Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PTHR22976

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0004076 View details of GO:0004076 AmiGO InterPro QuickGO	Molecular function	Biotin synthase activity	Catalysis of the reaction: 2 S-adenosyl-L-methionine + dethiobiotin + S(2-) = 2 5'-deoxyadenosine + 2 L-methionine + biotin + H(+).	Subterm of GO:0016783
GO:0009102 View details of GO:0009102 AmiGO InterPro QuickGO	Biological process	Biotin biosynthetic process	The chemical reactions and pathways resulting in the formation of biotin, cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid.	Subterm of GO:0006768 GO:0009108 GO:0018130 GO:0042364 GO:0043604 GO:0044272 GO:0072330 GO:1901362 GO:1901566

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
Lj3g3v3599460.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Biotin synthase [Medicago truncatula] gi\|357474135\|ref\|XP_003607352.1\|	Domains G3DSA:3.20.20.70 IPR002684 IPR006638 IPR007197 IPR010722 IPR013785 IPR024177 MF_01694 PF04055 PF06968 PIRSF001619 PTHR22976 PTHR22976:SF19 SFLDF00272 SFLDG01060 SFLDG01278 SM00729 SM00876 SSF102114 TIGR00433 cd01335	21
LotjaGi3g1v0535800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Biotin synthase; TAIR: AT2G43360.1 Radical SAM superfamily protein; Swiss-Prot: sp\|P54967\|BIOB_ARATH Biotin synthase; TrEMBL-Plants: tr\|A0A1J7GGN8\|A0A1J7GGN8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0535800	Domains G3DSA:3.20.20.70 IPR002684 IPR006638 IPR007197 IPR010722 IPR013785 IPR024177 MF_01694 PF04055 PF06968 PIRSF001619 PTHR22976 PTHR22976:SF2 SFLDF00272 SFLDG01278 SM00729 SM00876 SSF102114 TIGR00433 cd01335	20
LotjaGi3g1v0535800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Biotin synthase; TAIR: AT2G43360.1 Radical SAM superfamily protein; Swiss-Prot: sp\|P54967\|BIOB_ARATH Biotin synthase; TrEMBL-Plants: tr\|A0A1J7GGN8\|A0A1J7GGN8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0535800	Domains G3DSA:3.20.20.70 IPR002684 IPR006638 IPR007197 IPR010722 IPR013785 IPR024177 MF_01694 PF04055 PF06968 PIRSF001619 PTHR22976 PTHR22976:SF2 SFLDF00272 SFLDG01278 SM00729 SM00876 SSF102114 TIGR00433 cd01335	20
LotjaGi3g1v0535800.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Biotin synthase; TAIR: AT2G43360.1 Radical SAM superfamily protein; Swiss-Prot: sp\|P54967\|BIOB_ARATH Biotin synthase; TrEMBL-Plants: tr\|A0A1J7GGN8\|A0A1J7GGN8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0535800	Domains G3DSA:3.20.20.70 IPR002684 IPR006638 IPR007197 IPR010722 IPR013785 IPR024177 MF_01694 PF04055 PF06968 PIRSF001619 PTHR22976 PTHR22976:SF2 SFLDF00272 SFLDG01060 SM00729 SM00876 SSF102114 TIGR00433 cd01335	20

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd01335	CDD	1	25.00