Domain Predictions — View

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PTHR30128

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 8

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0054159.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Photosystem I P700 chlorophyll a apoprotein A2 [Lotus japonicus] gi\|13518429\|ref\|NP_084789.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1130.10 IPR001280 IPR006244 IPR020586 MF_00482 NON_CYTOPLASMIC_DOMAIN PF00223 PIRSF002905 PR00257 PS00419 PTHR30128 PTHR30128:SF4 SSF81558 TIGR01336 TMhelix TRANSMEMBRANE	17
Lj0g3v0054169.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Photosystem I P700 chlorophyll a apoprotein A1 [Lotus japonicus] gi\|13518428\|ref\|NP_084788.1\|	Domains G3DSA:1.20.1130.10 IPR001280 PF00223 PTHR30128 PTHR30128:SF8 SSF81558	6
Lj3g3v0290200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Photosystem I P700 chlorophyll a apoprotein A2 [Lotus japonicus] gi\|13518429\|ref\|NP_084789.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1130.10 IPR001280 IPR006244 IPR020586 NON_CYTOPLASMIC_DOMAIN PF00223 PR00257 PS00419 PTHR30128 PTHR30128:SF7 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF81558 SignalP-noTM_EUK TIGR01336 TMhelix TRANSMEMBRANE	20
Ljchlorog3v0000180.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Photosystem I P700 chlorophyll a apoprotein A1 [Lotus japonicus] gi\|13518428\|ref\|NP_084788.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1130.10 IPR001280 IPR006243 NON_CYTOPLASMIC_DOMAIN PF00223 PR00257 PTHR30128 PTHR30128:SF8 SSF81558 TIGR01335 TMhelix TRANSMEMBRANE	13
LotjaGi3g1v0022000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Photosystem I P700 chlorophyll a apoprotein A2; TAIR: ATCG00340.1 Photosystem I, PsaA/PsaB protein (ChrC); Swiss-Prot: sp\|P58385\|PSAB_LOTJA Photosystem I P700 chlorophyll a apoprotein A2; TrEMBL-Plants: tr\|A0A178W009\|A0A178W009_ARATH PSAB; Found in the gene: LotjaGi3g1v0022000	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1130.10 IPR001280 IPR006244 IPR020586 IPR036408 NON_CYTOPLASMIC_DOMAIN PF00223 PR00257 PS00419 PTHR30128 PTHR30128:SF46 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF81558 SignalP-noTM TIGR01336 TMhelix TRANSMEMBRANE	21
LotjaGi3g1v0022000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Photosystem I P700 chlorophyll a apoprotein A2; TAIR: ATCG00340.1 Photosystem I, PsaA/PsaB protein (ChrC); Swiss-Prot: sp\|P58385\|PSAB_LOTJA Photosystem I P700 chlorophyll a apoprotein A2; TrEMBL-Plants: tr\|A0A178W009\|A0A178W009_ARATH PSAB; Found in the gene: LotjaGi3g1v0022000	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1130.10 IPR001280 IPR006244 IPR020586 IPR036408 NON_CYTOPLASMIC_DOMAIN PF00223 PR00257 PS00419 PTHR30128 PTHR30128:SF46 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF81558 SignalP-noTM TIGR01336 TMhelix TRANSMEMBRANE	21
LotjaGi3g1v0022000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Photosystem I P700 chlorophyll a apoprotein A2; TAIR: ATCG00340.1 Photosystem I, PsaA/PsaB protein (ChrC); Swiss-Prot: sp\|P58385\|PSAB_LOTJA Photosystem I P700 chlorophyll a apoprotein A2; TrEMBL-Plants: tr\|A0A178W009\|A0A178W009_ARATH PSAB; Found in the gene: LotjaGi3g1v0022000	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1130.10 IPR001280 IPR006244 IPR020586 IPR036408 NON_CYTOPLASMIC_DOMAIN PF00223 PR00257 PS00419 PTHR30128 PTHR30128:SF46 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF81558 SignalP-noTM TIGR01336 TMhelix TRANSMEMBRANE	21
LotjaGi3g1v0022000.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Photosystem I P700 chlorophyll a apoprotein A2; TAIR: ATCG00340.1 Photosystem I, PsaA/PsaB protein (ChrC); Swiss-Prot: sp\|P58385\|PSAB_LOTJA Photosystem I P700 chlorophyll a apoprotein A2; TrEMBL-Plants: tr\|A0A0K0LWC0\|A0A0K0LWC0_9FABA Photosystem I P700 chlorophyll a apoprotein A2; Found in the gene: LotjaGi3g1v0022000	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1130.10 IPR001280 IPR006244 IPR020586 IPR036408 NON_CYTOPLASMIC_DOMAIN PF00223 PR00257 PS00419 PTHR30128 PTHR30128:SF46 SSF81558 TIGR01336 TMhelix TRANSMEMBRANE	16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	12.50