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cd17917

Source: CDD

Description

DEXHc_RHA-like

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 25

Transcript Name Description Predicted domains Domain count
LotjaGi1g1v0046400.1
– ATP-dependent RNA helicase, putative; TAIR: AT2G30800.1 helicase in vascular tissue and tapetum; Swiss-Prot: sp|F4INY4|HVT1_ARATH DExH-box ATP-dependent RNA helicase DExH6; TrEMBL-Plants: tr|K7KB99|K7KB99_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0046400
Domains
36
LotjaGi2g1v0196000.1
– ATP-dependent RNA helicase; TAIR: AT1G58060.1 RNA helicase family protein; Swiss-Prot: sp|F4I9Q5|DEXH7_ARATH DExH-box ATP-dependent RNA helicase DExH7, chloroplastic; TrEMBL-Plants: tr|A0A0R0F600|A0A0R0F600_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0196000
Domains
28
LotjaGi2g1v0273300.1
– ATP-dependent RNA helicase, putative; TAIR: AT2G01130.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|F4IM84|DEXH5_ARATH DExH-box ATP-dependent RNA helicase DExH5, mitochondrial; TrEMBL-Plants: tr|K7LD94|K7LD94_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0273300
Domains
30
LotjaGi2g1v0273300.2
– ATP-dependent RNA helicase, putative; TAIR: AT2G01130.2 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|F4IM84|DEXH5_ARATH DExH-box ATP-dependent RNA helicase DExH5, mitochondrial; TrEMBL-Plants: tr|K7LD94|K7LD94_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0273300
Domains
26
LotjaGi3g1v0302600.2
– ATP-dependent RNA helicase, putative; TAIR: AT5G04895.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|F4HYJ7|DEXH3_ARATH DExH-box ATP-dependent RNA helicase DExH3; TrEMBL-Plants: tr|I1KVZ2|I1KVZ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0302600
Domains
35
LotjaGi3g1v0302600.3
– ATP-dependent RNA helicase, putative; TAIR: AT5G04895.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|F4HYJ7|DEXH3_ARATH DExH-box ATP-dependent RNA helicase DExH3; TrEMBL-Plants: tr|I1KVZ2|I1KVZ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0302600
Domains
16
LotjaGi3g1v0302600.4
– ATP-dependent RNA helicase, putative; TAIR: AT5G04895.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|F4HYJ7|DEXH3_ARATH DExH-box ATP-dependent RNA helicase DExH3; TrEMBL-Plants: tr|I1KVZ2|I1KVZ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0302600
Domains
30
LotjaGi4g1v0363900.1
– ATP-dependent RNA helicase, putative; TAIR: AT1G27900.1 RNA helicase family protein; Swiss-Prot: sp|Q93Y16|DEAH4_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4; TrEMBL-Plants: tr|K7KQA5|K7KQA5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0363900
Domains
23
LotjaGi4g1v0363900.2
– ATP-dependent RNA helicase, putative; TAIR: AT1G27900.1 RNA helicase family protein; Swiss-Prot: sp|Q93Y16|DEAH4_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4; TrEMBL-Plants: tr|K7KQA5|K7KQA5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0363900
Domains
23
LotjaGi4g1v0461100.1
– ATP-dependent RNA helicase, putative; TAIR: AT1G48650.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|F4HYJ7|DEXH3_ARATH DExH-box ATP-dependent RNA helicase DExH3; TrEMBL-Plants: tr|I1KQG1|I1KQG1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0461100
Domains
34
LotjaGi5g1v0106200.1
– ATP-dependent RNA helicase; TAIR: AT2G35920.1 RNA helicase family protein; Swiss-Prot: sp|F4ILR7|DEXH1_ARATH DExH-box ATP-dependent RNA helicase DExH1; TrEMBL-Plants: tr|I1L9L1|I1L9L1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0106200
Domains
26
LotjaGi5g1v0106200.2
– ATP-dependent RNA helicase; TAIR: AT2G35920.1 RNA helicase family protein; Swiss-Prot: sp|F4ILR7|DEXH1_ARATH DExH-box ATP-dependent RNA helicase DExH1; TrEMBL-Plants: tr|K7K9K1|K7K9K1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0106200
Domains
26
LotjaGi5g1v0106200.3
– ATP-dependent RNA helicase; TAIR: AT2G35920.2 RNA helicase family protein; Swiss-Prot: sp|F4ILR7|DEXH1_ARATH DExH-box ATP-dependent RNA helicase DExH1; TrEMBL-Plants: tr|A0A0B2SVY7|A0A0B2SVY7_GLYSO Putative ATP-dependent RNA helicase DHX36; Found in the gene: LotjaGi5g1v0106200
Domains
29
LotjaGi5g1v0106200.4
– ATP-dependent RNA helicase; TAIR: AT2G35920.1 RNA helicase family protein; Swiss-Prot: sp|F4ILR7|DEXH1_ARATH DExH-box ATP-dependent RNA helicase DExH1; TrEMBL-Plants: tr|I1L9L1|I1L9L1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0106200
Domains
26
LotjaGi5g1v0106200.5
– ATP-dependent RNA helicase; TAIR: AT2G35920.1 RNA helicase family protein; Swiss-Prot: sp|F4ILR7|DEXH1_ARATH DExH-box ATP-dependent RNA helicase DExH1; TrEMBL-Plants: tr|I1L9L1|I1L9L1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0106200
Domains
26
LotjaGi5g1v0106200.6
– ATP-dependent RNA helicase; TAIR: AT2G35920.2 RNA helicase family protein; Swiss-Prot: sp|F4ILR7|DEXH1_ARATH DExH-box ATP-dependent RNA helicase DExH1; TrEMBL-Plants: tr|K7K9K1|K7K9K1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0106200
Domains
26
LotjaGi5g1v0250900.1
– ATP-dependent RNA helicase, putative; TAIR: AT2G47680.1 zinc finger (CCCH type) helicase family protein; Swiss-Prot: sp|O22243|C3H31_ARATH DExH-box ATP-dependent RNA helicase DExH8; TrEMBL-Plants: tr|G7IF63|G7IF63_MEDTR Zinc finger CCCH domain protein; Found in the gene: LotjaGi5g1v0250900
Domains
23
LotjaGi5g1v0333800.1
– ATP-dependent RNA helicase, putative; TAIR: AT2G01130.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|F4IM84|DEXH5_ARATH DExH-box ATP-dependent RNA helicase DExH5, mitochondrial; TrEMBL-Plants: tr|A0A151U761|A0A151U761_CAJCA Putative ATP-dependent RNA helicase DHX36; Found in the gene: LotjaGi5g1v0333800
Domains
30
LotjaGi5g1v0333800.2
– ATP-dependent RNA helicase, putative; TAIR: AT2G01130.1 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|F4IM84|DEXH5_ARATH DExH-box ATP-dependent RNA helicase DExH5, mitochondrial; TrEMBL-Plants: tr|A0A151U761|A0A151U761_CAJCA Putative ATP-dependent RNA helicase DHX36; Found in the gene: LotjaGi5g1v0333800
Domains
30
LotjaGi5g1v0333800.3
– ATP-dependent RNA helicase, putative; TAIR: AT2G01130.2 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|F4IM84|DEXH5_ARATH DExH-box ATP-dependent RNA helicase DExH5, mitochondrial; TrEMBL-Plants: tr|A0A151U761|A0A151U761_CAJCA Putative ATP-dependent RNA helicase DHX36; Found in the gene: LotjaGi5g1v0333800
Domains
30
LotjaGi5g1v0333800.4
– ATP-dependent RNA helicase, putative; TAIR: AT2G01130.2 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|F4IM84|DEXH5_ARATH DExH-box ATP-dependent RNA helicase DExH5, mitochondrial; TrEMBL-Plants: tr|A0A151U761|A0A151U761_CAJCA Putative ATP-dependent RNA helicase DHX36; Found in the gene: LotjaGi5g1v0333800
Domains
30
LotjaGi5g1v0333800.5
– ATP-dependent RNA helicase, putative; TAIR: AT2G01130.2 DEA(D/H)-box RNA helicase family protein; Swiss-Prot: sp|F4IM84|DEXH5_ARATH DExH-box ATP-dependent RNA helicase DExH5, mitochondrial; TrEMBL-Plants: tr|A0A151U761|A0A151U761_CAJCA Putative ATP-dependent RNA helicase DHX36; Found in the gene: LotjaGi5g1v0333800
Domains
27
LotjaGi5g1v0357200.1
– ATP-dependent RNA helicase, putative; TAIR: AT5G10370.1 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein; Swiss-Prot: sp|F4KGU4|DEAHC_ARATH ATP-dependent RNA helicase DEAH12, chloroplastic; TrEMBL-Plants: tr|G7J375|G7J375_MEDTR Helicase, IBR and zinc finger protein; Found in the gene: LotjaGi5g1v0357200
Domains
40
LotjaGi5g1v0357200.2
– ATP-dependent RNA helicase, putative; TAIR: AT5G10370.1 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein; Swiss-Prot: sp|F4KGU4|DEAHC_ARATH ATP-dependent RNA helicase DEAH12, chloroplastic; TrEMBL-Plants: tr|A0A0B2RGE0|A0A0B2RGE0_GLYSO Uncharacterized protein; Found in the gene: LotjaGi5g1v0357200
Domains
37
LotjaGi6g1v0090600.1
– ATP-dependent RNA helicase, putative; TAIR: AT5G10370.1 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein; Swiss-Prot: sp|F4KGU4|DEAHC_ARATH ATP-dependent RNA helicase DEAH12, chloroplastic; TrEMBL-Plants: tr|G7J375|G7J375_MEDTR Helicase, IBR and zinc finger protein; Found in the gene: LotjaGi6g1v0090600
Domains
40

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 4.00