Domain Predictions — View

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PTHR37219

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0009536 View details of GO:0009536 AmiGO InterPro QuickGO	Cellular component	Plastid	Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.	Subterm of GO:0043231 GO:0044444
GO:0009658 View details of GO:0009658 AmiGO InterPro QuickGO	Biological process	Chloroplast organization	A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.	Subterm of GO:0009657
GO:0010239 View details of GO:0010239 AmiGO InterPro QuickGO	Biological process	Chloroplast mRNA processing	Steps involved in processing precursor RNAs arising from transcription of operons in the chloroplast genome into mature mRNAs.	Subterm of GO:0006397 GO:0031425
GO:0048366 View details of GO:0048366 AmiGO InterPro QuickGO	Biological process	Leaf development	The process whose specific outcome is the progression of the leaf over time, from its formation to the mature structure.	Subterm of GO:0048827

Associated Lotus transcripts 3

Transcript	Name	Description	Predicted domains	Domain count
Lj5g3v0962410.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein PALE CRESS, chloroplastic-like [Cicer arietinum] gi\|502115549\|ref\|XP_004495231.1\|	Domains CYTOPLASMIC_DOMAIN Coil NON_CYTOPLASMIC_DOMAIN PTHR37219 TMhelix TRANSMEMBRANE	7
Lj5g3v0962410.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PAC [Medicago truncatula] gi\|357440829\|ref\|XP_003590692.1\|	Domains Coil NON_CYTOPLASMIC_DOMAIN PTHR37219 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK	10
LotjaGi5g1v0163600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PALE CRESS protein (PAC); TAIR: AT2G48120.1 pale cress protein (PAC); Swiss-Prot: sp\|Q39089\|PAC_ARATH Protein PALE CRESS, chloroplastic; TrEMBL-Plants: tr\|I1L816\|I1L816_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0163600	Domains Coil IPR034563 NON_CYTOPLASMIC_DOMAIN PTHR37219 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM SignalP-noTM	10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SignalP-noTM	SignalP_GRAM_NEGATIVE	1	33.33