Domain Predictions — View

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PTHR18934:SF192

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi4g1v0461100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase, putative; TAIR: AT1G48650.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp\|F4HYJ7\|DEXH3_ARATH DExH-box ATP-dependent RNA helicase DExH3; TrEMBL-Plants: tr\|I1KQG1\|I1KQG1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0461100	Domains G3DSA:1.20.120.1080 G3DSA:3.30.160.20 G3DSA:3.40.50.300 IPR001650 IPR007502 IPR011545 IPR011709 IPR014001 IPR014720 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00035 PF00270 PF00271 PF04408 PF07717 PS51192 PS51194 PTHR18934 PTHR18934:SF192 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00358 SM00487 SM00490 SM00847 SSF52540 SSF54768 cd00048 cd17917 cd18791 mobidb-lite	34
LotjaGi5g1v0106200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase; TAIR: AT2G35920.1 RNA helicase family protein; Swiss-Prot: sp\|F4ILR7\|DEXH1_ARATH DExH-box ATP-dependent RNA helicase DExH1; TrEMBL-Plants: tr\|I1L9L1\|I1L9L1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0106200	Domains Coil G3DSA:1.20.120.1080 G3DSA:3.40.50.300 IPR001650 IPR002464 IPR007502 IPR011545 IPR011709 IPR014001 IPR027417 PF00270 PF00271 PF04408 PF07717 PS00690 PS51192 PS51194 PTHR18934 PTHR18934:SF192 SM00487 SM00490 SM00847 SSF52540 cd17917 cd18791 mobidb-lite	26
LotjaGi5g1v0106200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase; TAIR: AT2G35920.1 RNA helicase family protein; Swiss-Prot: sp\|F4ILR7\|DEXH1_ARATH DExH-box ATP-dependent RNA helicase DExH1; TrEMBL-Plants: tr\|K7K9K1\|K7K9K1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0106200	Domains Coil G3DSA:1.20.120.1080 G3DSA:3.40.50.300 IPR001650 IPR002464 IPR007502 IPR011545 IPR011709 IPR014001 IPR027417 PF00270 PF00271 PF04408 PF07717 PS00690 PS51192 PS51194 PTHR18934 PTHR18934:SF192 SM00487 SM00490 SM00847 SSF52540 cd17917 cd18791 mobidb-lite	26
LotjaGi5g1v0106200.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase; TAIR: AT2G35920.2 RNA helicase family protein; Swiss-Prot: sp\|F4ILR7\|DEXH1_ARATH DExH-box ATP-dependent RNA helicase DExH1; TrEMBL-Plants: tr\|A0A0B2SVY7\|A0A0B2SVY7_GLYSO Putative ATP-dependent RNA helicase DHX36; Found in the gene: LotjaGi5g1v0106200	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:1.20.120.1080 G3DSA:3.40.50.300 IPR001650 IPR002464 IPR007502 IPR011545 IPR011709 IPR014001 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00270 PF00271 PF04408 PF07717 PS00690 PS51192 PS51194 PTHR18934 PTHR18934:SF192 SM00487 SM00490 SM00847 SSF52540 TRANSMEMBRANE cd17917 cd18791 mobidb-lite	29
LotjaGi5g1v0106200.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase; TAIR: AT2G35920.1 RNA helicase family protein; Swiss-Prot: sp\|F4ILR7\|DEXH1_ARATH DExH-box ATP-dependent RNA helicase DExH1; TrEMBL-Plants: tr\|I1L9L1\|I1L9L1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0106200	Domains Coil G3DSA:1.20.120.1080 G3DSA:3.40.50.300 IPR001650 IPR002464 IPR007502 IPR011545 IPR011709 IPR014001 IPR027417 PF00270 PF00271 PF04408 PF07717 PS00690 PS51192 PS51194 PTHR18934 PTHR18934:SF192 SM00487 SM00490 SM00847 SSF52540 cd17917 cd18791 mobidb-lite	26
LotjaGi5g1v0106200.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase; TAIR: AT2G35920.1 RNA helicase family protein; Swiss-Prot: sp\|F4ILR7\|DEXH1_ARATH DExH-box ATP-dependent RNA helicase DExH1; TrEMBL-Plants: tr\|I1L9L1\|I1L9L1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0106200	Domains Coil G3DSA:1.20.120.1080 G3DSA:3.40.50.300 IPR001650 IPR002464 IPR007502 IPR011545 IPR011709 IPR014001 IPR027417 PF00270 PF00271 PF04408 PF07717 PS00690 PS51192 PS51194 PTHR18934 PTHR18934:SF192 SM00487 SM00490 SM00847 SSF52540 cd17917 cd18791 mobidb-lite	26
LotjaGi5g1v0106200.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase; TAIR: AT2G35920.2 RNA helicase family protein; Swiss-Prot: sp\|F4ILR7\|DEXH1_ARATH DExH-box ATP-dependent RNA helicase DExH1; TrEMBL-Plants: tr\|K7K9K1\|K7K9K1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0106200	Domains Coil G3DSA:1.20.120.1080 G3DSA:3.40.50.300 IPR001650 IPR002464 IPR007502 IPR011545 IPR011709 IPR014001 IPR027417 PF00270 PF00271 PF04408 PF07717 PS00690 PS51192 PS51194 PTHR18934 PTHR18934:SF192 SM00487 SM00490 SM00847 SSF52540 cd17917 cd18791 mobidb-lite	26

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	14.29