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PS50158

Source: ProSiteProfiles

Description

Zinc finger CCHC-type profile.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003676
Molecular function Nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
Subterm of
GO:0008270
Molecular function Zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
Subterm of

Associated Lotus transcripts 321

Transcript Name Description Predicted domains Domain count
Lj0g3v0032889.1
– Cellular nucleic acid-binding protein [Medicago truncatula] gi|357459751|ref|XP_003600156.1|
Domains
15
Lj0g3v0045599.1
– Uncharacterized protein TCM_020721 [Theobroma cacao] gi|508713924|gb|EOY05821.1|
Domains
8
Lj0g3v0064879.1
– Non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis thaliana] gi|9294088|dbj|BAB01940.1|
Domains
7
Lj0g3v0077989.1
– Uncharacterized protein TCM_020721 [Theobroma cacao] gi|508713924|gb|EOY05821.1|
Domains
11
Lj0g3v0092629.1
– PREDICTED: serine/arginine-rich splicing factor RSZ21-like isoform X1 [Cicer arietinum] gi|502154791|ref|XP_004509838.1|
Domains
16
Lj0g3v0117509.1
– Os02g0536400 [Oryza sativa Japonica Group] gi|115446527|ref|NP_001047043.1|
Domains
7
Lj0g3v0121939.1
– Glycine-rich RNA-binding protein [Medicago truncatula] gi|357445711|ref|XP_003593133.1|
Domains
15
Lj0g3v0133329.1
– Uncharacterized protein TCM_020721 [Theobroma cacao] gi|508713924|gb|EOY05821.1|
Domains
6
Lj0g3v0136879.1
– Putative retrovirus-related pol polyprotein [Oryza sativa Japonica Group] gi|27436748|gb|AAO13467.1|
Domains
8
Lj0g3v0161339.1
– Non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis thaliana] gi|9294088|dbj|BAB01940.1|
Domains
5
Lj0g3v0209789.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
5
Lj0g3v0224539.1
– Non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis thaliana] gi|9294088|dbj|BAB01940.1|
Domains
7
Lj0g3v0227069.1
–
Domains
9
Lj0g3v0237009.1
– Polyprotein [Drosophila melanogaster] gi|1030731|emb|CAA32198.1|
Domains
5
Lj0g3v0247229.1
–
Domains
7
Lj0g3v0247539.1
– LRR receptor-like serine/threonine-protein kinase FLS2 [Aegilops tauschii] gi|475543050|gb|EMT10072.1|
Domains
7
Lj0g3v0254499.1
– PREDICTED: zinc finger protein GIS2-like [Glycine max] gi|356516892|ref|XP_003527126.1|
Domains
9
Lj0g3v0255829.1
– Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|357508407|ref|XP_003624492.1|
Domains
4
Lj0g3v0265119.1
– PREDICTED: chromosome segregation in meiosis protein 3-like [Cicer arietinum] gi|502144460|ref|XP_004505705.1|
Domains
11
Lj0g3v0279609.1
– PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max] gi|356576739|ref|XP_003556487.1|
Domains
11
Lj0g3v0279609.2
– PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max] gi|356576739|ref|XP_003556487.1|
Domains
13
Lj0g3v0280599.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
6
Lj0g3v0282989.1
– Non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis thaliana] gi|9294088|dbj|BAB01940.1|
Domains
8
Lj0g3v0286639.2
– Peptidyl-prolyl cis-trans isomerase [Medicago truncatula] gi|358345178|ref|XP_003636659.1|
Domains
18
Lj0g3v0289519.1
– Gag-pol polyprotein [Phaseolus vulgaris] gi|38194910|gb|AAR13298.1|
Domains
10
Lj0g3v0298079.1
– Zinc ion binding / nucleic acid binding protein [Arabidopsis thaliana] gi|15226168|ref|NP_178215.1|
Domains
5
Lj0g3v0303019.1
– Zinc finger CCHC domain-containing protein [Medicago truncatula] gi|358346605|ref|XP_003637357.1|
Domains
7
Lj0g3v0315649.1
– Polyprotein-like [Solanum chilense] gi|13540823|gb|AAK29467.1|
Domains
7
Lj0g3v0325539.1
– PREDICTED: cysteine desulfurase 1, mitochondrial [Vitis vinifera] gi|359495673|ref|XP_003635054.1|
Domains
8
Lj0g3v0327329.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
9
Lj0g3v0330499.1
– Uncharacterized protein TCM_020721 [Theobroma cacao] gi|508713924|gb|EOY05821.1|
Domains
8
Lj0g3v0332139.1
– Uncharacterized protein TCM_020721 [Theobroma cacao] gi|508713924|gb|EOY05821.1|
Domains
7
Lj0g3v0337399.1
– Zinc ion binding / nucleic acid binding protein [Arabidopsis thaliana] gi|15226168|ref|NP_178215.1|
Domains
8
Lj0g3v0340399.1
– Non-ltr retroelement reverse transcriptase [Rosa rugosa] gi|399920227|gb|AFP55574.1|
Domains
8
Lj0g3v0343349.1
– Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|357508407|ref|XP_003624492.1|
Domains
4
Lj0g3v0349299.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
7
Lj0g3v0356429.1
– Non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis thaliana] gi|9294088|dbj|BAB01940.1|
Domains
7
Lj0g3v0360419.1
– Uncharacterized protein TCM_010233 [Theobroma cacao] gi|508708474|gb|EOY00371.1|
Domains
7
Lj0g3v0362299.1
– Ty1/copia-element polyprotein [Arabidopsis thaliana] gi|12322504|gb|AAG51258.1|AC025782_3
Domains
6
Lj0g3v0362829.1
– RNA-binding protein 44 [Myotis davidii] gi|432107222|gb|ELK32636.1|
Domains
8
Lj1g3v2611550.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
7
Lj1g3v2627360.1
– PREDICTED: nucleolin 1-like [Cicer arietinum] gi|502104996|ref|XP_004492695.1|
Domains
3
Lj1g3v3368890.1
– PREDICTED: zinc finger protein GIS2-like [Glycine max] gi|356516892|ref|XP_003527126.1|
Domains
9
Lj1g3v3368890.2
– PREDICTED: zinc finger protein GIS2-like [Glycine max] gi|356508208|ref|XP_003522851.1|
Domains
10
Lj1g3v3608370.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
5
Lj1g3v3892220.1
– Ty1-copia retrotransposon protein [Cucumis melo subsp]. melo] gi|307135946|gb|ADN33807.1|
Domains
8
Lj1g3v4204450.1
– Non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis thaliana] gi|9294088|dbj|BAB01940.1|
Domains
7
Lj1g3v4578710.1
– PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cicer arietinum] gi|502110926|ref|XP_004493914.1|
Domains
15
Lj1g3v4578710.2
– PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X4 [Cicer arietinum] gi|502110938|ref|XP_004493917.1|
Domains
11
Lj1g3v4578710.3
– PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cicer arietinum] gi|502110926|ref|XP_004493914.1|
Domains
15
Lj1g3v4578710.4
– PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X3 [Cicer arietinum] gi|502110934|ref|XP_004493916.1|
Domains
15
Lj1g3v4819930.1
– PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Glycine max] gi|356505715|ref|XP_003521635.1|
Domains
28
Lj1g3v4834100.1
–
Domains
7
Lj1g3v4957670.1
– PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max] gi|356505926|ref|XP_003521740.1|
Domains
12
Lj1g3v5035030.1
– Contains similarity to gag proteins [Arabidopsis thaliana] gi|2252849|gb|AAB62847.1|
Domains
6
Lj2g3v0766560.1
– Uncharacterized protein TCM_020721 [Theobroma cacao] gi|508713924|gb|EOY05821.1|
Domains
6
Lj2g3v0780560.1
– PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Glycine max] gi|356505847|ref|XP_003521701.1|
Domains
25
Lj2g3v1364760.1
– MYB transcription factor MYB138 [Glycine max] gi|351722587|ref|NP_001237761.1|
Domains
16
Lj2g3v1548460.1
– PREDICTED: replication protein A 70 kDa DNA-binding subunit-like [Cicer arietinum] gi|502162127|ref|XP_004512401.1|
Domains
19
Lj2g3v1925650.1
– Uncharacterized protein TCM_014510 [Theobroma cacao] gi|508775036|gb|EOY22292.1|
Domains
7
Lj2g3v2905060.1
– CM0545.280.nc [Lotus japonicus] gi|164605536|dbj|BAF98602.1|
Domains
9
Lj2g3v2905060.2
– CM0545.270.nc [Lotus japonicus] gi|164605537|dbj|BAF98603.1|
Domains
8
Lj3g3v0755250.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
7
Lj3g3v1048970.1
– Uncharacterized protein TCM_020721 [Theobroma cacao] gi|508713924|gb|EOY05821.1|
Domains
9
Lj3g3v1131090.1
– Gag non-LTR retrotransposase [Arabidopsis cebennensis] gi|158828302|gb|ABW81177.1|
Domains
7
Lj3g3v1788930.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
8
Lj3g3v3261430.1
– Uncharacterized protein TCM_020721 [Theobroma cacao] gi|508713924|gb|EOY05821.1|
Domains
10
Lj3g3v3386780.1
– PREDICTED: probable E3 ubiquitin-protein ligase ARI7-like [Glycine max] gi|356544392|ref|XP_003540636.1|
Domains
11
Lj3g3v3476790.1
– PREDICTED: glycine-rich protein 2-like [Cicer arietinum] gi|502144859|ref|XP_004505774.1|
Domains
16
Lj3g3v3525960.1
– PREDICTED: chromosome segregation in meiosis protein 3-like [Cicer arietinum] gi|502144460|ref|XP_004505705.1|
Domains
11
Lj3g3v3725550.1
– PREDICTED: branchpoint-bridging protein-like isoform X1 [Cicer arietinum] gi|502169018|ref|XP_004514517.1|
Domains
27
Lj4g3v0166280.1
– Uncharacterized protein TCM_014510 [Theobroma cacao] gi|508775036|gb|EOY22292.1|
Domains
6
Lj4g3v0336370.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
8
Lj4g3v0336700.1
– Glycine-rich RNA-binding protein [Medicago truncatula] gi|357445711|ref|XP_003593133.1|
Domains
15
Lj4g3v0877820.1
– Retroelement pol polyprotein-like [Arabidopsis thaliana] gi|8843739|dbj|BAA97287.1|
Domains
7
Lj4g3v1037760.1
– PREDICTED: cold shock protein 1-like [Cicer arietinum] gi|502153508|ref|XP_004509364.1|
Domains
20
Lj4g3v1037770.1
– PREDICTED: DNA-binding protein HEXBP-like [Glycine max] gi|356559280|ref|XP_003547928.1|
Domains
19
Lj4g3v1154380.1
– Zinc finger, CCHC-type-like protein [Theobroma cacao] gi|508727954|gb|EOY19851.1|
Domains
8
Lj4g3v1327720.1
– FAR1-related protein [Medicago truncatula] gi|357463693|ref|XP_003602128.1|
Domains
6
Lj4g3v1327730.2
–
Domains
7
Lj4g3v2801600.1
– RNA-directed DNA polymerase [Arachis hypogaea] gi|342365825|gb|AEL30359.1|
Domains
7
Lj4g3v2847410.1
– Uncharacterized protein TCM_020721 [Theobroma cacao] gi|508713924|gb|EOY05821.1|
Domains
9
Lj4g3v3016310.1
– MYB transcription factor MYB127 [Glycine max] gi|351721742|ref|NP_001235940.1|
Domains
16
Lj5g3v0035380.1
– PREDICTED: cysteine desulfurase 1, mitochondrial [Vitis vinifera] gi|359495673|ref|XP_003635054.1|
Domains
8
Lj5g3v0175560.1
– PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max] gi|356562399|ref|XP_003549459.1|
Domains
15
Lj5g3v0175560.2
– PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max] gi|356562399|ref|XP_003549459.1|
Domains
15
Lj5g3v0610950.2
– PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine max] gi|356552596|ref|XP_003544651.1|
Domains
16
Lj5g3v0610950.3
– PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine max] gi|356552596|ref|XP_003544651.1|
Domains
14
Lj5g3v0659690.1
– Orf120b [Beta vulgaris subsp]. vulgaris] gi|54606737|dbj|BAD66760.1|
Domains
5
Lj5g3v1003540.1
– FAR1-related protein [Medicago truncatula] gi|357463693|ref|XP_003602128.1|
Domains
7
Lj5g3v1004040.1
– Uncharacterized protein TCM_023639 [Theobroma cacao] gi|508716765|gb|EOY08662.1|
Domains
7
Lj5g3v1452250.1
– PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3 [Vitis vinifera] gi|359495203|ref|XP_002263507.2|
Domains
8
Lj5g3v1533550.1
– PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Glycine max] gi|356574052|ref|XP_003555166.1|
Domains
28
Lj5g3v2013630.1
– PREDICTED: DNA-binding protein HEXBP-like [Cicer arietinum] gi|502119274|ref|XP_004496562.1|
Domains
11
Lj5g3v2219240.1
– PREDICTED: TATA-binding protein-associated factor 2N-like isoform X1 [Cicer arietinum] gi|502120901|ref|XP_004497120.1|
Domains
15
Lj5g3v2258450.1
– PREDICTED: CAX-interacting protein 4-like isoform 1 [Glycine max] gi|356536406|ref|XP_003536729.1|
Domains
7
Lj5g3v2265250.1
– PREDICTED: nucleolar protein 13-like [Glycine max] gi|356536490|ref|XP_003536770.1|
Domains
20
Lj6g3v0727730.1
– Zinc ion binding / nucleic acid binding protein [Arabidopsis thaliana] gi|15226168|ref|NP_178215.1|
Domains
7
Lj6g3v1038840.1
– Cellular nucleic acid-binding protein [Medicago truncatula] gi|357493439|ref|XP_003617008.1|
Domains
10
Lj6g3v1038840.2
– Cellular nucleic acid-binding protein [Medicago truncatula] gi|357493439|ref|XP_003617008.1|
Domains
10
Lj6g3v1571420.1
– PREDICTED: nuclear export mediator factor NEMF-like isoform X1 [Cicer arietinum] gi|502080302|ref|XP_004486521.1|
Domains
13
Lj6g3v2017470.1
– Non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis thaliana] gi|9294088|dbj|BAB01940.1|
Domains
7
LotjaGi1g1v0061100_LC.11
– Gag polyprotein; TAIR: AT3G43590.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|O42395|CNBP_CHICK Cellular nucleic acid-binding protein; TrEMBL-Plants: tr|B0BLB4|B0BLB4_LOTJA CM0545.270.nc protein; Found in the gene: LotjaGi1g1v0061100_LC
Domains
9
LotjaGi1g1v0061100_LC.2
– Gag polyprotein; TAIR: AT3G43590.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|O76743|GLH4_CAEEL ATP-dependent RNA helicase glh-4; TrEMBL-Plants: tr|B0BLB3|B0BLB3_LOTJA CM0545.280.nc protein; Found in the gene: LotjaGi1g1v0061100_LC
Domains
13
LotjaGi1g1v0061100_LC.3
– Gag polyprotein; TAIR: AT3G43590.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|O42395|CNBP_CHICK Cellular nucleic acid-binding protein; TrEMBL-Plants: tr|B0BLB4|B0BLB4_LOTJA CM0545.270.nc protein; Found in the gene: LotjaGi1g1v0061100_LC
Domains
9
LotjaGi1g1v0061100_LC.5
– Gag polyprotein; TAIR: AT3G43590.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P24736|GAG_HV1U4 Gag polyprotein; TrEMBL-Plants: tr|B0BLB4|B0BLB4_LOTJA CM0545.270.nc protein; Found in the gene: LotjaGi1g1v0061100_LC
Domains
13
LotjaGi1g1v0061100_LC.6
– Gag polyprotein; TAIR: AT3G43590.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|O42395|CNBP_CHICK Cellular nucleic acid-binding protein; TrEMBL-Plants: tr|B0BLB3|B0BLB3_LOTJA CM0545.280.nc protein; Found in the gene: LotjaGi1g1v0061100_LC
Domains
9
LotjaGi1g1v0061100_LC.9
– Gag polyprotein; TAIR: AT3G43590.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|O42395|CNBP_CHICK Cellular nucleic acid-binding protein; TrEMBL-Plants: tr|V4UD96|V4UD96_9ROSI Uncharacterized protein; Found in the gene: LotjaGi1g1v0061100_LC
Domains
8
LotjaGi1g1v0069200.1
– Pol polyprotein; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|B8YLY7|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0069200
Domains
25
LotjaGi1g1v0104600_LC.1
– Transposon protein, putative, mutator sub-class; TAIR: AT3G05850.1 MuDR family transposase; Swiss-Prot: sp|Q9SWG3|FAR1_ARATH Protein FAR-RED IMPAIRED RESPONSE 1; TrEMBL-Plants: tr|A0A1B5Z7A3|A0A1B5Z7A3_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0104600_LC
Domains
14
LotjaGi1g1v0107200_LC.1
– Gag-pol polyprotein; TAIR: AT4G00980.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A1J3EPB7|A0A1J3EPB7_NOCCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0107200_LC
Domains
10
LotjaGi1g1v0148700_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|Q2HU05|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi1g1v0148700_LC
Domains
12
LotjaGi1g1v0163700.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151QNH5|A0A151QNH5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0163700
Domains
23
LotjaGi1g1v0182500.1
– Transposon protein, putative, Mutator sub-class; TAIR: AT1G06740.1 MuDR family transposase; Swiss-Prot: sp|Q9JKS6|PCLO_RAT Protein piccolo; TrEMBL-Plants: tr|A0A0B2SI26|A0A0B2SI26_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0182500
Domains
15
LotjaGi1g1v0189900_LC.1
– Gag-Pol polyprotein; TAIR: AT2G37340.1 arginine/serine-rich zinc knuckle-containing protein 33; Swiss-Prot: sp|P12450|GAG_HV2SB Gag polyprotein; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi1g1v0189900_LC
Domains
12
LotjaGi1g1v0204400_LC.1
– Gag-Pol polyprotein; TAIR: AT3G43490.1 Zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P03354|POL_RSVP Gag-Pro-Pol polyprotein; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi1g1v0204400_LC
Domains
17
LotjaGi1g1v0212500_LC.1
– Gag-Pol polyprotein; TAIR: AT3G42860.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q65XV7|RFA1C_ORYSJ Replication protein A 70 kDa DNA-binding subunit C; TrEMBL-Plants: tr|Q949L3|Q949L3_CICAR Putative polyprotein; Found in the gene: LotjaGi1g1v0212500_LC
Domains
10
LotjaGi1g1v0218400_LC.1
– Protein FAR1-RELATED SEQUENCE 5; TAIR: AT4G38180.1 FAR1-related sequence 5; Swiss-Prot: sp|Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5; TrEMBL-Plants: tr|A0A151SA71|A0A151SA71_CAJCA Protein FAR1-RELATED SEQUENCE 5; Found in the gene: LotjaGi1g1v0218400_LC
Domains
16
LotjaGi1g1v0218400_LC.2
– Protein FAR1-RELATED SEQUENCE 5; TAIR: AT4G38180.1 FAR1-related sequence 5; Swiss-Prot: sp|Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5; TrEMBL-Plants: tr|A0A151SA71|A0A151SA71_CAJCA Protein FAR1-RELATED SEQUENCE 5; Found in the gene: LotjaGi1g1v0218400_LC
Domains
16
LotjaGi1g1v0218400_LC.3
– Protein FAR1-RELATED SEQUENCE 5; TAIR: AT4G38180.1 FAR1-related sequence 5; Swiss-Prot: sp|Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5; TrEMBL-Plants: tr|A0A151SA71|A0A151SA71_CAJCA Protein FAR1-RELATED SEQUENCE 5; Found in the gene: LotjaGi1g1v0218400_LC
Domains
16
LotjaGi1g1v0222900_LC.1
– Gag-Pol polyprotein; TAIR: AT3G43590.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P05895|POL_SIVVT Gag-Pol polyprotein; TrEMBL-Plants: tr|Q949L4|Q949L4_CICAR Putative polyprotein; Found in the gene: LotjaGi1g1v0222900_LC
Domains
9
LotjaGi1g1v0226600.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G00980.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|Q2HU05|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi1g1v0226600
Domains
12
LotjaGi1g1v0226700_LC.1
– Gag-Pol polyprotein; TAIR: AT1G75560.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q65XV7|RFA1C_ORYSJ Replication protein A 70 kDa DNA-binding subunit C; TrEMBL-Plants: tr|Q949L4|Q949L4_CICAR Putative polyprotein; Found in the gene: LotjaGi1g1v0226700_LC
Domains
15
LotjaGi1g1v0233500_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT1G67020.1 transmembrane protein; Swiss-Prot: sp|P17757|POL_HV2D1 Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A061FHZ8|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi1g1v0233500_LC
Domains
12
LotjaGi1g1v0236900_LC.1
– Transposon TX1 uncharacterized; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|O74555|BBP_SCHPO Branchpoint-bridging protein; TrEMBL-Plants: tr|A0A0R0FG98|A0A0R0FG98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0236900_LC
Domains
8
LotjaGi1g1v0244200_LC.1
– Gag-Pol polyprotein; TAIR: AT4G36020.1 cold shock domain protein 1; Swiss-Prot: sp|Q8AII1|POL_SIVTN Gag-Pol polyprotein; TrEMBL-Plants: tr|Q949L4|Q949L4_CICAR Putative polyprotein; Found in the gene: LotjaGi1g1v0244200_LC
Domains
10
LotjaGi1g1v0262000_LC.1
– Gag-Pol polyprotein; TAIR: AT2G15180.1 Zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q7Z6E9|RBBP6_HUMAN E3 ubiquitin-protein ligase RBBP6; TrEMBL-Plants: tr|Q949L3|Q949L3_CICAR Putative polyprotein; Found in the gene: LotjaGi1g1v0262000_LC
Domains
8
LotjaGi1g1v0280700_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp|Q966L9|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr|A5BKR0|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0280700_LC
Domains
8
LotjaGi1g1v0281700_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A1B5Z8G7|A0A1B5Z8G7_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0281700_LC
Domains
45
LotjaGi1g1v0297200_LC.1
– Gag-Pol polyprotein; TAIR: AT3G42860.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P31821|GAG_FIVT2 Gag polyprotein; TrEMBL-Plants: tr|Q949L3|Q949L3_CICAR Putative polyprotein; Found in the gene: LotjaGi1g1v0297200_LC
Domains
10
LotjaGi1g1v0321800.1
– DNA topoisomerase; TAIR: AT5G63920.1 topoisomerase 3alpha; Swiss-Prot: sp|Q9LVP1|TOP3A_ARATH DNA topoisomerase 3-alpha; TrEMBL-Plants: tr|A0A0S3RFA9|A0A0S3RFA9_PHAAN DNA topoisomerase; Found in the gene: LotjaGi1g1v0321800
Domains
40
LotjaGi1g1v0384800_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G29785.1 Pol-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151SEB7|A0A151SEB7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0384800_LC
Domains
11
LotjaGi1g1v0388800_LC.1
– Gag-Pol polyprotein; TAIR: AT4G36020.1 cold shock domain protein 1; Swiss-Prot: sp|P53849|GIS2_YEAST Zinc finger protein GIS2; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi1g1v0388800_LC
Domains
17
LotjaGi1g1v0406600_LC.1
– Gag-pol polyprotein; TAIR: AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|Q8AII2|GAG_SIVTN Gag polyprotein; TrEMBL-Plants: tr|A0A151SZ39|A0A151SZ39_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0406600_LC
Domains
9
LotjaGi1g1v0411700_LC.2
– Transposon protein, putative, Mutator sub-class; TAIR: AT1G64260.1 MuDR family transposase; Swiss-Prot: sp|A7X2C3|EBHA_STAA1 Extracellular matrix-binding protein EbhA; TrEMBL-Plants: tr|A0A151SBM5|A0A151SBM5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0411700_LC
Domains
5
LotjaGi1g1v0411700_LC.5
– Transposon protein, putative, Mutator sub-class; TAIR: AT1G64260.1 MuDR family transposase; Swiss-Prot: sp|A7X2C3|EBHA_STAA1 Extracellular matrix-binding protein EbhA; TrEMBL-Plants: tr|A0A151SBM5|A0A151SBM5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0411700_LC
Domains
5
LotjaGi1g1v0411700_LC.7
– Transposon protein, putative, Mutator sub-class; TAIR: AT1G64260.1 MuDR family transposase; Swiss-Prot: sp|P03354|POL_RSVP Gag-Pro-Pol polyprotein; TrEMBL-Plants: tr|A0A151SBM5|A0A151SBM5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0411700_LC
Domains
9
LotjaGi1g1v0437100_LC.1
– Cytochrome C oxidase subunit; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|Q9Y6C2|EMIL1_HUMAN EMILIN-1; TrEMBL-Plants: tr|A0A151QZE4|A0A151QZE4_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi1g1v0437100_LC
Domains
3
LotjaGi1g1v0443900.1
– Protein FAR1-RELATED SEQUENCE 3; TAIR: AT4G38180.1 FAR1-related sequence 5; Swiss-Prot: sp|Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5; TrEMBL-Plants: tr|K7MC87|K7MC87_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0443900
Domains
15
LotjaGi1g1v0471500_LC.1
– Gag-Pol polyprotein; TAIR: AT1G06740.1 MuDR family transposase; Swiss-Prot: sp|P17757|POL_HV2D1 Gag-Pol polyprotein; TrEMBL-Plants: tr|A2Q3N2|A2Q3N2_MEDTR Zinc finger, CCHC-type; Found in the gene: LotjaGi1g1v0471500_LC
Domains
3
LotjaGi1g1v0503100_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A5BKR0|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0503100_LC
Domains
8
LotjaGi1g1v0512600.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|A8FL10|DNLJ_CAMJ8 DNA ligase; TrEMBL-Plants: tr|A0A151TMA1|A0A151TMA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0512600
Domains
11
LotjaGi1g1v0532800_LC.1
– Gag-Pol polyprotein; TAIR: AT2G15180.1 Zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P03354|POL_RSVP Gag-Pro-Pol polyprotein; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi1g1v0532800_LC
Domains
19
LotjaGi1g1v0563600.1
– Gag polyprotein; TAIR: AT1G75560.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP; TrEMBL-Plants: tr|K7KSE0|K7KSE0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0563600
Domains
11
LotjaGi1g1v0563600.2
– Gag polyprotein; TAIR: AT1G75560.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP; TrEMBL-Plants: tr|K7KSE0|K7KSE0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0563600
Domains
11
LotjaGi1g1v0563600.3
– Gag polyprotein; TAIR: AT1G75560.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP; TrEMBL-Plants: tr|K7KSE0|K7KSE0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0563600
Domains
11
LotjaGi1g1v0569100_LC.1
– Transposon protein, putative, Mutator sub-class; TAIR: AT3G05850.1 MuDR family transposase; Swiss-Prot: sp|D4DGR1|Y6366_TRIVH Probable aspartic-type endopeptidase TRV_06366; TrEMBL-Plants: tr|A0A151SA94|A0A151SA94_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0569100_LC
Domains
13
LotjaGi1g1v0688500.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151QUV8|A0A151QUV8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0688500
Domains
24
LotjaGi1g1v0695900.1
– Arginine/serine-rich splicing factor, putative; TAIR: AT3G53500.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|Q9FYB7|RSZ32_ARATH Serine/arginine-rich splicing factor RS2Z32; TrEMBL-Plants: tr|I3S601|I3S601_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0695900
Domains
17
LotjaGi1g1v0695900.2
– Arginine/serine-rich splicing factor, putative; TAIR: AT3G53500.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|Q9FYB7|RSZ32_ARATH Serine/arginine-rich splicing factor RS2Z32; TrEMBL-Plants: tr|I3S601|I3S601_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0695900
Domains
20
LotjaGi1g1v0695900.3
– Arginine/serine-rich splicing factor, putative; TAIR: AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|Q9FYB7|RSZ32_ARATH Serine/arginine-rich splicing factor RS2Z32; TrEMBL-Plants: tr|I3S601|I3S601_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0695900
Domains
18
LotjaGi1g1v0695900.4
– Arginine/serine-rich splicing factor, putative; TAIR: AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|Q9FYB7|RSZ32_ARATH Serine/arginine-rich splicing factor RS2Z32; TrEMBL-Plants: tr|I3S601|I3S601_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0695900
Domains
18
LotjaGi1g1v0695900.5
– Arginine/serine-rich splicing factor, putative; TAIR: AT3G53500.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|Q9FYB7|RSZ32_ARATH Serine/arginine-rich splicing factor RS2Z32; TrEMBL-Plants: tr|I3S601|I3S601_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0695900
Domains
17
LotjaGi1g1v0695900.6
– Arginine/serine-rich splicing factor, putative; TAIR: AT3G53500.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|Q9FYB7|RSZ32_ARATH Serine/arginine-rich splicing factor RS2Z32; TrEMBL-Plants: tr|I1JPG6|I1JPG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0695900
Domains
12
LotjaGi1g1v0695900.7
– Arginine/serine-rich splicing factor, putative; TAIR: AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|Q9FYB7|RSZ32_ARATH Serine/arginine-rich splicing factor RS2Z32; TrEMBL-Plants: tr|I1NA32|I1NA32_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0695900
Domains
18
LotjaGi1g1v0695900.8
– Arginine/serine-rich splicing factor, putative; TAIR: AT3G53500.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|Q9FYB7|RSZ32_ARATH Serine/arginine-rich splicing factor RS2Z32; TrEMBL-Plants: tr|I1JPG6|I1JPG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0695900
Domains
12
LotjaGi1g1v0757800.1
– Zinc knuckle family protein; TAIR: AT3G62330.1 Zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q6NW34|NEPRO_HUMAN Nucleolus and neural progenitor protein; TrEMBL-Plants: tr|I1JQT9|I1JQT9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0757800
Domains
8
LotjaGi1g1v0757800.2
– Zinc knuckle family protein; TAIR: AT3G62330.1 Zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q6NW34|NEPRO_HUMAN Nucleolus and neural progenitor protein; TrEMBL-Plants: tr|I1JQT9|I1JQT9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0757800
Domains
8
LotjaGi1g1v0757800.4
– Zinc knuckle family protein; TAIR: AT3G62330.1 Zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q5U3F2|SLU7_DANRE Pre-mRNA-splicing factor SLU7; TrEMBL-Plants: tr|K7KGE8|K7KGE8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0757800
Domains
8
LotjaGi1g1v0757800.5
– Zinc knuckle family protein; TAIR: AT3G62330.1 Zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q6NW34|NEPRO_HUMAN Nucleolus and neural progenitor protein; TrEMBL-Plants: tr|I1JQT9|I1JQT9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0757800
Domains
8
LotjaGi1g1v0778800.1
– 5'-3' exoribonuclease; TAIR: AT1G54490.1 exoribonuclease 4; Swiss-Prot: sp|Q9FQ04|XRN4_ARATH 5'-3' exoribonuclease 4; TrEMBL-Plants: tr|I1JRL0|I1JRL0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0778800
Domains
19
LotjaGi1g1v0778800.2
– 5'-3' exoribonuclease; TAIR: AT1G54490.1 exoribonuclease 4; Swiss-Prot: sp|Q9FQ04|XRN4_ARATH 5'-3' exoribonuclease 4; TrEMBL-Plants: tr|A0A151TXT7|A0A151TXT7_CAJCA 5'-3' exoribonuclease 4; Found in the gene: LotjaGi1g1v0778800
Domains
20
LotjaGi1g1v0778800.3
– 5'-3' exoribonuclease; TAIR: AT1G54490.1 exoribonuclease 4; Swiss-Prot: sp|Q9FQ04|XRN4_ARATH 5'-3' exoribonuclease 4; TrEMBL-Plants: tr|A0A151TXT7|A0A151TXT7_CAJCA 5'-3' exoribonuclease 4; Found in the gene: LotjaGi1g1v0778800
Domains
16
LotjaGi1g1v0793500.1
– RNA polymerase II transcriptional coactivator KELP; TAIR: AT4G00980.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|O65155|KELP_ARATH RNA polymerase II transcriptional coactivator KELP; TrEMBL-Plants: tr|A0A151TXZ1|A0A151TXZ1_CAJCA RNA polymerase II transcriptional coactivator KELP; Found in the gene: LotjaGi1g1v0793500
Domains
13
LotjaGi2g1v0004100_LC.1
– Transposon protein, putative, Mutator sub-class; TAIR: AT1G67230.1 little nuclei1; Swiss-Prot: sp|P27973|POL_SIVV1 Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151SBM5|A0A151SBM5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0004100_LC
Domains
5
LotjaGi2g1v0013600_LC.1
– Gag-Pol polyprotein; TAIR: AT4G36020.1 cold shock domain protein 1; Swiss-Prot: sp|P53849|GIS2_YEAST Zinc finger protein GIS2; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi2g1v0013600_LC
Domains
21
LotjaGi2g1v0017500_LC.2
– Gag polyprotein; TAIR: AT5G36228.1 nucleic acid binding / zinc ion binding protein; Swiss-Prot: sp|O04244|Y4200_ARATH Uncharacterized protein At4g02000; TrEMBL-Plants: tr|A0A061ELV8|A0A061ELV8_THECC Uncharacterized protein; Found in the gene: LotjaGi2g1v0017500_LC
Domains
9
LotjaGi2g1v0020100_LC.1
– Gag-Pol polyprotein; TAIR: AT3G42860.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P53849|GIS2_YEAST Zinc finger protein GIS2; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi2g1v0020100_LC
Domains
16
LotjaGi2g1v0022600_LC.1
– Gag polyprotein; TAIR: AT3G42860.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP; TrEMBL-Plants: tr|A0A164T1U9|A0A164T1U9_DAUCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0022600_LC
Domains
11
LotjaGi2g1v0056900.1
– Zinc finger CCHC domain-containing protein 8; TAIR: AT5G38600.1 Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q6DD45|ZCHC8_XENLA Zinc finger CCHC domain-containing protein 8; TrEMBL-Plants: tr|K7LXS2|K7LXS2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0056900
Domains
8
LotjaGi2g1v0061400_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|P34689|GLH1_CAEEL ATP-dependent RNA helicase glh-1; TrEMBL-Plants: tr|A0A151RFK8|A0A151RFK8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0061400_LC
Domains
8
LotjaGi2g1v0075100_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RCN0|A0A151RCN0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0075100_LC
Domains
13
LotjaGi2g1v0090500_LC.1
– Gag-Pol polyprotein; TAIR: AT3G43590.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P05895|POL_SIVVT Gag-Pol polyprotein; TrEMBL-Plants: tr|Q949L3|Q949L3_CICAR Putative polyprotein; Found in the gene: LotjaGi2g1v0090500_LC
Domains
12
LotjaGi2g1v0096700_LC.1
– Gag-pol polyprotein; TAIR: AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A0B2PNS0|A0A0B2PNS0_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0096700_LC
Domains
10
LotjaGi2g1v0106400_LC.1
– Gag-Pol polyprotein; TAIR: AT4G36020.1 cold shock domain protein 1; Swiss-Prot: sp|P53849|GIS2_YEAST Zinc finger protein GIS2; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi2g1v0106400_LC
Domains
17
LotjaGi2g1v0106400_LC.2
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi2g1v0106400_LC
Domains
32
LotjaGi2g1v0106400_LC.3
– Gag-Pol polyprotein; TAIR: AT4G36020.1 cold shock domain protein 1; Swiss-Prot: sp|P53849|GIS2_YEAST Zinc finger protein GIS2; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi2g1v0106400_LC
Domains
17
LotjaGi2g1v0110300_LC.1
– Gag-Pol polyprotein; TAIR: AT4G36020.2 cold shock domain protein 1; Swiss-Prot: sp|P05895|POL_SIVVT Gag-Pol polyprotein; TrEMBL-Plants: tr|Q949L4|Q949L4_CICAR Putative polyprotein; Found in the gene: LotjaGi2g1v0110300_LC
Domains
13
LotjaGi2g1v0112600_LC.1
– Gag-Pol polyprotein; TAIR: AT3G43590.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P53996|CNBP_MOUSE Cellular nucleic acid-binding protein; TrEMBL-Plants: tr|A0A1B5Z7X4|A0A1B5Z7X4_TRISU Uncharacterized protein; Found in the gene: LotjaGi2g1v0112600_LC
Domains
12
LotjaGi2g1v0114600_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|O92815|POL_WDSV Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A0R0HQP8|A0A0R0HQP8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0114600_LC
Domains
9
LotjaGi2g1v0116300_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0116300_LC
Domains
43
LotjaGi2g1v0152300_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RQY5|A0A151RQY5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0152300_LC
Domains
8
LotjaGi2g1v0202500_LC.1
– Zinc knuckle (CCHC-type) family protein; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|Q4P0H7|BBP_USTMA Branchpoint-bridging protein; TrEMBL-Plants: tr|A0A151R022|A0A151R022_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi2g1v0202500_LC
Domains
6
LotjaGi2g1v0219900_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G06740.1 MuDR family transposase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RTE7|A0A151RTE7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0219900_LC
Domains
7
LotjaGi2g1v0264700_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151QVU7|A0A151QVU7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0264700_LC
Domains
7
LotjaGi2g1v0276800_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G00980.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|V4T614|V4T614_9ROSI Uncharacterized protein; Found in the gene: LotjaGi2g1v0276800_LC
Domains
10
LotjaGi2g1v0312200.1
– MYB-like transcription factor family protein; TAIR: AT1G70000.1 myb-like transcription factor family protein; Swiss-Prot: sp|Q2V9B0|MY1R1_SOLTU Transcription factor MYB1R1; TrEMBL-Plants: tr|A0A0S3T2U3|A0A0S3T2U3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0312200
Domains
16
LotjaGi2g1v0319500_LC.1
– Transposon TX1 uncharacterized; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|O04244|Y4200_ARATH Uncharacterized protein At4g02000; TrEMBL-Plants: tr|Q1SKZ9|Q1SKZ9_MEDTR Zinc finger, CCHC-type; Found in the gene: LotjaGi2g1v0319500_LC
Domains
7
LotjaGi2g1v0343000.1
– Replication protein A 70 kDa DNA-binding subunit; TAIR: AT5G45400.1 Replication factor-A protein 1-like protein; Swiss-Prot: sp|Q9FHJ6|RFA1C_ARATH Replication protein A 70 kDa DNA-binding subunit C; TrEMBL-Plants: tr|K7LF83|K7LF83_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0343000
Domains
27
LotjaGi2g1v0343000.2
– Replication protein A 70 kDa DNA-binding subunit; TAIR: AT5G45400.1 Replication factor-A protein 1-like protein; Swiss-Prot: sp|Q9FHJ6|RFA1C_ARATH Replication protein A 70 kDa DNA-binding subunit C; TrEMBL-Plants: tr|K7LF83|K7LF83_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0343000
Domains
24
LotjaGi2g1v0393200_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp|P34689|GLH1_CAEEL ATP-dependent RNA helicase glh-1; TrEMBL-Plants: tr|A5BKR0|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0393200_LC
Domains
10
LotjaGi2g1v0398600.1
– ATP-dependent RNA helicase; TAIR: AT5G51280.1 DEAD-box protein abstrakt; Swiss-Prot: sp|Q9LU46|RH35_ARATH DEAD-box ATP-dependent RNA helicase 35; TrEMBL-Plants: tr|A0A151TW33|A0A151TW33_CAJCA DEAD-box ATP-dependent RNA helicase 35; Found in the gene: LotjaGi2g1v0398600
Domains
25
LotjaGi2g1v0398600.2
– ATP-dependent RNA helicase; TAIR: AT5G51280.1 DEAD-box protein abstrakt; Swiss-Prot: sp|Q9LU46|RH35_ARATH DEAD-box ATP-dependent RNA helicase 35; TrEMBL-Plants: tr|A0A151TW33|A0A151TW33_CAJCA DEAD-box ATP-dependent RNA helicase 35; Found in the gene: LotjaGi2g1v0398600
Domains
25
LotjaGi2g1v0398600.3
– ATP-dependent RNA helicase; TAIR: AT5G51280.1 DEAD-box protein abstrakt; Swiss-Prot: sp|Q9LU46|RH35_ARATH DEAD-box ATP-dependent RNA helicase 35; TrEMBL-Plants: tr|A0A151TW33|A0A151TW33_CAJCA DEAD-box ATP-dependent RNA helicase 35; Found in the gene: LotjaGi2g1v0398600
Domains
25
LotjaGi3g1v0067100.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RJ01|A0A151RJ01_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0067100
Domains
23
LotjaGi3g1v0093100_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G54490.1 exoribonuclease 4; Swiss-Prot: sp|P34689|GLH1_CAEEL ATP-dependent RNA helicase glh-1; TrEMBL-Plants: tr|Q2HU05|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi3g1v0093100_LC
Domains
9
LotjaGi3g1v0149800.1
– Zinc knuckle (CCHC-type) family protein; TAIR: AT5G20220.4 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP; TrEMBL-Plants: tr|A0A072TQL6|A0A072TQL6_MEDTR Zinc knuckle (CCHC-type) family protein; Found in the gene: LotjaGi3g1v0149800
Domains
10
LotjaGi3g1v0211900_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A5BKR0|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0211900_LC
Domains
11
LotjaGi3g1v0217900_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp|Q966L9|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr|A5BKR0|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0217900_LC
Domains
8
LotjaGi3g1v0258300_LC.1
– Gag-Pol polyprotein; TAIR: AT3G42860.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P53849|GIS2_YEAST Zinc finger protein GIS2; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi3g1v0258300_LC
Domains
17
LotjaGi3g1v0264400.1
– Gag-Pol polyprotein; TAIR: AT3G42860.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q1A249|POL_SIVEK Gag-Pol polyprotein; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi3g1v0264400
Domains
12
LotjaGi3g1v0297700_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G00980.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|Q2HU05|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi3g1v0297700_LC
Domains
12
LotjaGi3g1v0299600.1
– Peptidyl-prolyl cis-trans isomerase-like protein; TAIR: AT1G53720.1 cyclophilin 59; Swiss-Prot: sp|Q6Q151|CYP59_ARATH Peptidyl-prolyl cis-trans isomerase CYP59; TrEMBL-Plants: tr|A0A072U025|A0A072U025_MEDTR Peptidyl-prolyl cis-trans isomerase-like protein; Found in the gene: LotjaGi3g1v0299600
Domains
28
LotjaGi3g1v0306700_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0306700_LC
Domains
32
LotjaGi3g1v0306900_LC.1
– Gag-Pol polyprotein; TAIR: AT3G43490.1 Zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P03354|POL_RSVP Gag-Pro-Pol polyprotein; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi3g1v0306900_LC
Domains
12
LotjaGi3g1v0307200_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0307200_LC
Domains
43
LotjaGi3g1v0307200_LC.2
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0307200_LC
Domains
43
LotjaGi3g1v0307200_LC.3
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0307200_LC
Domains
43
LotjaGi3g1v0307200_LC.4
– Gag-Pol polyprotein; TAIR: AT1G75560.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|O91080|POL_HV1YF Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151RID1|A0A151RID1_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0307200_LC
Domains
13
LotjaGi3g1v0313300_LC.1
– Gag-Pol polyprotein; TAIR: AT1G75560.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q65XV7|RFA1C_ORYSJ Replication protein A 70 kDa DNA-binding subunit C; TrEMBL-Plants: tr|A0A151RHT9|A0A151RHT9_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi3g1v0313300_LC
Domains
10
LotjaGi3g1v0357400.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|A8FL10|DNLJ_CAMJ8 DNA ligase; TrEMBL-Plants: tr|A0A151TMA1|A0A151TMA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0357400
Domains
11
LotjaGi3g1v0434200_LC.1
– Transposon TX1 uncharacterized; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|O04244|Y4200_ARATH Uncharacterized protein At4g02000; TrEMBL-Plants: tr|A0A0R0FG98|A0A0R0FG98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0434200_LC
Domains
8
LotjaGi3g1v0471000_LC.1
– Gag-Pol polyprotein; TAIR: AT1G06740.1 MuDR family transposase; Swiss-Prot: sp|Q08DL1|ZCH12_BOVIN Zinc finger CCHC domain-containing protein 12; TrEMBL-Plants: tr|A0A151SBM5|A0A151SBM5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0471000_LC
Domains
5
LotjaGi3g1v0515000.1
– RING/U-box superfamily protein; TAIR: AT1G65430.1 IBR domain-containing protein; Swiss-Prot: sp|Q84RR0|ARI7_ARATH Probable E3 ubiquitin-protein ligase ARI7; TrEMBL-Plants: tr|I1LPJ5|I1LPJ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0515000
Domains
13
LotjaGi3g1v0517000_LC.1
– Gag-pol polyprotein; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q75001|GAG_HV1ET Gag polyprotein; TrEMBL-Plants: tr|A0A151R7L7|A0A151R7L7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0517000_LC
Domains
11
LotjaGi3g1v0522700.1
– Cold shock protein; TAIR: AT2G21060.1 glycine-rich protein 2B; Swiss-Prot: sp|Q38896|CSP4_ARATH Cold shock domain-containing protein 4; TrEMBL-Plants: tr|A0A088FZS5|A0A088FZS5_CICAR Cold shock protein; Found in the gene: LotjaGi3g1v0522700
Domains
20
LotjaGi3g1v0529800.1
– Gag polyprotein; TAIR: AT3G02820.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q6DBR4|TIPIN_DANRE TIMELESS-interacting protein; TrEMBL-Plants: tr|A0A0L9V851|A0A0L9V851_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0529800
Domains
13
LotjaGi3g1v0552600.1
– RNA-binding protein 3; TAIR: AT5G51300.1 splicing factor-like protein; Swiss-Prot: sp|P0CO45|BBP_CRYNB Branchpoint-bridging protein; TrEMBL-Plants: tr|I1L5P7|I1L5P7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0552600
Domains
30
LotjaGi3g1v0557100_LC.3
– Transposon TX1 uncharacterized; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|P38281|APD1_YEAST Actin patches distal protein 1; TrEMBL-Plants: tr|A0A1J7HRY2|A0A1J7HRY2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0557100_LC
Domains
6
LotjaGi4g1v0031100_LC.1
– Ta11-like non-LTR retrotransposon; TAIR: AT3G42140.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|A8TX70|CO6A5_HUMAN Collagen alpha-5(VI) chain; TrEMBL-Plants: tr|S8DGP6|S8DGP6_9LAMI Uncharacterized protein; Found in the gene: LotjaGi4g1v0031100_LC
Domains
5
LotjaGi4g1v0031800.1
– RNA-binding protein; TAIR: AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|Q9LIN3|RZ1A_ARATH Glycine-rich RNA-binding protein RZ1A; TrEMBL-Plants: tr|I3SUE0|I3SUE0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0031800
Domains
18
LotjaGi4g1v0031800.2
– RNA-binding protein; TAIR: AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|Q9LIN3|RZ1A_ARATH Glycine-rich RNA-binding protein RZ1A; TrEMBL-Plants: tr|I3SUE0|I3SUE0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0031800
Domains
18
LotjaGi4g1v0033100_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A151TMA1|A0A151TMA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0033100_LC
Domains
11
LotjaGi4g1v0079400_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A5BKR0|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0079400_LC
Domains
8
LotjaGi4g1v0104200_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A0D3CYK1|A0A0D3CYK1_BRAOL Uncharacterized protein; Found in the gene: LotjaGi4g1v0104200_LC
Domains
11
LotjaGi4g1v0105300_LC.1
– Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT3G10400.1 RNA recognition motif and CCHC-type zinc finger domains containing protein; Swiss-Prot: sp|P34689|GLH1_CAEEL ATP-dependent RNA helicase glh-1; TrEMBL-Plants: tr|A0A1B5Z9J1|A0A1B5Z9J1_TRISU Uncharacterized protein; Found in the gene: LotjaGi4g1v0105300_LC
Domains
12
LotjaGi4g1v0112300.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q4J8F0|ARLY_SULAC Argininosuccinate lyase; TrEMBL-Plants: tr|A0A151SEJ5|A0A151SEJ5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0112300
Domains
7
LotjaGi4g1v0124100_LC.1
– Gag polyprotein; TAIR: AT3G55340.1 phragmoplastin interacting protein 1; Swiss-Prot: sp|P12502|POL_SIVS4 Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A061FHZ8|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi4g1v0124100_LC
Domains
12
LotjaGi4g1v0128600.1
– Cold shock protein, putative; TAIR: AT4G36020.1 cold shock domain protein 1; Swiss-Prot: sp|O65639|CSP1_ARATH Cold shock protein 1; TrEMBL-Plants: tr|A0A0S3R460|A0A0S3R460_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0128600
Domains
22
LotjaGi4g1v0135600_LC.1
– Transposon protein, putative, mutator sub-class; TAIR: AT4G36020.2 cold shock domain protein 1; Swiss-Prot: sp|P36627|BYR3_SCHPO Cellular nucleic acid-binding protein homolog; TrEMBL-Plants: tr|A0A1B5Z7A3|A0A1B5Z7A3_TRISU Uncharacterized protein; Found in the gene: LotjaGi4g1v0135600_LC
Domains
6
LotjaGi4g1v0145000_LC.1
– Gag-Pol polyprotein; TAIR: AT3G43590.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|O76743|GLH4_CAEEL ATP-dependent RNA helicase glh-4; TrEMBL-Plants: tr|A0A1B5Z7X4|A0A1B5Z7X4_TRISU Uncharacterized protein; Found in the gene: LotjaGi4g1v0145000_LC
Domains
12
LotjaGi4g1v0146000_LC.1
– Transposon protein, putative, Mutator sub-class; TAIR: AT1G06740.1 MuDR family transposase; Swiss-Prot: sp|Q08DL1|ZCH12_BOVIN Zinc finger CCHC domain-containing protein 12; TrEMBL-Plants: tr|A0A151SBM5|A0A151SBM5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0146000_LC
Domains
5
LotjaGi4g1v0156300_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT3G43590.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A061FQP6|A0A061FQP6_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi4g1v0156300_LC
Domains
12
LotjaGi4g1v0164400.1
– Arginine/serine-rich splicing factor, putative; TAIR: AT1G23860.1 RS-containing zinc finger protein 21; Swiss-Prot: sp|Q69KL9|RZ21A_ORYSJ Serine/arginine-rich splicing factor RSZ21A; TrEMBL-Plants: tr|I3SKI2|I3SKI2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0164400
Domains
19
LotjaGi4g1v0164400.2
– Arginine/serine-rich splicing factor, putative; TAIR: AT4G31580.1 serine/arginine-rich 22; Swiss-Prot: sp|Q6K4N0|RSZ21_ORYSJ Serine/arginine-rich splicing factor RSZ21; TrEMBL-Plants: tr|I3SKI2|I3SKI2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0164400
Domains
19
LotjaGi4g1v0175400_LC.1
– Gag-Pol polyprotein; TAIR: AT2G37340.2 arginine/serine-rich zinc knuckle-containing protein 33; Swiss-Prot: sp|Q76634|POL_HV2UC Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151QZ41|A0A151QZ41_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0175400_LC
Domains
8
LotjaGi4g1v0177800.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G60650.3 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|P34689|GLH1_CAEEL ATP-dependent RNA helicase glh-1; TrEMBL-Plants: tr|Q2HU05|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi4g1v0177800
Domains
11
LotjaGi4g1v0186500_LC.1
– Gag-Pol polyprotein; TAIR: AT3G42860.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q02836|POL_SIVG1 Gag-Pol polyprotein; TrEMBL-Plants: tr|Q949L4|Q949L4_CICAR Putative polyprotein; Found in the gene: LotjaGi4g1v0186500_LC
Domains
9
LotjaGi4g1v0190200_LC.1
– Zinc finger, CCHC-type-like protein; TAIR: AT5G36228.1 nucleic acid binding / zinc ion binding protein; Swiss-Prot: sp|O04244|Y4200_ARATH Uncharacterized protein At4g02000; TrEMBL-Plants: tr|B9SLI2|B9SLI2_RICCO Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0190200_LC
Domains
10
LotjaGi4g1v0204500.1
– Dead-box atp-dependent rna helicase 41; TAIR: AT3G02065.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9DBN9|DDX59_MOUSE Probable ATP-dependent RNA helicase DDX59; TrEMBL-Plants: tr|K7KN36|K7KN36_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0204500
Domains
9
LotjaGi4g1v0204500.2
– Dead-box atp-dependent rna helicase 41; TAIR: AT3G02065.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9DBN9|DDX59_MOUSE Probable ATP-dependent RNA helicase DDX59; TrEMBL-Plants: tr|A0A0B2P9K2|A0A0B2P9K2_GLYSO Putative ATP-dependent RNA helicase DDX59; Found in the gene: LotjaGi4g1v0204500
Domains
9
LotjaGi4g1v0207700_LC.1
– Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT4G13320.1 hypothetical protein; Swiss-Prot: sp|Q02836|POL_SIVG1 Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151R7Z9|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi4g1v0207700_LC
Domains
15
LotjaGi4g1v0212900_LC.1
– Gag-Pol polyprotein; TAIR: AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|P03354|POL_RSVP Gag-Pro-Pol polyprotein; TrEMBL-Plants: tr|A0A151S5E5|A0A151S5E5_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi4g1v0212900_LC
Domains
10
LotjaGi4g1v0216000_LC.1
– Gag-Pol polyprotein; TAIR: AT3G42860.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q8AII1|POL_SIVTN Gag-Pol polyprotein; TrEMBL-Plants: tr|Q949L4|Q949L4_CICAR Putative polyprotein; Found in the gene: LotjaGi4g1v0216000_LC
Domains
8
LotjaGi4g1v0257600.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|A7ZUN0|ACEK_ECO24 Isocitrate dehydrogenase kinase/phosphatase; TrEMBL-Plants: tr|A0A151TMA1|A0A151TMA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0257600
Domains
9
LotjaGi4g1v0291900_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|B8YLY7|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0291900_LC
Domains
13
LotjaGi4g1v0312300_LC.1
– Zinc finger protein; TAIR: AT5G36225.1 zinc knuckle protein; Swiss-Prot: sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP; TrEMBL-Plants: tr|A0A0B2PNF8|A0A0B2PNF8_GLYSO Uncharacterized protein; Found in the gene: LotjaGi4g1v0312300_LC
Domains
8
LotjaGi4g1v0401600_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT2G07760.1 Zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q09813|T111_SCHPO Putative transcription initiation factor TFIID 111 kDa subunit; TrEMBL-Plants: tr|A0A151TMA1|A0A151TMA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0401600_LC
Domains
7
LotjaGi4g1v0441000.1
– MYB-like transcription factor family protein; TAIR: AT5G56840.1 myb-like transcription factor family protein; Swiss-Prot: sp|Q9FKF9|M5162_ARATH Probable transcription factor At5g61620; TrEMBL-Plants: tr|I3T2H3|I3T2H3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0441000
Domains
16
LotjaGi5g1v0007100.1
– 5'-3' exoribonuclease 3; TAIR: AT1G75660.1 5'-3' exoribonuclease 3; Swiss-Prot: sp|Q9FQ03|XRN3_ARATH 5'-3' exoribonuclease 3; TrEMBL-Plants: tr|I1MY22|I1MY22_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0007100
Domains
20
LotjaGi5g1v0007100.2
– 5'-3' exoribonuclease 3; TAIR: AT1G75660.1 5'-3' exoribonuclease 3; Swiss-Prot: sp|Q9FQ03|XRN3_ARATH 5'-3' exoribonuclease 3; TrEMBL-Plants: tr|A0A0B2PTI7|A0A0B2PTI7_GLYSO 5'-3' exoribonuclease 3; Found in the gene: LotjaGi5g1v0007100
Domains
20
LotjaGi5g1v0067000.1
– Arginine/serine-rich splicing factor, putative; TAIR: AT4G31580.1 serine/arginine-rich 22; Swiss-Prot: sp|O81126|RSZ22_ARATH Serine/arginine-rich splicing factor RSZ22; TrEMBL-Plants: tr|I1M9U2|I1M9U2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0067000
Domains
19
LotjaGi5g1v0074300_LC.1
– Gag-Pol polyprotein; TAIR: AT5G49930.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P27980|POL_SIVVG Gag-Pol polyprotein; TrEMBL-Plants: tr|G7J1A4|G7J1A4_MEDTR Uncharacterized protein; Found in the gene: LotjaGi5g1v0074300_LC
Domains
5
LotjaGi5g1v0083200_LC.1
– Transposon protein, putative, mutator sub-class; TAIR: AT1G06740.1 MuDR family transposase; Swiss-Prot: sp|Q9S793|FRS8_ARATH Protein FAR1-RELATED SEQUENCE 8; TrEMBL-Plants: tr|A0A0B2SI26|A0A0B2SI26_GLYSO Uncharacterized protein; Found in the gene: LotjaGi5g1v0083200_LC
Domains
18
LotjaGi5g1v0100800_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G05360.1 Zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|Q84VH6|Q84VH6_SOYBN Gag-pol polyprotein; Found in the gene: LotjaGi5g1v0100800_LC
Domains
17
LotjaGi5g1v0101600.1
– Splicing factor, arginine/serine-rich, putative; TAIR: AT2G37340.1 arginine/serine-rich zinc knuckle-containing protein 33; Swiss-Prot: sp|Q23121|RSP1_CAEEL Probable splicing factor, arginine/serine-rich 1; TrEMBL-Plants: tr|K7K9P1|K7K9P1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0101600
Domains
18
LotjaGi5g1v0113200_LC.1
– Ta11-like non-LTR retrotransposon; TAIR: AT3G31430.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|O04244|Y4200_ARATH Uncharacterized protein At4g02000; TrEMBL-Plants: tr|M5W5K8|M5W5K8_PRUPE Uncharacterized protein; Found in the gene: LotjaGi5g1v0113200_LC
Domains
10
LotjaGi5g1v0114200_LC.1
– Gag-Pol polyprotein; TAIR: AT3G42860.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP; TrEMBL-Plants: tr|A0A1B5Z7X4|A0A1B5Z7X4_TRISU Uncharacterized protein; Found in the gene: LotjaGi5g1v0114200_LC
Domains
15
LotjaGi5g1v0124300_LC.1
– Gag-Pol polyprotein; TAIR: AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|P05895|POL_SIVVT Gag-Pol polyprotein; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi5g1v0124300_LC
Domains
12
LotjaGi5g1v0125400.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT2G06904.1 nucleic acid / zinc ion binding protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|Q2HU05|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi5g1v0125400
Domains
12
LotjaGi5g1v0127200_LC.1
– Gag-Pol polyprotein; TAIR: AT4G36020.1 cold shock domain protein 1; Swiss-Prot: sp|P31821|GAG_FIVT2 Gag polyprotein; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi5g1v0127200_LC
Domains
13
LotjaGi5g1v0160000.1
– Cold shock protein; TAIR: AT2G21060.1 glycine-rich protein 2B; Swiss-Prot: sp|P27484|GRP2_NICSY Glycine-rich protein 2; TrEMBL-Plants: tr|F6I111|F6I111_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0160000
Domains
21
LotjaGi5g1v0171300.5
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A5AVD6|A5AVD6_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0171300
Domains
11
LotjaGi5g1v0171300.6
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A061EH95|A0A061EH95_THECC Uncharacterized protein; Found in the gene: LotjaGi5g1v0171300
Domains
11
LotjaGi5g1v0214900.1
– 5'-3' exoribonuclease; TAIR: AT1G54490.2 exoribonuclease 4; Swiss-Prot: sp|Q9FQ04|XRN4_ARATH 5'-3' exoribonuclease 4; TrEMBL-Plants: tr|I1NIU3|I1NIU3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0214900
Domains
19
LotjaGi5g1v0214900.2
– 5'-3' exoribonuclease; TAIR: AT1G54490.1 exoribonuclease 4; Swiss-Prot: sp|Q9FQ04|XRN4_ARATH 5'-3' exoribonuclease 4; TrEMBL-Plants: tr|I1NIU3|I1NIU3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0214900
Domains
20
LotjaGi5g1v0235500.1
– ATP-dependent RNA helicase; TAIR: AT5G26742.1 DEAD box RNA helicase (RH3); Swiss-Prot: sp|Q8L7S8|RH3_ARATH DEAD-box ATP-dependent RNA helicase 3, chloroplastic; TrEMBL-Plants: tr|V7BHS0|V7BHS0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0235500
Domains
30
LotjaGi5g1v0265600_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00300.1 Gag-Pol-related retrotransposon family protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151UBW1|A0A151UBW1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0265600_LC
Domains
20
LotjaGi5g1v0300300.1
– Gag polyprotein; TAIR: AT5G52380.1 VASCULAR-RELATED NAC-DOMAIN 6; Swiss-Prot: sp|Q9HFF2|YL92_SCHPO Uncharacterized protein C683.02c; TrEMBL-Plants: tr|K7N3Q9|K7N3Q9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0300300
Domains
11
LotjaGi5g1v0321200_LC.1
– Gag-pol polyprotein; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|O12158|POL_HV192 Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151SZ39|A0A151SZ39_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0321200_LC
Domains
10
LotjaGi5g1v0334300_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G48720.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TMN9|A0A151TMN9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0334300_LC
Domains
14
LotjaGi5g1v0341900.1
– RNA-binding protein; TAIR: AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|O22703|RZ1B_ARATH Glycine-rich RNA-binding protein RZ1B; TrEMBL-Plants: tr|A0A0L9U0Q2|A0A0L9U0Q2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0341900
Domains
18
LotjaGi5g1v0341900.2
– RNA-binding protein; TAIR: AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|O22703|RZ1B_ARATH Glycine-rich RNA-binding protein RZ1B; TrEMBL-Plants: tr|A0A0L9U0Q2|A0A0L9U0Q2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0341900
Domains
17
LotjaGi5g1v0341900.3
– RNA-binding protein; TAIR: AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|O22703|RZ1B_ARATH Glycine-rich RNA-binding protein RZ1B; TrEMBL-Plants: tr|A0A0L9U0Q2|A0A0L9U0Q2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0341900
Domains
18
LotjaGi5g1v0341900.4
– RNA-binding protein; TAIR: AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|O22703|RZ1B_ARATH Glycine-rich RNA-binding protein RZ1B; TrEMBL-Plants: tr|A0A0L9U0Q2|A0A0L9U0Q2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0341900
Domains
17
LotjaGi5g1v0341900.5
– RNA-binding protein; TAIR: AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|O22703|RZ1B_ARATH Glycine-rich RNA-binding protein RZ1B; TrEMBL-Plants: tr|A0A0L9U0Q2|A0A0L9U0Q2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0341900
Domains
17
LotjaGi5g1v0352000.1
– CAX-interacting protein 4; TAIR: AT2G28910.1 CAX interacting protein 4; Swiss-Prot: sp|Q84Y18|CXIP4_ARATH CAX-interacting protein 4; TrEMBL-Plants: tr|I3SNI2|I3SNI2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0352000
Domains
7
LotjaGi5g1v0354300_LC.1
– Transposon protein, putative, mutator sub-class; TAIR: AT3G05850.1 MuDR family transposase; Swiss-Prot: sp|Q88LM5|MURB_PSEPK UDP-N-acetylenolpyruvoylglucosamine reductase; TrEMBL-Plants: tr|A0A1B5Z7A3|A0A1B5Z7A3_TRISU Uncharacterized protein; Found in the gene: LotjaGi5g1v0354300_LC
Domains
10
LotjaGi5g1v0354300_LC.3
– Transposon protein, putative, mutator sub-class; TAIR: AT3G05850.1 MuDR family transposase; Swiss-Prot: sp|Q88LM5|MURB_PSEPK UDP-N-acetylenolpyruvoylglucosamine reductase; TrEMBL-Plants: tr|A0A1B5Z7A3|A0A1B5Z7A3_TRISU Uncharacterized protein; Found in the gene: LotjaGi5g1v0354300_LC
Domains
10
LotjaGi5g1v0356800.1
– RNA binding protein; TAIR: AT3G55340.1 phragmoplastin interacting protein 1; Swiss-Prot: sp|Q7XTT4|NUCL2_ORYSJ Nucleolin 2; TrEMBL-Plants: tr|A0A151U820|A0A151U820_CAJCA Protein gar2; Found in the gene: LotjaGi5g1v0356800
Domains
23
LotjaGi6g1v0015200.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A061EH95|A0A061EH95_THECC Uncharacterized protein; Found in the gene: LotjaGi6g1v0015200
Domains
11
LotjaGi6g1v0020900_LC.1
– Transposon TX1 uncharacterized; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|Q8UEZ0|RPIA_AGRFC Ribose-5-phosphate isomerase A; TrEMBL-Plants: tr|Q1SKZ9|Q1SKZ9_MEDTR Zinc finger, CCHC-type; Found in the gene: LotjaGi6g1v0020900_LC
Domains
7
LotjaGi6g1v0027100_LC.1
– Gag-Pol polyprotein; TAIR: AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|P53849|GIS2_YEAST Zinc finger protein GIS2; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi6g1v0027100_LC
Domains
12
LotjaGi6g1v0037400.1
– Pol polyprotein; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|B8YLY7|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0037400
Domains
25
LotjaGi6g1v0046800.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT3G02820.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P12451|POL_HV2SB Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A061FHZ8|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0046800
Domains
12
LotjaGi6g1v0064900_LC.1
– Gag-Pol polyprotein; TAIR: AT3G42860.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P03354|POL_RSVP Gag-Pro-Pol polyprotein; TrEMBL-Plants: tr|Q949L3|Q949L3_CICAR Putative polyprotein; Found in the gene: LotjaGi6g1v0064900_LC
Domains
10
LotjaGi6g1v0081300_LC.1
– Transposon TX1 uncharacterized; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|Q4JW95|MURG_CORJK UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TrEMBL-Plants: tr|A0A0R0FG98|A0A0R0FG98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0081300_LC
Domains
8
LotjaGi6g1v0113700_LC.1
– Gag-Pol polyprotein; TAIR: AT2G37340.1 arginine/serine-rich zinc knuckle-containing protein 33; Swiss-Prot: sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10; TrEMBL-Plants: tr|A0A151QTG4|A0A151QTG4_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi6g1v0113700_LC
Domains
12
LotjaGi6g1v0113700_LC.2
– Gag-Pol polyprotein; TAIR: AT2G37340.1 arginine/serine-rich zinc knuckle-containing protein 33; Swiss-Prot: sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10; TrEMBL-Plants: tr|A0A151QTG4|A0A151QTG4_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi6g1v0113700_LC
Domains
12
LotjaGi6g1v0114200_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT2G06904.1 nucleic acid / zinc ion binding protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|Q2HU05|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi6g1v0114200_LC
Domains
10
LotjaGi6g1v0125000_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT1G75560.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151RHT9|A0A151RHT9_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi6g1v0125000_LC
Domains
24
LotjaGi6g1v0130600_LC.1
– Gag-Pol polyprotein; TAIR: AT2G37340.1 arginine/serine-rich zinc knuckle-containing protein 33; Swiss-Prot: sp|P34689|GLH1_CAEEL ATP-dependent RNA helicase glh-1; TrEMBL-Plants: tr|A0A151QTG4|A0A151QTG4_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi6g1v0130600_LC
Domains
12
LotjaGi6g1v0140900_LC.1
– Ty3/Gypsy polyprotein/retrotransposon, putative; TAIR: AT3G10400.1 RNA recognition motif and CCHC-type zinc finger domains containing protein; Swiss-Prot: sp|P03543|CAPSD_CAMVC Capsid protein; TrEMBL-Plants: tr|A0A0B2QJ02|A0A0B2QJ02_GLYSO Uncharacterized protein; Found in the gene: LotjaGi6g1v0140900_LC
Domains
11
LotjaGi6g1v0161400_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G53670.1 transmembrane protein; Swiss-Prot: sp|Q966L9|GLH2_CAEEL ATP-dependent RNA helicase glh-2; TrEMBL-Plants: tr|A5BKR0|A5BKR0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0161400_LC
Domains
8
LotjaGi6g1v0165000_LC.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A0B2R495|A0A0B2R495_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0165000_LC
Domains
10
LotjaGi6g1v0182500_LC.1
– Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT1G75560.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P16900|GAG_OMVVS Gag polyprotein; TrEMBL-Plants: tr|A0A151RID1|A0A151RID1_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0182500_LC
Domains
17
LotjaGi6g1v0185800_LC.1
– Gag-Pol polyprotein; TAIR: AT3G43590.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q65XV7|RFA1C_ORYSJ Replication protein A 70 kDa DNA-binding subunit C; TrEMBL-Plants: tr|A0A151RID1|A0A151RID1_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0185800_LC
Domains
13
LotjaGi6g1v0187000.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A5AGK3|A5AGK3_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0187000
Domains
27
LotjaGi6g1v0199700.1
– Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TMN9|A0A151TMN9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0199700
Domains
23
LotjaGi6g1v0214100_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr|A0A151TQZ3|A0A151TQZ3_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC
Domains
30
LotjaGi6g1v0214100_LC.2
– Gag-Pol polyprotein; TAIR: AT1G75560.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|O91080|POL_HV1YF Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151RID1|A0A151RID1_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC
Domains
14
LotjaGi6g1v0214100_LC.3
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC
Domains
44
LotjaGi6g1v0214100_LC.4
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr|A0A151TQZ3|A0A151TQZ3_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC
Domains
30
LotjaGi6g1v0214100_LC.5
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC
Domains
44
LotjaGi6g1v0214100_LC.6
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC
Domains
44
LotjaGi6g1v0214100_LC.7
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC
Domains
44
LotjaGi6g1v0214100_LC.8
– Gag-Pol polyprotein; TAIR: AT3G43590.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|O91080|POL_HV1YF Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151RID1|A0A151RID1_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC
Domains
14
LotjaGi6g1v0214100_LC.9
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC
Domains
44
LotjaGi6g1v0218100_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A061FHZ8|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC
Domains
42
LotjaGi6g1v0218100_LC.2
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A061FHZ8|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC
Domains
42
LotjaGi6g1v0218100_LC.3
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A061FHZ8|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC
Domains
42
LotjaGi6g1v0218100_LC.4
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A061FHZ8|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC
Domains
42
LotjaGi6g1v0218100_LC.5
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT3G02820.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P12451|POL_HV2SB Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A061FHZ8|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC
Domains
12
LotjaGi6g1v0232300_LC.2
– Transposon TX1 uncharacterized; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|Q2SLC0|GCH4_HAHCH GTP cyclohydrolase FolE2; TrEMBL-Plants: tr|A0A0R0FG98|A0A0R0FG98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0232300_LC
Domains
8
LotjaGi6g1v0236800.1
– Cold shock protein; TAIR: AT4G36020.2 cold shock domain protein 1; Swiss-Prot: sp|O65639|CSP1_ARATH Cold shock protein 1; TrEMBL-Plants: tr|V7AVE5|V7AVE5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0236800
Domains
20
LotjaGi6g1v0237000_LC.1
– Cold shock protein; TAIR: AT4G36020.1 cold shock domain protein 1; Swiss-Prot: sp|P27484|GRP2_NICSY Glycine-rich protein 2; TrEMBL-Plants: tr|I1LPN7|I1LPN7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0237000_LC
Domains
20
LotjaGi6g1v0256200_LC.1
– Transposon protein, putative, Mutator sub-class; TAIR: AT1G06740.1 MuDR family transposase; Swiss-Prot: sp|Q642A6|VWA1_RAT von Willebrand factor A domain-containing protein 1; TrEMBL-Plants: tr|A0A1B5Z7A3|A0A1B5Z7A3_TRISU Uncharacterized protein; Found in the gene: LotjaGi6g1v0256200_LC
Domains
5
LotjaGi6g1v0257700_LC.1
– Transposon TX1 uncharacterized; TAIR: AT2G01050.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|O04244|Y4200_ARATH Uncharacterized protein At4g02000; TrEMBL-Plants: tr|A0A151TTK8|A0A151TTK8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0257700_LC
Domains
8
LotjaGi6g1v0262500.1
– Nuclear export mediator factor NEMF like; TAIR: AT5G49930.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q9VBX1|NEMF_DROME Nuclear export mediator factor NEMF homolog; TrEMBL-Plants: tr|I1L0M7|I1L0M7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0262500
Domains
17
LotjaGi6g1v0262500.2
– Nuclear export mediator factor NEMF like; TAIR: AT5G49930.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q9VBX1|NEMF_DROME Nuclear export mediator factor NEMF homolog; TrEMBL-Plants: tr|I1L0M7|I1L0M7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0262500
Domains
17
LotjaGi6g1v0262500.4
– Nuclear export mediator factor NEMF like; TAIR: AT5G49930.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q9VBX1|NEMF_DROME Nuclear export mediator factor NEMF homolog; TrEMBL-Plants: tr|K7LBK1|K7LBK1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0262500
Domains
16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 0.31