Domain Predictions — View

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PTHR23076:SF92

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi4g1v0021600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT2G30950.4 FtsH extracellular protease family; Swiss-Prot: sp\|O80860\|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic; TrEMBL-Plants: tr\|V7CNS0\|V7CNS0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0021600	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.8.60 G3DSA:1.20.58.760 G3DSA:3.40.50.300 IPR000642 IPR003593 IPR003959 IPR003960 IPR005936 IPR027417 IPR037219 IPR041569 MF_01458 NON_CYTOPLASMIC_DOMAIN PF00004 PF01434 PF17862 PS00674 PTHR23076 PTHR23076:SF92 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00382 SSF140990 SSF52540 TIGR01241 TMhelix TRANSMEMBRANE cd00009	31
LotjaGi4g1v0021600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT2G30950.4 FtsH extracellular protease family; Swiss-Prot: sp\|O80860\|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic; TrEMBL-Plants: tr\|V7CNS0\|V7CNS0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0021600	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.8.60 G3DSA:1.20.58.760 G3DSA:3.40.50.300 IPR000642 IPR003593 IPR003959 IPR003960 IPR005936 IPR027417 IPR037219 IPR041569 MF_01458 NON_CYTOPLASMIC_DOMAIN PF00004 PF01434 PF17862 PS00674 PTHR23076 PTHR23076:SF92 SM00382 SSF140990 SSF52540 TIGR01241 TMhelix TRANSMEMBRANE cd00009	27
LotjaGi4g1v0021600.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT2G30950.1 FtsH extracellular protease family; Swiss-Prot: sp\|O80860\|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic; TrEMBL-Plants: tr\|A0A1J7GJK4\|A0A1J7GJK4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0021600	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.8.60 G3DSA:1.20.58.760 G3DSA:3.40.50.300 IPR000642 IPR003593 IPR003959 IPR003960 IPR005936 IPR027417 IPR037219 IPR041569 MF_01458 NON_CYTOPLASMIC_DOMAIN PF00004 PF01434 PF17862 PS00674 PTHR23076 PTHR23076:SF92 SM00382 SSF140990 SSF52540 TIGR01241 TMhelix TRANSMEMBRANE cd00009	27
LotjaGi4g1v0021600.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT2G30950.4 FtsH extracellular protease family; Swiss-Prot: sp\|Q655S1\|FTSH2_ORYSJ ATP-dependent zinc metalloprotease FTSH 2, chloroplastic; TrEMBL-Plants: tr\|A0A1J7GJK4\|A0A1J7GJK4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0021600	Domains G3DSA:1.10.8.60 G3DSA:1.20.58.760 G3DSA:3.40.50.300 IPR000642 IPR003593 IPR003959 IPR003960 IPR005936 IPR027417 IPR037219 IPR041569 PF00004 PF01434 PF17862 PS00674 PTHR23076 PTHR23076:SF92 SM00382 SSF140990 SSF52540 TIGR01241 cd00009	22
LotjaGi4g1v0021600.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT1G06430.1 FTSH protease 8; Swiss-Prot: sp\|Q655S1\|FTSH2_ORYSJ ATP-dependent zinc metalloprotease FTSH 2, chloroplastic; TrEMBL-Plants: tr\|I1K360\|I1K360_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0021600	Domains G3DSA:1.10.8.60 G3DSA:1.20.58.760 G3DSA:3.40.50.300 IPR000642 IPR003593 IPR003959 IPR003960 IPR005936 IPR027417 IPR037219 IPR041569 PF00004 PF01434 PF17862 PS00674 PTHR23076 PTHR23076:SF92 SM00382 SSF140990 SSF52540 TIGR01241 cd00009	22
LotjaGi6g1v0242400.10 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT2G30950.4 FtsH extracellular protease family; Swiss-Prot: sp\|O80860\|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic; TrEMBL-Plants: tr\|A0A0S3RI72\|A0A0S3RI72_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0242400	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.8.60 G3DSA:1.20.58.760 G3DSA:3.40.50.300 IPR000642 IPR003593 IPR003959 IPR003960 IPR005936 IPR027417 IPR037219 IPR041569 MF_01458 NON_CYTOPLASMIC_DOMAIN PF00004 PF01434 PF17862 PS00674 PTHR23076 PTHR23076:SF92 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00382 SSF140990 SSF52540 SignalP-TM SignalP-noTM TIGR01241 TMhelix TRANSMEMBRANE cd00009	33
LotjaGi6g1v0242400.9 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT2G30950.4 FtsH extracellular protease family; Swiss-Prot: sp\|O80860\|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic; TrEMBL-Plants: tr\|A0A0S3RI72\|A0A0S3RI72_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0242400	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.8.60 G3DSA:1.20.58.760 G3DSA:3.40.50.300 IPR000642 IPR003593 IPR003959 IPR003960 IPR005936 IPR027417 IPR037219 IPR041569 MF_01458 NON_CYTOPLASMIC_DOMAIN PF00004 PF01434 PF17862 PS00674 PTHR23076 PTHR23076:SF92 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00382 SSF140990 SSF52540 TIGR01241 TMhelix TRANSMEMBRANE cd00009 mobidb-lite	32

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	14.29