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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0106200 |
| Transcript ID | LotjaGi5g1v0106200.3 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent RNA helicase; TAIR: AT2G35920.2 RNA helicase family protein; Swiss-Prot: sp|F4ILR7|DEXH1_ARATH DExH-box ATP-dependent RNA helicase DExH1; TrEMBL-Plants: tr|A0A0B2SVY7|A0A0B2SVY7_GLYSO Putative ATP-dependent RNA helicase DHX36; Found in the gene: LotjaGi5g1v0106200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:20070353..20079201) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCTCCCTGGCATTTCCGCCCTACTCTCCACTGCCATTACTTCACCTCCATACACCCGCCCGTACCCAAACTTTTCCC CGCTAACCTCCGCATCACAACCGCCACCCTCATGTCCTTCCGCCCCAACTACCAAGGCGGCGGCCGCAGAGGCGGTGCCT CATCCTCCGGTCGCGGCGGAGGCCGCCGTGGAGGCAGCGGCGGCCGTGGTGGCGGACGCGGCGAGCAACGATGGTGGGAC CCTGTTTGGCGAGCTGAGCGCCTGAGGCAACAACAGCCCGAGGTAAATAAATTCAATTTGATTGGAAAAATGGTTATTGG CTTAGAATTTTTGAAGTTGTAACAATTAGATGATTTTAATTTTTTTTTAATTTAATTTTTTTTGTGAGATGTAGAAGGAG GTGTTTAATGAGAATGAATGGTGGGATAAGATAGAGAAGATGCAAAGAGGAGGGGAACAGGAGCTGATTATCAAGCGTTA CTTCAGCATTGGTGACCAGCAAACCCTAGCTGATATGGCTTATAAGCAGGGTCTTTACTTGTATGTTCATTGAATACTTT GAATTTCTTCATCATTTTACCCAGAAAGTGAATTGGGACTATACTTTCAATTTTATACTTTCAAGTTGATGTCATAATAG TATACATGCACCTGCTTGAAAAAAAATATTCAGAATTTTGCTGTTGGTTATGACTTATGATGCTGATTTCTATTTATTTA TAAAATAAAATGAATAAATAAAAATCTTTATTTTAGATGAGCTGAATCTGTTTGTCCTTATTAATAACTTAATCTGATAT CACTAGAAATAAATGATAACTAGTTTATTTCTCCCATTTTTCATTTTTTTCATGCTAATGTTTGATTCCTCATCCCAAAT TGTTTAATTCTAGTTTGATGCGATGTTTCGTTTAATGCTGTTGTGTGAGTTAGGGGTGATTACAGTCCAATCTAGGTCTT TCTGAGGATCAACCTCAAACTGAACTTCACGTTCTGTGAATTTCACAAGCCAAGCCATGAGCTCTTATGAATTGCACTTG GCTAATGTGCCCAAAAATGTAGATAACTGAACATAAGTTATATAACATTAACTATATTAACAATAGTGTAAATTAGATAA CAATCTCAATTTCAAAACAATTAGGTTCTGTACCAAACACATCAGGTAATTGACCACACGAATCATGATTTTCACTGTAA CTTCGATATACATGTATGTGTGTATTCAGTTATAACAAATTAGCAACAGATAAGGTCCTGTTTTAGAATTGTATTGGTTA GAAAGTGGGCCAATGAAATAATTTGGCATGGACTGAGAGACTGCGGAAGGTGATGGTAGGCTAAAATACATTTAAAAGTG GTGTGTTTGGGATTTGACACCCTGACCAAGCTTTAACAAAATGCTTTAGTGCTATTGGCTCTGGGAAAATATGTTATAAA TAATTGTCACAAATTAGCATCCCAAAATGTCGCTTGGACAGTTGGACTGTGAAAATTGTTCATGGTAATGTGCACATGCA CTAGACCAAACTGTACAGCAAACAAAGTTTGGTTTGGATTTGTTTAAGTACTTGGTGTGGATCAGATATTTTGACTCACT TATGTGTGCATATTCTTATGCCAGCAGTATTACGTTGGCATCTAGAAGTCCCAGGCAGTTATGCTGTGCAAAACTTTCTG AGTTCTTGGCAGTAAATCAATTTGTGAAATAATCATTTCTTGCATAACATGCAATACATACTTAGCATTTATTGATTCTA CATGTGAACATGTAAAGCTCAATCTTGTATATTGTCCAACATCTTTAGTTCTTAATTATCTGATTTTTACTTGCGCAAAG AAAGCCATGCTTATAATAAGGGGAAGACTCTCGTTGTTAGCAAAGTTCCACTGCCTGATTACCGTGCAGATCTTGATGAG CGCCATGGAACAACACAGAAGGAGGTGGAGCAGACCTAGCTTATTTCATTCTCTGTTCACCAATTTTTATTTCAAAATTT CAAATATACTAACAATGTTTGGTCTTCCACAGATTAGAATGTCCACAGACATTGAGAGGAGAGTAGGGAATCTTTTGAAC AGCTCACAGTCAATGGAGACAGAAACTGCTAGTTTGCCTTCTGTATCAACTGACCTTGGACATAAACAATCAATGAGTAC TACAAAGTCTGTTTCTTCACAGCAGACTGATTCTTCAAAGGAGAAACTTAGTGTTAAACTCAAGGAAAAGCAGAAACTTA TGCAGGTAGCTAAGCATCTAGTAGGAATATGACTGTAAATCTGTTATCTTCTGTTCAAATTGATTGTGGCAGTTACTTGA CTGCATTATGTTGCATTTTAAATTTATGTCAGAATTGGAAATATGCAGGCAAGTGATGCTTTGAAGGAAATGAAATCATT TAGGGAGAAGCTTCCTGCATTCAAAATGAAGTCTGAGTTTCTGAAAGCTGTTAGCAAAAATCAGGTGGGGAGAGCTATTT ATCATGACAAAAATGTCGTATTTATCATCGGTTATTGGCTTGATGCTGATAGGTTTGTAAGAAATATTATCTATAGATCT TCAAGAAATAAATAAATGGACAAACTTTGTTGCTTGACCTGTCAGTGGAAATGTGGAATAAATTGCCACTATAATGCATG GTCTGTTTTGACTTCTTTTAATATTTTCACTTATAATTGTTTCCTGAATTATCATCAATTGATGTCATTCCAAGATTCTA TTGTAATTTGGCTGATGTTAGCGCAGGTATTGGTAGTTTCAGGAGAGACAGGATGTGGCAAAACAACACAGCTGCCTCAA TTCATTCTGGAAGAAGAAGTATCATGTTTGCGTGGAGCTGATTGCAACATAATTTGTACTCAGCCTCGTCGTGTATCTGC GATTTCTGTTGCAGCTCGAATATCTGCTGAACGGGGCGAGATCCTCGGTGAAACAGTCGGATACCACATCCGTCTTGAAA CAAAACGTTCTGCAGAAACACGCCTTCTCTTCTGCACCACTGGTGTCTTACTTCGACAGTTGGTAATTTTACCCAAACTG AGTCTCAGTGATTTTAAGATTTCATTTTCTGTCTAAACCTGCTCAAGTGTTTCTTCAATTGTCAATAACTGGTCTTTGTC TTAGATTCTAATGTTCTCCATGCTATTTGTACTGAGTTTTTTTTTTCTTGCGGCGGGGAGTGTGTGAGTGTGTGGGGGTG AGGGTGCGTTGTTACTTCATGTTAAGTAAAAAACCATTCATGAGCCCTCATCTCACAACTTAAGCTTTAGGGAGAGTTGG TAATTAGCATGATATTGGAGCCTCTATAACCATTTGTCAGGAATGAATTCCTTGCCGTCCTGTCCCCAATATTCTAAATA AAGGTTGAATTTCAGTATAAGGTCAGGTAGCATGTGCATTATCCACACTTTAAGGCCACAAAGATCTTGTATGAGGGATT GTGTTAGGAACAACATCAATCATGAGCCTTCACCTAGTAGCTTAAGCTTTTTCGATAGTTGGTCATTAACACTTCTTGCC CTGCAGATTGTGGTCGTGATGCTTGTAACAAGACTAGTCTAAATATCTATCTTAAATTTTGTAGAGGATAAATATAAAGC TAAAATCTTGCAGCCTTATCTGGGATATACATATGTTATTCCCAGCAGTCTGTGGGGTTGACATATTTTCTGTCTTCATT TTTGAATAGGTCCAAGATCCGGAGTTGACCGGCGTTAGTCATTTGCTGGTTGATGAAATTCATGAAAGAGGCATGAATGA AGACTTTTTAATTATAATTTTACGTGATCTTCTTCCTCGACGCCCTGATTTACGCCTCATTGTAATGAGTGCTACTATCA ACGCTGATTTGTTCTCGAATTACTTTGGAAATGCCCCAACTATACACATACCGGTATTGCATTTATTTTTAGATTTTATG TTATTGAGTTATAATTTTGGATTTCAATGCAAATAGCATTGTTTTTTATTTTATTTGGACATATGTGCCAGGGATTTACT TTTCCTGTAGCGGAGCACTACCTAGAAGATGTGTTGGAGAAAACTCGATACACCATCAAGCCAGAGTTTGACAATTTTGA GGGAAATTCAAGGAGAAAAAGGAAACAACAGGATTCTAAGAAGGATCCTTTGACTGAAATGTTTGAGGCATGTATATTTG ACCTATCAGTCCATGTATTTACAGTCTTCGACTCTTCATGATATAACTAAGATGTTTTGAACTAATAATCCATAAATTTA GGTCTAGAAGATTCATGAATCTGCTGATTTTGTTTCTTGGTCAATTAGAATCTTGTATTCGTGTCTTAGCGATGTCTTAT TGATGTCAATTCATGATACTGTGGTAGTTGCAGAGTCAATTTAGTGTTGGGATCAAAAGATTTGCACCTTAGTGATGTGC TTTCTTAATTTCTTTTCTTGCAATTAGGGATATGCTTTCTTAATTTCCTTATATCTTGTTGCTTGAGAGTTTTTTTTCCT CCTACTACTTTTACTAATGGGCTCACCTGTGGCCATTGCCATTGATAGGCCCCTGGTCCCAATTTAAATGGAAGGGGAAA AGTCAGTTAGATGAGAGAGAATAGATCCCAGATTTCATTATATAAGGATGTTTCGGGGGAGAATGGGATATGCATTTTCT TCCACCAGCTTGGAGACATAGGAGTTTTCCTTGGCTGGGAGCATTTTCTCTCTTTCTTCTGTATTTCCATATTGTTCCTT GTTAATAATACAATCTTCCTAATGTTAGATAGGAATTATTCCTTTCAGTCATGGTAATATATAAAATTATAAATGTAGGT ATGGTTCTTAGTTCTTACCCATCTCCTTGTTCTTACAGGATGTTGATGTAGATACTCATTATAAGAACTACAGCTTGGGT GTTAGAAAATCTCTTGAAGCTTGGTCAGGTTCACAGATTGATTTGGGTCTGGTATGTATGTGCACAGTATTTTTTGTTTT TTTGTAGATGAATCTGTATTGAATGAATTAGATGCATCAGCTGTTGAGCAGACTCTTTTAGCTTAGTGTGAAATTATCTG GTAAAAAAGCATTGGAAGTTTGATTATTTTTACTGGAGCTAGTTTAGAAGCCTCTGTTGAATTAGATGTATCAGTTGTTG AGCAGTCTCTTTTAGCTTAGTATGTAATTATCTGGTCAAGAAGCATCAAAAGTTTTGTTAGAATATAATATAAAACCATT CATGTGGCCCTTACATAACAGCTTAAGTTGTTGGGTAAAGGCCACATGAATGGTTTTATATTATATTCTAACAATTTTTT ATTTCAACCAGAGTATCCAACATTAACAGCATTGAGTAAATTCCTCACCCCAGTTGGTGGCATTTCACCACGATAATTCT CTAAACTTGTAGTACTTGGAATTGCATGATCACTATTCACTTCTTATATTTTCGATCGCATTGAAATATGGTGAGCGTTG ATCGTATCGAAATCCAGTTGAGGTCGTCCAAGGATTAGAACTCCTGAGATTCAAGGAGTTATCCATAATCCTTTAACGAT CTCATCTGGATTTCGATACAATCAACGTTCACCATATTTCAATGCGATTGGAAATATAATAAGTGATCATGCAATTCTAA GTTAGAGAATTATCGTGATGAAACGCACTTTCCTCAAATGTTACCACCAATGTAGCAAGTCAAGCTCCAATAATAATAAT CAGAAGTAATCCCCATTCTATGCCAGAACAAACTTGTGAAGTGCCACCATCTGGGGCGAAGAATTTACTCAATGCTGTTA ATGTTGGATACTCTGGTTTCAACCAAAAAGAAGAAACTTCTGATATTAATTTGTCACTTAGGCTTGGTTTCAGATCATGA GGTTTTTTTCCCTTTTACACAAAAAAAATCTTGAGGCTTTATTACATTTTCAAACTATTATTGTTTTACTTCCATTCCAT TATAGGTTAGGTTTTGTTAAATTTTGTTATTGGGACTTGGGTTGATTCACCTGGGGAAATGATAATGACAAATTTAACAA CTGGAGGCAAAGCCGTACTATACTTTCAACCTGGTGGATGTGTTAGAAATATATACTATAAAACCATTCATGTGGTTGTT TCAACCCTGAAGTATACTAATTACAGTCATACGACAGTGAACAAATATTCTAATCTGTGTTAAATATGGTAATGAATCTA GATTAGTATTCTAATAGTTTGCTTCTTGACTTTCCTCTTTGTCGATGAATTTTGCATCCTATATTCTCTGTTGCAACTAT TTTTCTGTTCGTACTAATTACTATCTTCCTTACTGATGTGGTCTATTCTTATATTGAAATTTCTTCAGTATGTTGAATCA GCTTGAAGAGTGCCTGTTTCATTTCGATTACTATGATGTTTCAGGTAGAGGCTTCAATTGAGTATATATGTCGAAATGAA GGTAGTGGAGCAATTCTTGTATTTCTTACCGGCTGGGATGAAATCTCTAAGCTACTTGACAAACTTAAGGGAAACAGATT GCTTGGAGATCCTAGCAAGTTCTTAATCCTTCCAATACATGGCTCAATGCCTACTGTCAACCAATGTGAAATATTTGATC GTCCTCCCCCTAACAAGAGGCAAGCAATAGCATGTTTCTTTTGCTAATATCAACATGACAGATTTTTGTTTCCAAAATTT GCTTGGAGAATTTTGTGAGGAACTTGTGTGAGCATTTCTTTAGCAAGTTGTATGTATAAATGGGCAAATGCAGAGGCAAA ATGAAGACCATTGTGGCATCTAGGTTTTGATTCTTGCTATTTTGCAAATGCAGAAAAATTGTGCTAGCAACAAATATTGC TGAGAGTAGCATCACAATAGATGATGTTGTGTATGTCGTAGACTGTGGTAAAGCAAAGGAGACCAGCTATGATGCTCTAA ATAAGCTTGCCTGCTTGTTACCATCATGGATTTCAAAGGCTTCAGCTCGTCAGGTATTGATATTTTAAAACATTTTGTTA CAGCATACAAGGTCTATTGCTCTCATTGAACAAGCAACTCATCGCAGGTTAAGCTTGCTGTTATTGCTGAATGTCGTTGT TCTAATTGTTGTGATTGACTCTACTGCTTTCTGCTTTGTCACCCCAAAAGAAATGGATAAGATAAAAGACAGAAACAGAG TATGAACAGGCAAATTTTACTTTTACTAATTGGTATACTATTTCAGAGACGCGGTCGTGCTGGTCGAGTGCAACCCGGAG TGTGTTATAGGTTGTATCCTAAACTGATCCACGATGCTATGCCAGAGTATCAGTTAGCTGAAATCCTCCGAACACCGTTG CAAGAGTTGTGCCTGCATATTAAAAGCTTGCAGCTTGGAACTGTGGCATCATTCTTAGAAAAGGCACTTCAGCCACCAGA TTCTCTTGCGGTTCAGAATGCTATTGAACTTCTCAAAACAATTGGCGCATTAGATGAGAAAGAGGACCTTACTCCACTGG GTATATATTTGCTGGATATGCTTGTCTCCTTAAGTTATTTAACCTAAGCTTTGGTTATTTTTTTAGCTAACTTGGTCTTT TACAGGTCAGCATCTTTGTACTATACCTTTGGACCCAAATATTGGAAAGATGCTTCTCATGGGCTCTATCTTTCAATGCC TCAATCCTGCCTTAACTATTGCTGCTGCTCTTGCTTATCGTAACCCATTTGTCTTACCCATAAACAGAAAAGAGGAAGCT GATGCAGCAAAAAGATCTTTTGCCGGTGATTCTTGCAGGTTAGTTATTGATATTTGATAGTGTGAGAAAAAACTCTCTTC TGATAGTTTTCATTCAAGCTTTTCTGCGTTAACCATGCTTGTACTTCATTAGTTATGTATTTTTTATTCAGCGATCATAT TGCGCTTCTTAAAGCTTTTGAAGGATGGAAGGAGGCAAAACGTAGTGGGAATGAAAAAGATTTTTGTTGGGAGAATTTCC TATCCCCAGCGACCTTGCGGTTGATTGATGATATGAGGATGCAATTCCTCAATTTATTATCTGACATTGGATTTGTTGAC AAGTCCAGGGGTGCTAATGTAAGCCCAAGTCTCTTTTGCTTTTTTATTTCTAATTGAAGTACTTTTTCCCATCTTTATCT CAATTTAGTTTCACACTCTTGAATGCAAATTAGTGAAAAAGATTCCTATGGACTAATTTTATTAGTCTGGGAACTTCTCA CTTTTTCTGTTTAGTTCTGAAAGTTTTGGCTAATTCTGAACAAGGCCTAGGATTGTGGTTTATCAAACATAATGCATGTC TCTGCAGGCTTACAACCAGTATAGTCATGATCTGGAGATGGTCTGTGCAATTCTTTGTGCTGGTCTGTACCCTAATGTTG TACAGTGCAAAAGAAGAGGAAAACGGACAGCACTCTACACTAAAGAAGTCGGGAAGGTCGACATCCACCCCTCTTCTGTT AACGCAGGGGTTCACATCTTTCCTCTGCCCTACTTGGTATATAGTGAAAAAGTGAAAACTACCAGCATCTATATTAGAGA CTCCACTAACATTTCAGATTATGCCCTACTTCTATTTGGTGGTAATCTTGTCCCTTCCAAAAGTGGTGATGGCATAGAGA TGCTTGGAGGTTACCTTCATTTCTCTGCTTCGAAGAGTGTCATTGAGTTGATAAAGGCAAATTTCATTTCCCTCAATCTT TTCACACCAAATTAAATGTCTTCGTAACTTGCTTTGAGACATGCTTGAACTAAACAATCTCATGATAACTGGTTATGCAG AAATTACGCGGGGAGCTTGACAAGCTTCTAAACAGAAAGATTGTAGAACCAGGGTTGGACGTTTCTGGTGAAGGAAAGGG AGTGGTTGCCGCTGCTGTTGAGTTGCTGCACAATCAAATGATTCGATGA
CDS sequence (LotjaGi5g1v0106200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTATAATAAGGGGAAGACTCTCGTTGTTAGCAAAGTTCCACTGCCTGATTACCGTGCAGATCTTGATGAGCGCCAT GGAACAACACAGAAGGAGGTGGAGCAGACCTAGCTTATTTCATTCTCTGTTCACCAATTTTTATTTCAAAATTTCAAATA TACTAACAATGTTTGGTCTTCCACAGATTAGAATGTCCACAGACATTGAGAGGAGAGTAGGGAATCTTTTGAACAGCTCA CAGTCAATGGAGACAGAAACTGCTAGTTTGCCTTCTGTATCAACTGACCTTGGACATAAACAATCAATGAGTACTACAAA GTCTGTTTCTTCACAGCAGACTGATTCTTCAAAGGAGAAACTTAGTGTTAAACTCAAGGAAAAGCAGAAACTTATGCAGG CAAGTGATGCTTTGAAGGAAATGAAATCATTTAGGGAGAAGCTTCCTGCATTCAAAATGAAGTCTGAGTTTCTGAAAGCT GTTAGCAAAACGCAGGTATTGGTAGTTTCAGGAGAGACAGGATGTGGCAAAACAACACAGCTGCCTCAATTCATTCTGGA AGAAGAAGTATCATGTTTGCGTGGAGCTGATTGCAACATAATTTGTACTCAGCCTCGTCGTGTATCTGCGATTTCTGTTG CAGCTCGAATATCTGCTGAACGGGGCGAGATCCTCGGTGAAACAGTCGGATACCACATCCGTCTTGAAACAAAACGTTCT GCAGAAACACGCCTTCTCTTCTGCACCACTGGTGTCTTACTTCGACAGTTGGTCCAAGATCCGGAGTTGACCGGCGTTAG TCATTTGCTGGTTGATGAAATTCATGAAAGAGGCATGAATGAAGACTTTTTAATTATAATTTTACGTGATCTTCTTCCTC GACGCCCTGATTTACGCCTCATTGTAATGAGTGCTACTATCAACGCTGATTTGTTCTCGAATTACTTTGGAAATGCCCCA ACTATACACATACCGGGATTTACTTTTCCTGTAGCGGAGCACTACCTAGAAGATGTGTTGGAGAAAACTCGATACACCAT CAAGCCAGAGTTTGACAATTTTGAGGGAAATTCAAGGAGAAAAAGGAAACAACAGGATTCTAAGAAGGATCCTTTGACTG AAATGTTTGAGGCATGTATATTTGACCTATCAGTCCATGATGTTGATGTAGATACTCATTATAAGAACTACAGCTTGGGT GTTAGAAAATCTCTTGAAGCTTGGTCAGGTTCACAGATTGATTTGGGTCTGGTAGAGGCTTCAATTGAGTATATATGTCG AAATGAAGGTAGTGGAGCAATTCTTGTATTTCTTACCGGCTGGGATGAAATCTCTAAGCTACTTGACAAACTTAAGGGAA ACAGATTGCTTGGAGATCCTAGCAAGTTCTTAATCCTTCCAATACATGGCTCAATGCCTACTGTCAACCAATGTGAAATA TTTGATCGTCCTCCCCCTAACAAGAGAAAAATTGTGCTAGCAACAAATATTGCTGAGAGTAGCATCACAATAGATGATGT TGTGTATGTCGTAGACTGTGGTAAAGCAAAGGAGACCAGCTATGATGCTCTAAATAAGCTTGCCTGCTTGTTACCATCAT GGATTTCAAAGGCTTCAGCTCGTCAGAGACGCGGTCGTGCTGGTCGAGTGCAACCCGGAGTGTGTTATAGGTTGTATCCT AAACTGATCCACGATGCTATGCCAGAGTATCAGTTAGCTGAAATCCTCCGAACACCGTTGCAAGAGTTGTGCCTGCATAT TAAAAGCTTGCAGCTTGGAACTGTGGCATCATTCTTAGAAAAGGCACTTCAGCCACCAGATTCTCTTGCGGTTCAGAATG CTATTGAACTTCTCAAAACAATTGGCGCATTAGATGAGAAAGAGGACCTTACTCCACTGGGTCAGCATCTTTGTACTATA CCTTTGGACCCAAATATTGGAAAGATGCTTCTCATGGGCTCTATCTTTCAATGCCTCAATCCTGCCTTAACTATTGCTGC TGCTCTTGCTTATCGTAACCCATTTGTCTTACCCATAAACAGAAAAGAGGAAGCTGATGCAGCAAAAAGATCTTTTGCCG GTGATTCTTGCAGCGATCATATTGCGCTTCTTAAAGCTTTTGAAGGATGGAAGGAGGCAAAACGTAGTGGGAATGAAAAA GATTTTTGTTGGGAGAATTTCCTATCCCCAGCGACCTTGCGGTTGATTGATGATATGAGGATGCAATTCCTCAATTTATT ATCTGACATTGGATTTGTTGACAAGTCCAGGGGTGCTAATGCTTACAACCAGTATAGTCATGATCTGGAGATGGTCTGTG CAATTCTTTGTGCTGGTCTGTACCCTAATGTTGTACAGTGCAAAAGAAGAGGAAAACGGACAGCACTCTACACTAAAGAA GTCGGGAAGGTCGACATCCACCCCTCTTCTGTTAACGCAGGGGTTCACATCTTTCCTCTGCCCTACTTGGTATATAGTGA AAAAGTGAAAACTACCAGCATCTATATTAGAGACTCCACTAACATTTCAGATTATGCCCTACTTCTATTTGGTGGTAATC TTGTCCCTTCCAAAAGTGGTGATGGCATAGAGATGCTTGGAGGTTACCTTCATTTCTCTGCTTCGAAGAGTGTCATTGAG TTGATAAAGAAATTACGCGGGGAGCTTGACAAGCTTCTAAACAGAAAGATTGTAGAACCAGGGTTGGACGTTTCTGGTGA AGGAAAGGGAGTGGTTGCCGCTGCTGTTGAGTTGCTGCACAATCAAATGATTCGATGA
Protein sequence (LotjaGi5g1v0106200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLIIRGRLSLLAKFHCLITVQILMSAMEQHRRRWSRPSLFHSLFTNFYFKISNILTMFGLPQIRMSTDIERRVGNLLNSS QSMETETASLPSVSTDLGHKQSMSTTKSVSSQQTDSSKEKLSVKLKEKQKLMQASDALKEMKSFREKLPAFKMKSEFLKA VSKTQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADCNIICTQPRRVSAISVAARISAERGEILGETVGYHIRLETKRS AETRLLFCTTGVLLRQLVQDPELTGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLIVMSATINADLFSNYFGNAP TIHIPGFTFPVAEHYLEDVLEKTRYTIKPEFDNFEGNSRRKRKQQDSKKDPLTEMFEACIFDLSVHDVDVDTHYKNYSLG VRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEISKLLDKLKGNRLLGDPSKFLILPIHGSMPTVNQCEI FDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASARQRRGRAGRVQPGVCYRLYP KLIHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLKTIGALDEKEDLTPLGQHLCTI PLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNPFVLPINRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEK DFCWENFLSPATLRLIDDMRMQFLNLLSDIGFVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALYTKE VGKVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIRDSTNISDYALLLFGGNLVPSKSGDGIEMLGGYLHFSASKSVIE LIKKLRGELDKLLNRKIVEPGLDVSGEGKGVVAAAVELLHNQMIR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 6 | 27 | 22 | - | – | |
| Phobius | 28 | 38 | 11 | - | – | |
| Phobius | 39 | 60 | 22 | - | – | |
| Phobius | 61 | 925 | 865 | - | – | |
| PANTHER | 78 | 918 | 841 | 0.0 | – | |
| PANTHER | 78 | 918 | 841 | 0.0 | – | |
| MobiDBLite | 80 | 122 | 43 | - | – | |
| MobiDBLite | 80 | 118 | 39 | - | – | |
| Gene3D | 95 | 326 | 232 | 8.8E-86 | – | |
| SMART | 146 | 339 | 194 | 1.2E-26 | ||
| SUPERFAMILY | 149 | 717 | 569 | 1.06E-79 | ||
| Pfam | 155 | 310 | 156 | 1.1E-6 | ||
| ProSiteProfiles | 158 | 325 | 168 | 18.4 | ||
| CDD | 165 | 324 | 160 | 3.44772E-92 | – | |
| ProSitePatterns | 267 | 276 | 10 | - | ||
| Gene3D | 411 | 570 | 160 | 1.0E-53 | – | |
| CDD | 412 | 559 | 148 | 4.33976E-62 | – | |
| ProSiteProfiles | 417 | 591 | 175 | 16.509 | ||
| Pfam | 422 | 550 | 129 | 8.0E-17 | ||
| SMART | 442 | 551 | 110 | 5.6E-20 | ||
| Gene3D | 593 | 694 | 102 | 8.7E-21 | – | |
| SMART | 613 | 704 | 92 | 5.7E-33 | ||
| Pfam | 614 | 701 | 88 | 1.1E-21 | ||
| Pfam | 773 | 854 | 82 | 4.9E-18 | ||
| Coils | 875 | 895 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Helicase activity | Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi5g1v0106200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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