Domain Predictions — View

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PTHR12802:SF41

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v0862930.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SWI/SNF complex subunit SMARCC2 [Medicago truncatula] gi\|357463551\|ref\|XP_003602057.1\|	Domains Coil IPR032451 NON_CYTOPLASMIC_DOMAIN PF16495 PTHR12802 PTHR12802:SF41 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE mobidb-lite	14
Lj1g3v0862930.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: SWI/SNF complex subunit SWI3C-like [Glycine max] gi\|356518555\|ref\|XP_003527944.1\|	Domains G3DSA:1.10.10.60 IPR001005 IPR009057 IPR017884 PF00249 PS51293 PTHR12802 PTHR12802:SF41 SM00717 SSF46689 cd00167 mobidb-lite	12
LotjaGi1g1v0336400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SWI/SNF complex subunit SWI3A; TAIR: AT2G47620.1 SWITCH/sucrose nonfermenting 3A; Swiss-Prot: sp\|Q8W475\|SWI3A_ARATH SWI/SNF complex subunit SWI3A; TrEMBL-Plants: tr\|G7J3D7\|G7J3D7_MEDTR SWI/SNF complex protein; Found in the gene: LotjaGi1g1v0336400	Domains Coil G3DSA:1.10.10.10 G3DSA:1.10.10.60 IPR001005 IPR007526 IPR009057 IPR017884 IPR032451 IPR036388 PF00249 PF04433 PF16495 PS50934 PS51293 PTHR12802 PTHR12802:SF41 SM00717 SSF46689 cd00167 mobidb-lite	20
LotjaGi6g1v0252700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SWI/SNF complex subunit SWI3A; TAIR: AT2G47620.1 SWITCH/sucrose nonfermenting 3A; Swiss-Prot: sp\|Q8W475\|SWI3A_ARATH SWI/SNF complex subunit SWI3A; TrEMBL-Plants: tr\|G7J3D7\|G7J3D7_MEDTR SWI/SNF complex protein; Found in the gene: LotjaGi6g1v0252700_LC	Domains G3DSA:1.10.10.10 IPR007526 IPR009057 IPR036388 PF04433 PS50934 PTHR12802 PTHR12802:SF41 SSF46689	9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SSF46689	SUPERFAMILY	1	25.00