Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

SM00729

Source: SMART

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0051536
Molecular function Iron-sulfur cluster binding Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
Subterm of

Associated Lotus transcripts 29

Transcript Name Description Predicted domains Domain count
Lj0g3v0131529.1
– PREDICTED: oxygen-independent coproporphyrinogen-III oxidase-like protein sll1917-like [Cicer arietinum] gi|502133605|ref|XP_004501826.1|
Domains
14
Lj0g3v0285609.1
– PREDICTED: elongator complex protein 3-like [Glycine max] gi|356508774|ref|XP_003523129.1|
Domains
23
Lj2g3v1728760.1
– PREDICTED: CDK5RAP1-like protein-like [Glycine max] gi|356540793|ref|XP_003538869.1|
Domains
33
Lj2g3v2585500.1
– PREDICTED: probable dual-specificity RNA methyltransferase RlmN-like [Cicer arietinum] gi|502097051|ref|XP_004490899.1|
Domains
22
Lj3g3v0930300.1
– PREDICTED: molybdopterin biosynthesis protein CNX2-like [Glycine max] gi|356525689|ref|XP_003531456.1|
Domains
16
Lj3g3v2780570.1
– PREDICTED: lipoyl synthase 2, mitochondrial-like [Glycine max] gi|356543805|ref|XP_003540350.1|
Domains
21
Lj3g3v3599460.1
– Biotin synthase [Medicago truncatula] gi|357474135|ref|XP_003607352.1|
Domains
21
Lj3g3v3755420.1
– PREDICTED: CDKAL1-like protein-like [Glycine max] gi|356542899|ref|XP_003539902.1|
Domains
29
Lj5g3v2240910.1
– PREDICTED: lipoyl synthase, chloroplastic-like [Glycine max] gi|356575490|ref|XP_003555873.1|
Domains
21
LotjaGi1g1v0090900.1
– Dual-specificity RNA methyltransferase RlmN; TAIR: AT2G39670.1 Radical SAM superfamily protein; Swiss-Prot: sp|Q8DG98|RLMN_THEEB Probable dual-specificity RNA methyltransferase RlmN; TrEMBL-Plants: tr|G7KBR0|G7KBR0_MEDTR 23S rRNA m2A2503 methyltransferase; Found in the gene: LotjaGi1g1v0090900
Domains
24
LotjaGi1g1v0234800.1
– Oxygen-independent coproporphyrinogen III oxidase, putative; TAIR: AT5G63290.1 Radical SAM superfamily protein; Swiss-Prot: sp|P73245|Y1917_SYNY3 Oxygen-independent coproporphyrinogen-III oxidase-like protein sll1917; TrEMBL-Plants: tr|V7AWC4|V7AWC4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0234800
Domains
14
LotjaGi1g1v0235100.1
– Elongator complex protein 3; TAIR: AT5G50320.1 radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein; Swiss-Prot: sp|Q93ZR1|ELP3_ARATH Elongator complex protein 3; TrEMBL-Plants: tr|A0A151R7U7|A0A151R7U7_CAJCA Elongator complex protein 3; Found in the gene: LotjaGi1g1v0235100
Domains
24
LotjaGi2g1v0385400.1
– TRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; TAIR: AT4G36390.1 Methylthiotransferase; Swiss-Prot: sp|Q8H0V1|CK5P1_ARATH CDK5RAP1-like protein; TrEMBL-Plants: tr|G7KGB3|G7KGB3_MEDTR Radical SAM methylthiotransferase, MiaB/RimO family protein; Found in the gene: LotjaGi2g1v0385400
Domains
28
LotjaGi2g1v0385400.2
– TRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; TAIR: AT4G36390.1 Methylthiotransferase; Swiss-Prot: sp|Q2R1U4|CK5P1_ORYSJ CDK5RAP1-like protein; TrEMBL-Plants: tr|K7LNH5|K7LNH5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0385400
Domains
26
LotjaGi2g1v0385400.3
– TRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; TAIR: AT4G36390.1 Methylthiotransferase; Swiss-Prot: sp|Q2R1U4|CK5P1_ORYSJ CDK5RAP1-like protein; TrEMBL-Plants: tr|K7LNH5|K7LNH5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0385400
Domains
26
LotjaGi2g1v0385400.4
– TRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; TAIR: AT4G36390.1 Methylthiotransferase; Swiss-Prot: sp|Q2R1U4|CK5P1_ORYSJ CDK5RAP1-like protein; TrEMBL-Plants: tr|K7LNH5|K7LNH5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0385400
Domains
26
LotjaGi3g1v0127600.1
– GTP 3',8-cyclase; TAIR: AT2G31955.1 cofactor of nitrate reductase and xanthine dehydrogenase 2; Swiss-Prot: sp|Q39055|CNX2_ARATH GTP 3',8-cyclase, mitochondrial; TrEMBL-Plants: tr|I1KTQ5|I1KTQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0127600
Domains
21
LotjaGi3g1v0127600.2
– GTP 3',8-cyclase; TAIR: AT2G31955.3 cofactor of nitrate reductase and xanthine dehydrogenase 2; Swiss-Prot: sp|Q39055|CNX2_ARATH GTP 3',8-cyclase, mitochondrial; TrEMBL-Plants: tr|I1KTQ5|I1KTQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0127600
Domains
15
LotjaGi3g1v0127600.3
– GTP 3',8-cyclase; TAIR: AT2G31955.3 cofactor of nitrate reductase and xanthine dehydrogenase 2; Swiss-Prot: sp|Q39055|CNX2_ARATH GTP 3',8-cyclase, mitochondrial; TrEMBL-Plants: tr|D7MW86|D7MW86_ARALL Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0127600
Domains
15
LotjaGi3g1v0127600.4
– GTP 3',8-cyclase; TAIR: AT2G31955.1 cofactor of nitrate reductase and xanthine dehydrogenase 2; Swiss-Prot: sp|Q39055|CNX2_ARATH GTP 3',8-cyclase, mitochondrial; TrEMBL-Plants: tr|I1KTQ5|I1KTQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0127600
Domains
21
LotjaGi3g1v0127600.5
– GTP 3',8-cyclase; TAIR: AT2G31955.1 cofactor of nitrate reductase and xanthine dehydrogenase 2; Swiss-Prot: sp|Q39055|CNX2_ARATH GTP 3',8-cyclase, mitochondrial; TrEMBL-Plants: tr|I1KTQ5|I1KTQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0127600
Domains
21
LotjaGi3g1v0441800.1
– Lipoyl synthase; TAIR: AT2G20860.1 lipoic acid synthase 1; Swiss-Prot: sp|B7FM45|LIAS_MEDTR Lipoyl synthase, mitochondrial; TrEMBL-Plants: tr|V7BWP4|V7BWP4_PHAVU Lipoyl synthase, mitochondrial; Found in the gene: LotjaGi3g1v0441800
Domains
21
LotjaGi3g1v0535800.1
– Biotin synthase; TAIR: AT2G43360.1 Radical SAM superfamily protein; Swiss-Prot: sp|P54967|BIOB_ARATH Biotin synthase; TrEMBL-Plants: tr|A0A1J7GGN8|A0A1J7GGN8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0535800
Domains
20
LotjaGi3g1v0535800.2
– Biotin synthase; TAIR: AT2G43360.1 Radical SAM superfamily protein; Swiss-Prot: sp|P54967|BIOB_ARATH Biotin synthase; TrEMBL-Plants: tr|A0A1J7GGN8|A0A1J7GGN8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0535800
Domains
20
LotjaGi3g1v0535800.3
– Biotin synthase; TAIR: AT2G43360.1 Radical SAM superfamily protein; Swiss-Prot: sp|P54967|BIOB_ARATH Biotin synthase; TrEMBL-Plants: tr|A0A1J7GGN8|A0A1J7GGN8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0535800
Domains
20
LotjaGi3g1v0556600.1
– TRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; TAIR: AT1G72090.1 Methylthiotransferase; Swiss-Prot: sp|Q6P4Y0|CDKAL_XENTR Threonylcarbamoyladenosine tRNA methylthiotransferase; TrEMBL-Plants: tr|I1LNN6|I1LNN6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0556600
Domains
29
LotjaGi3g1v0556600.2
– TRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; TAIR: AT1G72090.1 Methylthiotransferase; Swiss-Prot: sp|Q6NS26|CDKAL_XENLA Threonylcarbamoyladenosine tRNA methylthiotransferase; TrEMBL-Plants: tr|I1LNN6|I1LNN6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0556600
Domains
29
LotjaGi5g1v0345100.2
– Lipoyl synthase; TAIR: AT5G08415.1 Radical SAM superfamily protein; Swiss-Prot: sp|B9RX57|LISC_RICCO Lipoyl synthase, chloroplastic; TrEMBL-Plants: tr|A0A0R4J646|A0A0R4J646_SOYBN Lipoyl synthase, chloroplastic; Found in the gene: LotjaGi5g1v0345100
Domains
19
LotjaGi5g1v0345100.3
– Lipoyl synthase; TAIR: AT5G08415.1 Radical SAM superfamily protein; Swiss-Prot: sp|B9RX57|LISC_RICCO Lipoyl synthase, chloroplastic; TrEMBL-Plants: tr|A0A0R4J646|A0A0R4J646_SOYBN Lipoyl synthase, chloroplastic; Found in the gene: LotjaGi5g1v0345100
Domains
21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 3.45