Domain Predictions — View

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PTHR24221:SF245

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
Lj3g3v1011060.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ABC transporter B family member [Medicago truncatula] gi\|357474799\|ref\|XP_003607685.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1560.10 G3DSA:3.40.50.300 IPR003439 IPR003593 IPR011527 IPR017871 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00005 PF00664 PS00211 PS50893 PS50929 PTHR24221 PTHR24221:SF245 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00382 SSF52540 SSF90123 TMhelix TRANSMEMBRANE cd03249	26
LotjaGi3g1v0150300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ABC transporter ATP-binding protein; TAIR: AT3G28345.1 ABC transporter family protein; Swiss-Prot: sp\|Q6YUU5\|MDR_ORYSJ Putative multidrug resistance protein; TrEMBL-Plants: tr\|K7LUK7\|K7LUK7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0150300	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1560.10 G3DSA:3.40.50.300 IPR003439 IPR003593 IPR011527 IPR017871 IPR027417 IPR036640 IPR039421 NON_CYTOPLASMIC_DOMAIN PF00005 PF00664 PS00211 PS50893 PS50929 PTHR24221 PTHR24221:SF245 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00382 SSF52540 SSF90123 TMhelix TRANSMEMBRANE cd03249 cd18577 cd18578	30
LotjaGi3g1v0150300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-binding cassette transporter; TAIR: AT3G28415.1 ABC transporter family protein; Swiss-Prot: sp\|Q9LSJ2\|AB22B_ARATH ABC transporter B family member 22; TrEMBL-Plants: tr\|G7JF16\|G7JF16_MEDTR ABC transporter B family protein; Found in the gene: LotjaGi3g1v0150300	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1560.10 G3DSA:3.40.50.300 IPR003439 IPR027417 IPR036640 IPR039421 NON_CYTOPLASMIC_DOMAIN PF00005 PTHR24221 PTHR24221:SF245 SSF52540 TRANSMEMBRANE cd18577	14
LotjaGi3g1v0150300.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-binding cassette transporter; TAIR: AT3G28345.1 ABC transporter family protein; Swiss-Prot: sp\|Q9LHD1\|AB15B_ARATH ABC transporter B family member 15; TrEMBL-Plants: tr\|G7JF16\|G7JF16_MEDTR ABC transporter B family protein; Found in the gene: LotjaGi3g1v0150300	Domains G3DSA:1.20.1560.10 G3DSA:3.40.50.300 IPR003439 IPR027417 IPR036640 IPR039421 NON_CYTOPLASMIC_DOMAIN PF00005 PTHR24221 PTHR24221:SF245 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52540	15

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SSF52540	SUPERFAMILY	1	25.00