCTTTCTCATTTGGATATGTTATGTGGTGGAATTTATTTGTTTTCATGTTACTGTATCAGACACAAGGCACTC AGATGAGGATCACTGTTAGTGTATAGTAAGAGATTTCTTGTTGAGGATGTCTGTTTGAAAATTGATCTGGGTTTGTACTT TATCGTTATTATTTAGATGTGTGATTTTTGCTTTGTTTGTGTTATTTGTTCCATTCTCACCCCTTAAGGTGAAGAAGCTG CAGTTTGAAGCTTTCGATATCAATTTAACAATTTCATAGTAGTTTAGCTGTTGGAATGGCTCACTGTTTGGCAGCGAATA CAACATGTTCTACGTGTCTTCTAAGACATCTAGCAACTAGTGAAACATGTTGATTGGCATGTCATCTGCAATGCGAAAGA AATTTATGTTTCTGTTATGCTTAAATGGTTTTAATGTGAAATTTTTTTTTATGTTTATGCTATGCTTAAATGGTTTTAAT GTGAAAATTCTCATTTACTGAGTAATTTATCCATGTGGCAAGTCGAGGTTCAGTTTACAGATTGCATTTGGGGGTAACTT TGTTGTTTGATGTTATTCTTGTATTTCAGGCATATTTTCTTTTCTTGACTCTATGGATCTTGGAAAGTACTGCTAAAATT TAATTTTTATGTACATTCTAGTGTTAGCCAGAGACACTGGTGCATATGTATATCGTACCTGTGTTAAAGCTATCCAAGGA AACTCAATACACTCATTACTTACGTAAAAAAAGCATATTATAATTGTTCTTGCTTGTGTTTGCTTTTTTTGAAAAAAGTC TCTTAACCCCATATTTTGGACTAAAGTATGCCAGAGTTTGACTATAGTAGCATTTACCATGTAAAGTTCTTTTGGATTGA CAATTTACCTGTTTATCAGTTGTAGCATGCCATAAAAATATTCAAAGCAGATGAATTGAGCTAAAGTGGAGGAGATCTGG TTCCCACTTCCCAGTCATTTGGAAAGAAAGACTGCAGATCAGGGTCCATAATGGCTCCTGGAGGCGGTGTTTTCAAAGAA GTTCTTGAATCTCACCTGCTGTCTTCAGATTATGAAACAGGCAAAGCTAAATCTGAGGCCAAGAGTTCCAGTACATTTCC AAAATCTAGTGTTGGGTCGACTGGAAAGAATGAAATTAGTTCAAAGAATGGCGTGTATGACTTACTCAAGTGTCCTGTCT GCAAGAATTTGATGTATCCCCCAATTCACCAGGTGCAGTGCTTGATATTTCTCTTTCTTTTTGGAAAAGAAAAACCTTTC TCAAATGCATGATTGCACACATGAAATACATATAGGTAAAAAAATAGTGGCATTGTAATCCTTTATCTCTGTGATACATA GAGGATGGTTACAGTTGAAGATGATAAAACTTATTTGCTTATCCCTTCACTGCAAAGGCTCCATCATGCAACTTAACGCT GATGCATATCAAACCTCACTTTAGCAAACTTAATTTTTTGGACAATGTGGATTACTTTAGTCATTGATCTTGAGTGAGAA GATGAATGGAGAGATTGAAGGAGAGGATGAACCAATTCAATATCTTGAATCCTTGGGGTTTTATTATCATATTTATTTGT GAAGAGAGTTGCATGGAAGTTGTCCAAATTTGATAAAGGTAAATTAGTGAGTATTTTGGACTAATAGCAATAGCATCCTT TAGGATATGGGATAGGGAAATTACATAGAGACTAAGTTAGTTTGTTAGTAGGAGGGGTTTAGTTGGAGAAATAAATAGGG AATGTGAGGTTGGAGAGGCATTGATTCAGTTTTGTTACTTTGAGAAGGTAGAGTAGTGACTCAGATGCAAGTGGAAACTC TTGGAGGAGATTTCTCTCCTTTTCTGTTCATTCTTCTTATTCAATAACAAAAGATTCTTCCATTTCTAACTCCTGTGTTC CTAAAAATAACAAACAGATCATCTGGTTTATAGTTCTTTCATAGTCACTTTCTATTGTGCGTTTGGTTCAAATCATACTC ACAGGAATGTGGTTCATAAGGGACTGGTTGCTAGAACCTGCTGAAATATTTAATCATCATTTTCACTTTTACTTCATAGT TTTACTTTGAATTTATCAATTCTTGTAATTTTCTTCTAAACTTTAAATTTCTAATATTTGCTTTATGGCTGCATTGTGTG TTTCAGTGCCCAAATGGCCATACATTATGTTCCAATTGTAAGATTGAAGTCCATAATATCTGCCCAACCTGCGACCATGA TCTTGAGAATATAAGGTGTTTGGCTTTGGAGAAAGTGGCAGAATCTTTGGAGCTTCCTTGCAAATATCAGAGCCTAGGTT GTCATGATATATTCCCATACTATACTAAGCTTAAGCATGAGCAGAGTTGTGGATTTCGTCCATACAATTGCCCATATGCT GGATCTGAGTGCTCTGTGATGGGTGACCTTCCTACTCTCCTTGCCCATCTAAAGGATGATCACAAGGTTGACATGCATGA TGGATGCACCTTCAATCATCGATATGTCAAATCAAATCCACATGAAGTTGAGAATGCCACATGGATGCTAACTGTAAGTC ATTTAATGCATTATAATAGCTGGCCTGTATGATGACTTGATCTATTATGCCCTCAAATTATGTCTCATTCCCTGTCCACA AATAAAATTTTGGCATGTGAATTAAAAACCACAATGTAAGTTTGTAACTGCCCCACGTTTTTTAATCAAAATGACAAGAT TTTGTTGGTGGGGGCAGAAAATTGAGAAATCATTTGAGGAAAAAAGTTCTTGCTCCGATTACTATTTATCATATATTGGG TTTTTGCTTGTTATTGTTATAATGTCATGATTGGTTATTGGTAGACCGCAAAACAATATCTACACCCACAAACACCACTT TTTTCTCTCTATCTCTCTCTTCTTATCATACTACATCATATATCATATCTATCATTTCCCCCTCTTCTCTTCCTATCTCT ACACCAAAATGGTGTCCACCAAACATTATTGTATAATTTAATCGTTAAATCACTGGCATAGCTTAAATATATGGCATTAA TTGTGTACCAACATGGCCATACCTGTTTCTATTGAAAAAAGAAAAAGAAATCTACTTCTGTACTATTTTTAATTCCTTGC TGTAGTTATTGCGTAGTGCGTACCAGTTTGTTAATTATGTTTTTTGAGAAGGAGCTCACGAGCTATCACATCATGGGTCA CATGACGTAGCCATGTGTTCTTTTGACATTTGATGAACAATTTGAAGTTTTGAACACATCGACTTTACTTACAATTACAA AGTGCAAAGTGCTTTCCTCTTGGGTTTGCATCTGAACATATCCTAAGTCTATGCTGAGCTAACATGGGTTCACCTTTTGT CTGTTGAGTATCTGTGATCACATAATATGTTGTGACCTCATGATGTTATTGTCTACGCAAAGCCTAACATGAAAACCCCA CTAACATGTTGAACTCTCTTGCTTTCAGATTTTTAATAGTTTTGGGAGACACTTCTGCTTGCACTTTGAGGCATTCCAGA TTGGCACAGCTCCAGTTTACATGGCCTTTTTGCGGTTTTTGGGTGAGGACAGTGAAGCAAAGAAATTCAGCTACAGCTTG GAAGTTGGCGCAAATGGCCGCAAGCTTACATGGCAAGGAATTCCGAGGAGCATTCGTGACAGTCATCGGAAAGTTCGAGA TAGTCAAGATGGTCTTATAATTCAGAGGAACCTTGGCCTTTATTTTTCTGGTGGGGATAGACAGGAGTTGAAGCTGAGAA TCACAGGTCGTATATGGAAAGAAGAATGAGAGGTGTAAATGTAATATATTAGGGATGTCCACGTCCAAGCAATTATTGTA CACAACCTGCTACGATTGTTTTGAGATTTTGCTGTGTGCCAAAGAATGAAGCATCAGTGCTTTAACTTATATCTATATAT TCCCTTTCAATTACCTCACTTTATGTCGTACGTGTATGTTTGAATACTAGTTGTGTGCATTTGAATATCAGTGCAACGTG CAAATATTTTCATCTCAATTTACAAGTTGCATATATTTTCATCTCAATTTACAAGAAATTCATCCTTTTTTTCTTAAAGT GAATGCTAATATCTGTTTACATCGGTATTAAGTATTAACGAGTATCCAAACATAGCTAGCTTTAGAGAGTTCCCATCATT TTTCAAAATTGTGTGGTACAAGGTTACTTCCAATTTGCTCTTCAACTTTCTTTCCAAGGAAGCATGTGCTTCCCATATTG GTTAATCGAGGATGCTATAAGATTCTTGGGAAATTCAGGCAAGGAACACTATACTATTTAAAAGTATATACTGTGTTTGA TACGATAACCTTTTAAAGTCAAACTTATAGGAAAGAATTTAGGAATAGATCACACGCAGAAATTGATGAAGATCATCCAA GGGAGGGGTTTGGTGAAAACTAGTATATAGATCTTTTTTCCCTCTTCATTTTAATCCATAACTAGTTCATAGAAAAAAAA ATACATTAATATTAAACCATTCCAAATTCGGTTGGTTAAGAATAATTCTAAATCATTTTGTTTCTTCTAATTATTCTCCT AATAGTGCATTGCGTTGACTCATGCGACGCACGCGTTTGAAGTAAGCTTTCAATTAGTTAAAAATGATATCATAATGATA AAGAACAATTGACATATATAAATATGGAGCAAACAATATAGATGCCTTTATAAAAAAACTAGTTGCTATTAAAAATAAAC GTATATGATTGGACATCTATATTATTTTAACTGTCAGTGTTTAGTACTATACTCAATTATGAATATAATCAAAATCATTA TCTAACCATCTAACATCAAAATTAAACTAAACATAATAAACTTCCATCAATGACATGAGAATGTACACATTAGAACGCAC CAATTAGTGAAGCACACACATACATATTCCGGGATACCAAAAGGTCAAGACCTAGAATCCGATACAGACACAACTCAACA TGGCCAATTTAACAATTCACCAATCTCCAAGTAACCCTTTTTAAAAACTAGGCTAGACTTAGAAAGGAATCAATCAGTCA TACTATAAATTGTCCCTGTAGAAGAAAACTAGTAGCAAATCGATCACGCTCACCAAGAGATAATAGCACATTTAATCAAG GATATGACTAAATAGTAGTAGGTTTTAAATAAACTAATTTGTGTAGGAGACAATTAGAAAGCAAATCAATCACGTTCACC AAGACATATATTTTGTAGTTATACCATACCACATTTTATAAAGGATATGATTAATTAGCGAGTTTAATATAAACATCACG AGAGGTTGATCAATTCAAAACTTGAACCAACTTTAGGACAAAATTGAGAGAGAAAAAGAGAGAGATCACCAACTTAAATG AGTGAGTTGGGTCCCAAACCCCCACACAGCCCGTTGTCCTCTCCATAAGTTCTTGAACGTGCATACATCACATAAATCAT GCATTACATATTTACATTAATCAAAGTCTCAACCCTTATAACACATGTCCTAACCAATAAGGCAGTAGTAACCATAACAT ACGTCAATAAATACCCTAAACCCATAAGTCAGCAAGTCAAAATTTACAATTTATCAAGCCCAAGTTGCAAGGAGCTACTC ATATAATTTCAATTAAAAACTCTAAAAGTGATTCAGTTCAAGTGGAATAATGGCATCTGGGCTCATAACATCATTTTATC AAAGGTTAAACGATAATTCCCTGTGCATCATGGAAAATTTGAAAATAGGTTCCAACAACATTAAAATTTGTAATATAGTC CTACGGTTAGAAATTGAATTGGGCCTGTGAATTCACTCTAGGGCTATGGAGATATAATAATATTTCTTCTTTACCTAATT ACAAATCTTAAACTGAAGACCTATTTGAATTTTCTGAAAACAAAAAACAGACCTGTAATATCCCAAGGAAAAAGGACTGA TAGTTCATTCAGAGCATTAAAATCTGTGAACCAACCCTAGTTGAATGGATCAGAATTCAGACCCAACCTAACTCACAACC AAACCAACCCAGCATTTGTGTTTGTTTGAGAAGGTTTGCAGGTTGGCCCAAATTACTGAAGAGCCCCACGTAATCCTGTC ACATTGAAACACACCCAAGTACCCAACCAACACCCCATTGCAAAAAAGGAAATGAGTGGCAGCGGAAGGCATCAATTTAG ATACAGGCATGAGAAAAATGATTTTTCTGAAAGGATCAAACAGCCTTTCAGGTCAAGTAATACATCACCTTACATTAGTG GCAAAAGAATTGCACTCTAAAAGTCAGTATTTTCAAGTCTAAGAAAGGTTACCGCCAGATCTAGAGTAGTCAACTGGTGG AAAAATACTCAAAAAATGGGAATGTGGAACAACCAAAATTTTATAACATTGGTAAATATATCTAAGATGTCGTTCAAGAG TTATAGAACAGCTATTGATGAAGAATACATTTAGTAAAAGAAAGAAAAATACCACGTATCCATTCAAAGAGAAACAGGTG AACACAAAGAAGCAGCAAAATTACCCCACTAAACATCCCCATCAGCTACATAAGTATTTAGTGCTTGTCCTCCTTAGGAA TGTCTTTAGGAGGAACCTTTGTCTCCAGTTCTTTAGTGGACTTCTCAATTGTCCTGAAAAGAGAGCACAAAAAATATTAC AATGTGATAAAACTGGTTCAAAAATTGAAGGAAAACACTGGTTTTATTGAAAGAAAGAAAAAAACAAGATTGACAACACT CTTCTCAAAACTTTCGAGAAGTCTGGACTCTCCTGAGCTTATTCCTGGCTGAGTCAAAAGACCCCTCCCCTATTGTTAAG CAACATGTCTTATTCACCAATCTACCAACTAAATAACTCCCATTCGGTTATTACTCTATTGACTATTAAATAACTGTACC TAACAAAACTCCCCCTACCTAGGCCAGTGATGAAGTAGCACACATCACGTCAATGAACTGATGCGGCATAGGCCAGGTTC AACTAGAATAGGTGCGTGAAGTAGTTAATGGAGTTTGTGTTGCTGTATTCGGGTGAACAATGTTAATATCAGACTCGAAG TAGACGATTTGCCGGATGGTGGACAGAACCAGGCCAGTGAAGTTTTCAGGAGAGAAGGGAATGTGGAATTTTCATAATAC CTTCTTAGAGGGTGGAGTAGAATTTCACATTCCCTACTTTGGGCTACAAAATTATCCTATATAAAGTACTTAGTATTTTC TAAATTCTTTAATTTGATATCCAAACAAGATTTTACCACTAGGTCATTTAAAATCCACCAAATAAATACATTATCTAATT AAAATTCATTACCCAAACACAGTGAAAGTATTACCAATTACATTCTATCACCAAAATTGTGTTTTTAAAAAGGTGTACGC AGGTCATAATGAAATTTTACAGTCCTTTTTCCCTTCATCTTTCTTCAGTCATCAATAATTCAAACATAGGAAAGGAAAAT CTTTCTCAACAAGCTATTCCCTTTCGATTTTTATTCCCTCCCATCCCATCTCCTCCTCTCTACAACATCAAGACATAGTC TAACTGTCTAAGTATTAAAGAAGTGGTCAAGTGGGGAAACTACTTTAGGTTTGCTACCATTCTAATTTATAAGTTATAAC TTATAACTACACCATGCTTACTAGCTAAAAGGCAACCCATCCTCGTACACAAATCTACCATTCACACCCCATTCGATATG ACCAATATATTTAGTTAGCATCATCTCCAAGAGTGTAAATACTAAATAACCTTTCAGCAGAACTAAAACACCTTTCTGTC TGCCAAACAAGTTTGTCATATAAGTTGCCTAAAAAAAAATAATCACAAAACTAGAAAGTTTTCTAACTTTTAGATGTTGA ATAAACACCTTCCTTGGACTGCTTTATGTTTCAGAAAAATAAAATCGGAATATGAAGTTAAGAAAGAATGGAAGGAAGCA TCTGAATATATAAATGAATTCATATGAAAATATAAAACATCCAAAATGTAGCATTGCACAAATACCCTCACTGAAGAGAA CAAGCAATCGGACCCAAAGTCCTCAAATAATTATCTGAAAAGATTCATAGCTTACATATTTTTCAAGGGTTGACTTAATG GTCCAGCAGGTCATATGGAATCAGTACACAACTTTTTCCAAGTATACTCCTAATACTACCAATTTGAAAACCAACTAAAT ATATATGTGTGAAGTATTTAGCATGTTCGTTAATATTTTGGAGAGCTGTTTTATTTGAAAAGTAGGACGGACTAACCAAC AACAGTTGTTTTGTTTCCCTTCCTATCAACAGGAAAAGGTTGCATGATCTAGAGGCTACTGCTACAAAACTTTGTGACTC ATTGCTAAATCTCTATCAATTTATGAAGAGGCCACGTTATTTAGGATAATAATATAAGCTTGGTAAATTACAATAAACAA AAGGGGAAGCCATTCCAAAAAAACAAACTGAAAAGTTAAAGAACCATCAACAGCTGTGGGCTAAGTAACATGCAAGAGCA ATAGAAGAATTGCCATTACATTCATCATCCTCTTTCTATGTTTTATCATGGTTTAATGTTAAAAATAGTTGTAGTACACT TTATACCGTGACTCTCAAATTATGGTACTGATTCGTAAGAACTCCAAAAAATTATAAACTTGGTTCGAATGGTTAAATAT GTTCCTTTCGTCAGTAGCTCACCAACAAAAGGTAAATAGGACCCCACACCTAAGTGTCTGTTTGGTTTTCAATTAGGAAA TCCGTTTGAAGCATTGAAATTCGAAATCACGATTTCCAATGCACATTCAACCAACGGAATGCACTCGTTGGGTTTCACCC AACTGAAAACCAAACAGGCTCTAAATTCGCCTAAACCAAAACAACTTCAGTAGCACACTAATCAGCATAAGATTAAGGCA TCATGAATCGCTTACATAACTACACATAAGCAAGCACGCAGGCAAAAATGGCTAAGAATGAAAACAGTCATATACAATTT TGAATCCCCAATCAATGAATGAATCACGAAAACAGGGATGAGAATTCAGAAACATGAGAGATAGATAGATTGTGAAAAGA AGGAAGGAAGGAAGAACGCGCGTGTGTACTTACTTGGAAGAAGAGATGTTTTCTTCTTCGAGCCACTTGCGGATGTGCTT GACATTGCGCCTGAATATGGATGCAGATTGCTTCACGTCACTCCTCAGAAGAAGAACCACCGCGCTCACTCCGGCCACCG TCAGCACGAAATTCGTAATTCCCATGATTCCGAAATTCCACAGTCAGGGTTCTGCTTCTGCTTCTGCTTCTGCGCACAAA ATAGGAATTATTCTTTTTCCTCTTTTTTTGTTTTTGTTTTTGTTTTGAGAGAGAGTTGCAAGCAATCTCTATTTCTAAGC CCAAATGGAAGGAAGCCCAATACCGGCCGGTTCAACCGGGAACCAGGCCTTACACCGGTCCGGAACACTGTATAAACCTG TGTGTGACAGAGCAAACCGGAGATTCAGCGGTTTTACCGGTTCTTTATTTTGGCACGGATACGACGTCGTTTTCCAGTTT TGGAACTGAAAACACAGTGCAGCGGTGGCTTGCAATGGATGTTGTTAGAGGTTGAGGGAGTGAATGATCAAGATGAAAGA TGGAGAGATTTGGAGCAGCCTTTGTGGAAC
CDS sequence (LotjaGi1g1v0278800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCCTGGAGGCGGTGTTTTCAAAGAAGTTCTTGAATCTCACCTGCTGTCTTCAGATTATGAAACAGGCAAAGCTAA ATCTGAGGCCAAGAGTTCCAGTACATTTCCAAAATCTAGTGTTGGGTCGACTGGAAAGAATGAAATTAGTTCAAAGAATG GCGTGTATGACTTACTCAAGTGTCCTGTCTGCAAGAATTTGATGTATCCCCCAATTCACCAGTGCCCAAATGGCCATACA TTATGTTCCAATTGTAAGATTGAAGTCCATAATATCTGCCCAACCTGCGACCATGATCTTGAGAATATAAGGTGTTTGGC TTTGGAGAAAGTGGCAGAATCTTTGGAGCTTCCTTGCAAATATCAGAGCCTAGGTTGTCATGATATATTCCCATACTATA CTAAGCTTAAGCATGAGCAGAGTTGTGGATTTCGTCCATACAATTGCCCATATGCTGGATCTGAGTGCTCTGTGATGGGT GACCTTCCTACTCTCCTTGCCCATCTAAAGGATGATCACAAGGTTGACATGCATGATGGATGCACCTTCAATCATCGATA TGTCAAATCAAATCCACATGAAGTTGAGAATGCCACATGGATGCTAACTATTTTTAATAGTTTTGGGAGACACTTCTGCT TGCACTTTGAGGCATTCCAGATTGGCACAGCTCCAGTTTACATGGCCTTTTTGCGGTTTTTGGGTGAGGACAGTGAAGCA AAGAAATTCAGCTACAGCTTGGAAGTTGGCGCAAATGGCCGCAAGCTTACATGGCAAGGAATTCCGAGGAGCATTCGTGA CAGTCATCGGAAAGTTCGAGATAGTCAAGATGGTCTTATAATTCAGAGGAACCTTGGCCTTTATTTTTCTGGTGGGGATA GACAGGAGTTGAAGCTGAGAATCACAGGTCGTATATGGAAAGAAGAATGA
Protein sequence (LotjaGi1g1v0278800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPGGGVFKEVLESHLLSSDYETGKAKSEAKSSSTFPKSSVGSTGKNEISSKNGVYDLLKCPVCKNLMYPPIHQCPNGHT LCSNCKIEVHNICPTCDHDLENIRCLALEKVAESLELPCKYQSLGCHDIFPYYTKLKHEQSCGFRPYNCPYAGSECSVMG DLPTLLAHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTIFNSFGRHFCLHFEAFQIGTAPVYMAFLRFLGEDSEA KKFSYSLEVGANGRKLTWQGIPRSIRDSHRKVRDSQDGLIIQRNLGLYFSGGDRQELKLRITGRIWKEE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 307 | 307 | 1.7E-189 | – | |
| PANTHER | 1 | 307 | 307 | 1.7E-189 | – | |
| Gene3D | 12 | 114 | 103 | 4.9E-7 | ||
| MobiDBLite | 28 | 47 | 20 | - | – | |
| SUPERFAMILY | 51 | 102 | 52 | 4.24E-6 | – | |
| CDD | 59 | 96 | 38 | 5.82707E-12 | – | |
| ProSiteProfiles | 61 | 97 | 37 | 8.683 | ||
| Pfam | 103 | 302 | 200 | 1.4E-77 | ||
| ProSiteProfiles | 114 | 174 | 61 | 14.314 | ||
| SUPERFAMILY | 114 | 306 | 193 | 9.81E-48 | ||
| Gene3D | 115 | 169 | 55 | 4.0E-18 | ||
| Gene3D | 176 | 303 | 128 | 1.7E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Ubiquitin-dependent protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein. | ||
| Biological process | Multicellular organism development | The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult). | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. | ||
| Cellular component | Host cell nucleus | A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction. |
Expression pattern of LotjaGi1g1v0278800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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