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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ubiquitin protein ligase activity | Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Mitogen-activated protein kinase kinase kinase [Medicago truncatula] gi|357466667|ref|XP_003603618.1| | 6 | ||
| – | Mitogen-activated protein kinase kinase kinase [Medicago truncatula] gi|357466667|ref|XP_003603618.1| | 14 | ||
| – | RING/U-box superfamily protein; TAIR: AT5G11620.1 SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-like protein; Swiss-Prot: sp|Q62925|M3K1_RAT Mitogen-activated protein kinase kinase kinase 1; TrEMBL-Plants: tr|G7J3G2|G7J3G2_MEDTR SWIM zinc finger protein/MAP kinase kinase kinase (Mapkkk), putative; Found in the gene: LotjaGi1g1v0406000 | 14 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 33.33 |