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G3DSA:1.20.1130.10

Source: Gene3D

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0009579
Cellular component Thylakoid A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.
Subterm of
GO:0015979
Biological process Photosynthesis The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
Subterm of
GO:0016021
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
Subterm of

Associated Lotus transcripts 13

Transcript Name Description Predicted domains Domain count
Lj0g3v0054159.1
– Photosystem I P700 chlorophyll a apoprotein A2 [Lotus japonicus] gi|13518429|ref|NP_084789.1|
Domains
17
Lj0g3v0054169.1
– Photosystem I P700 chlorophyll a apoprotein A1 [Lotus japonicus] gi|13518428|ref|NP_084788.1|
Domains
6
Lj0g3v0243889.1
– Photosystem I P700 apoprotein A1, partial (chloroplast) [Camellia sinensis] gi|403065237|gb|AFR13040.1|
Domains
5
Lj3g3v0290200.1
– Photosystem I P700 chlorophyll a apoprotein A2 [Lotus japonicus] gi|13518429|ref|NP_084789.1|
Domains
20
Lj4g3v0120130.1
– PREDICTED: transcription initiation factor IIF subunit alpha-like [Glycine max] gi|356555722|ref|XP_003546179.1|
Domains
11
Lj4g3v0120130.2
– PREDICTED: transcription initiation factor IIF subunit alpha-like [Glycine max] gi|356555722|ref|XP_003546179.1|
Domains
11
Lj4g3v0120130.3
– PREDICTED: transcription initiation factor IIF subunit alpha-like [Glycine max] gi|356555722|ref|XP_003546179.1|
Domains
11
Lj6g3v1766610.1
– PREDICTED: transcription initiation factor IIF subunit alpha-like isoform X1 [Cicer arietinum] gi|502079291|ref|XP_004486214.1|
Domains
8
Ljchlorog3v0000180.1
– Photosystem I P700 chlorophyll a apoprotein A1 [Lotus japonicus] gi|13518428|ref|NP_084788.1|
Domains
13
LotjaGi3g1v0022000.1
– Photosystem I P700 chlorophyll a apoprotein A2; TAIR: ATCG00340.1 Photosystem I, PsaA/PsaB protein (ChrC); Swiss-Prot: sp|P58385|PSAB_LOTJA Photosystem I P700 chlorophyll a apoprotein A2; TrEMBL-Plants: tr|A0A178W009|A0A178W009_ARATH PSAB; Found in the gene: LotjaGi3g1v0022000
Domains
21
LotjaGi3g1v0022000.2
– Photosystem I P700 chlorophyll a apoprotein A2; TAIR: ATCG00340.1 Photosystem I, PsaA/PsaB protein (ChrC); Swiss-Prot: sp|P58385|PSAB_LOTJA Photosystem I P700 chlorophyll a apoprotein A2; TrEMBL-Plants: tr|A0A178W009|A0A178W009_ARATH PSAB; Found in the gene: LotjaGi3g1v0022000
Domains
21
LotjaGi3g1v0022000.3
– Photosystem I P700 chlorophyll a apoprotein A2; TAIR: ATCG00340.1 Photosystem I, PsaA/PsaB protein (ChrC); Swiss-Prot: sp|P58385|PSAB_LOTJA Photosystem I P700 chlorophyll a apoprotein A2; TrEMBL-Plants: tr|A0A178W009|A0A178W009_ARATH PSAB; Found in the gene: LotjaGi3g1v0022000
Domains
21
LotjaGi3g1v0022000.4
– Photosystem I P700 chlorophyll a apoprotein A2; TAIR: ATCG00340.1 Photosystem I, PsaA/PsaB protein (ChrC); Swiss-Prot: sp|P58385|PSAB_LOTJA Photosystem I P700 chlorophyll a apoprotein A2; TrEMBL-Plants: tr|A0A0K0LWC0|A0A0K0LWC0_9FABA Photosystem I P700 chlorophyll a apoprotein A2; Found in the gene: LotjaGi3g1v0022000
Domains
16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TRANSMEMBRANE Phobius 1 7.69