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PTHR34482:SF11

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 8

Transcript Name Description Predicted domains Domain count
LotjaGi1g1v0233500_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT1G67020.1 transmembrane protein; Swiss-Prot: sp|P17757|POL_HV2D1 Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A061FHZ8|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi1g1v0233500_LC
Domains
12
LotjaGi4g1v0124100_LC.1
– Gag polyprotein; TAIR: AT3G55340.1 phragmoplastin interacting protein 1; Swiss-Prot: sp|P12502|POL_SIVS4 Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A061FHZ8|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi4g1v0124100_LC
Domains
12
LotjaGi4g1v0156300_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT3G43590.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A061FQP6|A0A061FQP6_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi4g1v0156300_LC
Domains
12
LotjaGi4g1v0434500_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT1G67020.1 transmembrane protein; Swiss-Prot: sp|Q8AWC3|ARC_CHICK Activity-regulated cytoskeleton-associated protein; TrEMBL-Plants: tr|A0A061FHZ8|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi4g1v0434500_LC
Domains
5
LotjaGi4g1v0434500_LC.2
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT1G67020.1 transmembrane protein; Swiss-Prot: sp|Q8AWC3|ARC_CHICK Activity-regulated cytoskeleton-associated protein; TrEMBL-Plants: tr|A0A061FHZ8|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi4g1v0434500_LC
Domains
5
LotjaGi4g1v0434500_LC.3
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT1G67020.1 transmembrane protein; Swiss-Prot: sp|Q8AWC3|ARC_CHICK Activity-regulated cytoskeleton-associated protein; TrEMBL-Plants: tr|A0A061FHZ8|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi4g1v0434500_LC
Domains
5
LotjaGi6g1v0046800.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT3G02820.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P12451|POL_HV2SB Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A061FHZ8|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0046800
Domains
12
LotjaGi6g1v0218100_LC.5
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT3G02820.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P12451|POL_HV2SB Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A061FHZ8|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC
Domains
12

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 12.50