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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Pseudouridine synthesis | The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Biological process | RNA modification | The covalent alteration of one or more nucleotides within an RNA molecule to produce an RNA molecule with a sequence that differs from that coded genetically. | ||
| Molecular function | Pseudouridine synthase activity | Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X2 [Cicer arietinum] gi|502113547|ref|XP_004494685.1| | 8 | ||
| – | TRNA pseudouridine synthase d, putative; TAIR: AT3G04820.1 Pseudouridine synthase family protein; Swiss-Prot: sp|O74343|YH2X_SCHPO Putative pseudouridine synthase C1A4.09; TrEMBL-Plants: tr|A0A0B2RGJ2|A0A0B2RGJ2_GLYSO Multisubstrate pseudouridine synthase 7; Found in the gene: LotjaGi1g1v0779800 | 18 | ||
| – | TRNA pseudouridine synthase d, putative; TAIR: AT3G04820.1 Pseudouridine synthase family protein; Swiss-Prot: sp|Q08647|PUS7_YEAST Multisubstrate pseudouridine synthase 7; TrEMBL-Plants: tr|I1NC79|I1NC79_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0779800 | 18 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 33.33 |