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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Response to gibberellin | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gibberellin stimulus. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: scarecrow-like protein 3-like [Glycine max] gi|356541514|ref|XP_003539220.1| | 6 | ||
| – | PREDICTED: LOW QUALITY PROTEIN: scarecrow-like protein 3-like, partial [Glycine max] gi|356541516|ref|XP_003539221.1| | 6 | ||
| – | PREDICTED: scarecrow-like protein 3-like [Cicer arietinum] gi|502184152|ref|XP_004517294.1| | 6 | ||
| – | PREDICTED: scarecrow-like protein 3-like [Glycine max] gi|356508428|ref|XP_003522959.1| | 6 | ||
| – | PREDICTED: scarecrow-like protein 3-like [Glycine max] gi|356508428|ref|XP_003522959.1| | 6 | ||
| – | 7 | |||
| – | PREDICTED: LOW QUALITY PROTEIN: scarecrow-like protein 3-like, partial [Glycine max] gi|356541516|ref|XP_003539221.1| | 6 | ||
| – | PREDICTED: scarecrow-like protein 3-like [Glycine max] gi|356538508|ref|XP_003537745.1| | 7 | ||
| – | PREDICTED: scarecrow-like protein 3-like [Glycine max] gi|356508428|ref|XP_003522959.1| | 6 | ||
| – | GAI-like protein 1; TAIR: AT1G50420.1 scarecrow-like 3; Swiss-Prot: sp|Q9LPR8|SCL3_ARATH Scarecrow-like protein 3; TrEMBL-Plants: tr|V7BSM2|V7BSM2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0115500_LC | 5 | ||
| – | GAI-like protein 1; TAIR: AT1G50420.1 scarecrow-like 3; Swiss-Prot: sp|Q9LPR8|SCL3_ARATH Scarecrow-like protein 3; TrEMBL-Plants: tr|V7BSM2|V7BSM2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0115500_LC | 5 | ||
| – | GRAS family transcription factor; TAIR: AT1G50420.1 scarecrow-like 3; Swiss-Prot: sp|Q9LPR8|SCL3_ARATH Scarecrow-like protein 3; TrEMBL-Plants: tr|V7BSM2|V7BSM2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0115700_LC | 5 | ||
| – | GRAS family transcription factor; TAIR: AT1G50420.1 scarecrow-like 3; Swiss-Prot: sp|Q9LPR8|SCL3_ARATH Scarecrow-like protein 3; TrEMBL-Plants: tr|V7BVF7|V7BVF7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0115800 | 5 | ||
| – | GRAS family transcription factor; TAIR: AT1G50420.1 scarecrow-like 3; Swiss-Prot: sp|Q9LPR8|SCL3_ARATH Scarecrow-like protein 3; TrEMBL-Plants: tr|V7AHA1|V7AHA1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0545500 | 5 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| PTHR31636:SF48 | PANTHER | 1 | 7.14 |