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No description is available for this domain.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Structural constituent of ribosome | The action of a molecule that contributes to the structural integrity of the ribosome. | ||
| Cellular component | Ribosome | An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins. | ||
| Biological process | Translation | The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | 40S ribosomal protein S2 [Medicago truncatula] gi|357521321|ref|XP_003630949.1| | 18 | ||
| – | 40S ribosomal protein S2 [Medicago truncatula] gi|357521321|ref|XP_003630949.1| | 20 | ||
| – | 30S ribosomal protein S5 [Medicago truncatula] gi|357519961|ref|XP_003630269.1| | 16 | ||
| – | PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine max] gi|356521382|ref|XP_003529335.1| | 16 | ||
| – | PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine max] gi|356521382|ref|XP_003529335.1| | 25 | ||
| – | 40S ribosomal protein S2 [Medicago truncatula] gi|357521321|ref|XP_003630949.1| | 20 | ||
| – | 30S ribosomal protein S5 [Medicago truncatula] gi|357519961|ref|XP_003630269.1| | 16 | ||
| – | 30S ribosomal protein S5; TAIR: AT1G58380.1 Ribosomal protein S5 family protein; Swiss-Prot: sp|Q8L8Y0|RS21_ARATH 40S ribosomal protein S2-1; TrEMBL-Plants: tr|I1K5K3|I1K5K3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0681100_LC | 17 | ||
| – | 30S ribosomal protein S5; TAIR: AT1G58380.1 Ribosomal protein S5 family protein; Swiss-Prot: sp|Q8L8Y0|RS21_ARATH 40S ribosomal protein S2-1; TrEMBL-Plants: tr|I1K5K3|I1K5K3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0681100_LC | 17 | ||
| – | 30S ribosomal protein S5; TAIR: AT1G58380.1 Ribosomal protein S5 family protein; Swiss-Prot: sp|Q8L8Y0|RS21_ARATH 40S ribosomal protein S2-1; TrEMBL-Plants: tr|I1K5K3|I1K5K3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0681100_LC | 17 | ||
| – | 30S ribosomal protein S5; TAIR: AT3G57490.1 Ribosomal protein S5 family protein; Swiss-Prot: sp|Q9SCM3|RS24_ARATH 40S ribosomal protein S2-4; TrEMBL-Plants: tr|V7CT27|V7CT27_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0072200 | 19 | ||
| – | 30S ribosomal protein S5; TAIR: AT1G64880.1 Ribosomal protein S5 family protein; Swiss-Prot: sp|B4RT45|RS5_ALTMD 30S ribosomal protein S5; TrEMBL-Plants: tr|G7LE23|G7LE23_MEDTR 30S ribosomal protein S5; Found in the gene: LotjaGi3g1v0014800 | 14 | ||
| – | 30S ribosomal protein S5; TAIR: AT2G33800.1 Ribosomal protein S5 family protein; Swiss-Prot: sp|Q9ST69|RR5_SPIOL 30S ribosomal protein S5, chloroplastic; TrEMBL-Plants: tr|I1KLL8|I1KLL8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0057800 | 25 | ||
| – | 30S ribosomal protein S5; TAIR: AT3G57490.1 Ribosomal protein S5 family protein; Swiss-Prot: sp|Q9SCM3|RS24_ARATH 40S ribosomal protein S2-4; TrEMBL-Plants: tr|V7CT27|V7CT27_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0457300 | 19 | ||
| – | 30S ribosomal protein S5; TAIR: AT2G41840.1 Ribosomal protein S5 family protein; Swiss-Prot: sp|P49688|RS23_ARATH 40S ribosomal protein S2-3; TrEMBL-Plants: tr|V7CT27|V7CT27_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0457300 | 11 | ||
| – | 30S ribosomal protein S5; TAIR: AT1G64880.1 Ribosomal protein S5 family protein; Swiss-Prot: sp|B4RT45|RS5_ALTMD 30S ribosomal protein S5; TrEMBL-Plants: tr|A0A1J7GE15|A0A1J7GE15_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0305300 | 14 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| SSF54768 | SUPERFAMILY | 1 | 6.25 |