Domain Predictions — View

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PTHR42721:SF23

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0270900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Beta xylosidase; TAIR: AT5G64570.1 beta-D-xylosidase 4; Swiss-Prot: sp\|A5JTQ2\|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1; TrEMBL-Plants: tr\|A0A151T7T5\|A0A151T7T5_CAJCA Beta-D-xylosidase 4; Found in the gene: LotjaGi1g1v0270900_LC	Domains G3DSA:2.60.40.10 G3DSA:3.40.50.1700 IPR002772 IPR013783 IPR026891 IPR036881 PF01915 PF14310 PTHR42721 PTHR42721:SF23 SM01217 SSF52279 TMhelix	13
LotjaGi4g1v0033200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Beta xylosidase; TAIR: AT5G64570.1 beta-D-xylosidase 4; Swiss-Prot: sp\|A5JTQ3\|XYL2_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 2; TrEMBL-Plants: tr\|A0A072UQA9\|A0A072UQA9_MEDTR Beta-xylosidase/alpha-L-arabinofuranosidase-like protein; Found in the gene: LotjaGi4g1v0033200	Domains G3DSA:2.60.40.10 G3DSA:3.20.20.300 G3DSA:3.40.50.1700 IPR001764 IPR002772 IPR013783 IPR017853 IPR026891 IPR036881 IPR036962 NON_CYTOPLASMIC_DOMAIN PF00933 PF01915 PF14310 PR00133 PS51257 PTHR42721 PTHR42721:SF23 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM01217 SSF51445 SSF52279 SignalP-TM SignalP-noTM TMhelix	28
LotjaGi4g1v0033200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Beta xylosidase; TAIR: AT5G64570.1 beta-D-xylosidase 4; Swiss-Prot: sp\|A5JTQ3\|XYL2_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 2; TrEMBL-Plants: tr\|A0A0R0IPH2\|A0A0R0IPH2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0033200	Domains G3DSA:2.60.40.10 G3DSA:3.20.20.300 G3DSA:3.40.50.1700 IPR001764 IPR002772 IPR013783 IPR017853 IPR026891 IPR036881 IPR036962 NON_CYTOPLASMIC_DOMAIN PF00933 PF01915 PF14310 PS51257 PTHR42721 PTHR42721:SF23 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM01217 SSF51445 SSF52279 SignalP-TM SignalP-noTM TMhelix	27
LotjaGi6g1v0354900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Beta xylosidase; TAIR: AT5G64570.1 beta-D-xylosidase 4; Swiss-Prot: sp\|A5JTQ2\|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1; TrEMBL-Plants: tr\|A0A151T7T5\|A0A151T7T5_CAJCA Beta-D-xylosidase 4; Found in the gene: LotjaGi6g1v0354900	Domains G3DSA:2.60.40.10 G3DSA:3.20.20.300 G3DSA:3.40.50.1700 IPR001764 IPR002772 IPR013783 IPR017853 IPR026891 IPR036881 IPR036962 NON_CYTOPLASMIC_DOMAIN PF00933 PF01915 PF14310 PR00133 PTHR42721 PTHR42721:SF23 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM01217 SSF51445 SSF52279 SignalP-TM SignalP-noTM	26
LotjaGi6g1v0354900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Beta xylosidase; TAIR: AT5G09730.1 beta-xylosidase 3; Swiss-Prot: sp\|Q9LXD6\|BXL3_ARATH Beta-D-xylosidase 3; TrEMBL-Plants: tr\|I1KR53\|I1KR53_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0354900	Domains G3DSA:2.60.40.10 G3DSA:3.20.20.300 G3DSA:3.40.50.1700 IPR001764 IPR002772 IPR013783 IPR017853 IPR026891 IPR036881 IPR036962 NON_CYTOPLASMIC_DOMAIN PF00933 PF01915 PF14310 PTHR42721 PTHR42721:SF23 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM01217 SSF51445 SSF52279 SignalP-TM SignalP-noTM	25
LotjaGi6g1v0354900.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Beta xylosidase; TAIR: AT5G64570.1 beta-D-xylosidase 4; Swiss-Prot: sp\|A5JTQ2\|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1; TrEMBL-Plants: tr\|A0A151T7T5\|A0A151T7T5_CAJCA Beta-D-xylosidase 4; Found in the gene: LotjaGi6g1v0354900	Domains G3DSA:2.60.40.10 G3DSA:3.20.20.300 G3DSA:3.40.50.1700 IPR001764 IPR002772 IPR013783 IPR017853 IPR026891 IPR036881 IPR036962 NON_CYTOPLASMIC_DOMAIN PF00933 PF01915 PF14310 PTHR42721 PTHR42721:SF23 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM01217 SSF51445 SSF52279 SignalP-TM SignalP-noTM	25

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SignalP-noTM	SignalP_GRAM_NEGATIVE	1	16.67