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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0354900 |
| Transcript ID | LotjaGi6g1v0354900.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta xylosidase; TAIR: AT5G09730.1 beta-xylosidase 3; Swiss-Prot: sp|Q9LXD6|BXL3_ARATH Beta-D-xylosidase 3; TrEMBL-Plants: tr|I1KR53|I1KR53_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0354900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:66675314..66679613) extracted from Lotus japonicus Gifu genome v1.2.
ACACCCTTTAACTTGAATTTTCCTTTTCAACCATGGCCTGTCTTCTTCAAAACAGAGTCTCTGTTTTGGTCTGTTTTTCA TTCTTTTGCGCCACGGTTTGTGGCCAAACATCGCCGCCTTTTGCCTGCGATGTTACCAAGAACGCATCCTTCGCCGGTTT TGGATTCTGTGACAAGTCATTGCCGGTGGCGGACAGGGTTGCTGACCTTGTGAAGAGGCTGACGTTGCAGGAGAAAATCG GGAACCTGGGGGATTCTGCGGTGGATGTGGGTAGGCTTGGGATTCCGAGGTATGAGTGGTGGTCTGAGGCACTTCATGGG GTTTCCAACATTGGCCCTGGGACTCGTTTTTCCAGTGTGGTTCCTGGTGCTACTAGTTTCCCCATGCCCATTCTCACTGC AGCTTCTTTCAATTCTACCTTGTTTCAAGCCATTGGAAAGGTAAGAATAAGATTGGTTGATTTCCCCCAAATAAGTTGCT ATTTTTATTCATTGAATTTGGTAGTTCTTTCTGAAAATTTGAGATGTTGAATGAGGGGTAGTGTTGTTAATGGCGGATAG CGTAGCATAGCAGTAAGCCCAAAAAACGCTATTTAGAGCGCTATCGGCAAATAACGAACAATAGCGGTGAATAGTGTAGT AGCTGTGAATCCCTGAATCCCGAGGAGGACACTAGGCTATAGCGCTATTGCGTCGTCATAGCACGCTATTAAGAAGCCTG ATGAGGGGTGCTGATATTTCAATTGCTTCATTCCTGAAATTGTGTCATTATATTGATTTAATGAAGTAGAGGGAGGAGAA AATTGAAAACTGAAAACAACAAATCAGAAGATGGTCTTAATGTGGCAGGTTTCAATAGTTAGCTGTGTGTGTATAGGTGT TATAGCATTGAGGTTTGAAGGTATTGATTATTGACCAAAAGAAGTAGATGGGGGTGGTTACAGGGTTGAATATTTTTCAC TCTTCTCTTTTCATTGCTTTTCACATAAAATTGAAAGTCTTTTTAGGTATAAATGTCTGATTGAGCAACAGAATAATAAA TGAAACAAAAGTATGGGTGGGTTCTCTGTGTGAACTTGCAGAATTTGGATTCAGATATTTAATTTAAGATAACTTTTCTC TTTTGGTTCCAGCTTGCATATATTGAAACTAAAGTGAATGACAGAGAGGGCTAGATGTTGATTGTCTACCAATGATGTAA TTAAAAATTTATCAGCCACTCAAATTTCAATTTCTATGAGTAAAGTTAAATGAGAAATTACCAAATTAGTTTCTAATAAT AAAAAAGCATAGTTCATGATATTTTGCAGCAGAAGTGTTTGATTCTGTGGTATAAAGCTATATAATCACTTATGAGAAAA AGCTAGAAAATGTAGTTTCTGAAGTTACCATGCTTTAATGTGTAAACTTGAAAAGGAAAAAAATGTTTATATAGTGGTGT TTATGGATAATTTCTGGTCATTTCAGGTGGTTTCAACAGAAGCACGAGCAATGTACAATGTGGGGTTGGCTGGTTTGACA TATTGGTCACCAAACATTAACATATTCAGAGATCCAAGGTGGGGAAGAGGACAAGAGACACCAGGGGAAGACCCTTTACT AAGTAGCAAATATGCAGCAGGATATGTGAAAGGTCTGCAACAAACTGATGATGGAGACTCCAACAAGCTCAAGGTTGCTG CTTGTTGCAAACACTACACAGCCTATGATGTGGATAACTGGAAAGGTGTTCAGCGTTACACATTCAATGCTGTGGTAATC TACTAGCATGTTTGGATCAACTTATTTTCTCTAGAAACACTCAGAAGCTACTCACAATATTTTTTCTTTAGAATTGATTT TGGCCCTAAAGTTAATTCTAGGAGGATTTCCAAACACACTATACATATGATTGAAAACATGTTGAAGTGATTGCAAGGAT ATAAATTCAGAAAATCATGTTTCTTAGACCTTTTGTTTGTTTTGGCTTTTGGTTTTGTTAGGTGTCACAGCAAGATTTGG ATGACACCTTCCAACCACCATTTAAGAGCTGTGTGATTGATGGGAATGTTGCAAGTGTGATGTGTTCCTACAACCAGGTT AATGGAAAACCAACCTGTGCAGACCCTGACCTTCTTAAGGGGGTTATCCGAGGCCAATGGAAATTGAATGGGTATTTTGA ATTTCTCCTAATCTCATTTAGTTAGGTTAATTATTCACACTTTCTCCACAGGAATAAGAATCTGTGGTTTTTGCAGATAT ATAGTTTCTGACTGTGACTCGGTTGAAGTGCTTTTCAAAGATCAGCATTACACCAAGACTCCTGAAGAAGCTGCAGCCAA ATCCATTCTAGCAGGTAACAAACAAAACTTGAAAAACTATATACATACATATCCAGTGGTAACTGTGGATTGCCAATAAC TTGTTATGGGTTGTAAAAATCTTGGTTTGCACCCTAGTGACATTGTATAGGACACTTTAATTATCTAATCTGGATGTAAA TTTTGATTTCACAGGGTTGGATTTGGACTGTGGAAGCTATCTTGGCAAATATACAGAAGGGGCTGTCAAGCAAGGGCTTT TGGATGAAGCATCCATTAACAATGCTATCTCCAACAATTTCGCCACATTGATGCGACTTGGTTTCTTTGATGGTAATCCA AGCACGCTACCTTATGGGGGCCTTGGTCCAAAGGATGTATGCACATCAGAGAACCAGGAACTCGCCCGGGAAGCTGCAAG GCAAGGGATTGTGTTGCTTAAAAATAGTCCAGGATCACTGCCTCTAAGTGCCAAATCCATTAAATCATTGGCAGTAATAG GCCCCAATGCAAATGCTACTAGGGTCATGATTGGAAACTATGAAGGTATCTACATTTCGTACTCCTATAATTTATATATG GATATCACCTAGGATATGTTCGGATACCAATTGGAACCAGTGTAAACAGACGTTAATACTTACTTTTAGACAAAAAGTGA ACTGAATTCTTATAAATTGAGATGAAAGTCCGTTTACACTAAACTCAACTGGTATCCAAAGACCCTTTAAAGCTGGGAAC TAGGGGAAATGAAGACTTCTTATCTCTACCTTCTGCTTAGCTACACATTTGATTAGTTTCTGAAATTTTGCAGGCATCCC TTGCAAATATATATCACCTTTGCAAGGCCTAACAGCCTTGGTTCCTACAAGCTATGTTCCTGGCTGTCCTGATGTGCATT GCGCCAGTGCACAGCTAGACGATGCCACAAAGATTGCAGCATCTTCAGATGCAACTGTGATTGTAGTGGGTGCAAGTCTA GCTATAGAGGCAGAAAGTCTCGACAGAGTTAACATTGTTCTTCCAGGACAGCAGCAACTTCTAGTGAGTGAAGTTGCTAA TGCATCCAGGGGACCTGTAATTCTTGTCATAATGTCTGGAGGAGGCATGGATGTGTCATTTGCTAAAGCTAATGATAAAA TCACAAGTATCTTGTGGGTTGGCTACCCTGGCGAAGCTGGTGGAGCTGCCATAGCTGATGTGATTTTTGGCTTTTACAAT CCAAGTAAGTGCACGATTGAATATTCTTCTACAATTGATTGTTAAGTCAGAATCAATTGTGAGAAAAACCTTCTTTGAGT AAATTATGGGTTGAATATTAGCAAAAAGAAGCTAATCCAAACATGTTGTTCGTCACTATGATCTCCCGTGCATCAAAATT TCCAAATTTATACTGACACAACTTTGTATGAATGATTTTGTGATGCAGGTGGAAGGCTACCCATGACATGGTATCCAGAA TCATATGTAGAAAATGTTCCAATGACAAACATGAACATGAGGGCAGATCCTTCTACAGGTTACCCGGGTAGAACTTACAG ATTTTATAAAGGTGAAACTGTTTTCTCATTTGGTGATGGAATAGGCTACTCCAACGTTGAGCACAAAATAGTTAAAGCAC CGCAGTTGGTGTTTGTTCCTCTAGCAGAGGATCATGTATGCCGGTCCTCAGAATGCAAGTCACTTGATGTTGCTGATGAG CATTGTCAAAACATGGCATTTGATATTCACCTTAGGGTCAAGAACATGGGGAAAATGAGCAGTAGCCATACTGTGTTATT GTTCTTTACTCCTCCAGCAGTGCACAATGCCCCTCAGAAACACTTGTTGGGTATTGAGAAAGTGCACTTGGCAGGAAAAT CAGAAGCACAAGTTAGGTTCATGGTAGATGTTTGTAAGGATTTGAGTGTGGTTGATGAACTTGGCAATAGGAGAGTTCCA TTGGGGCAGCATCTGCTTCATGTGGGAAACTTGAAGTATCCATTGAGCGTGAGGATTTGA
CDS sequence (LotjaGi6g1v0354900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCTGTCTTCTTCAAAACAGAGTCTCTGTTTTGGTCTGTTTTTCATTCTTTTGCGCCACGGTTTGTGGCCAAACATC GCCGCCTTTTGCCTGCGATGTTACCAAGAACGCATCCTTCGCCGGTTTTGGATTCTGTGACAAGTCATTGCCGGTGGCGG ACAGGGTTGCTGACCTTGTGAAGAGGCTGACGTTGCAGGAGAAAATCGGGAACCTGGGGGATTCTGCGGTGGATGTGGGT AGGCTTGGGATTCCGAGGTATGAGTGGTGGTCTGAGGCACTTCATGGGGTTTCCAACATTGGCCCTGGGACTCGTTTTTC CAGTGTGGTTCCTGGTGCTACTAGTTTCCCCATGCCCATTCTCACTGCAGCTTCTTTCAATTCTACCTTGTTTCAAGCCA TTGGAAAGGTGGTTTCAACAGAAGCACGAGCAATGTACAATGTGGGGTTGGCTGGTTTGACATATTGGTCACCAAACATT AACATATTCAGAGATCCAAGGTGGGGAAGAGGACAAGAGACACCAGGGGAAGACCCTTTACTAAGTAGCAAATATGCAGC AGGATATGTGAAAGGTCTGCAACAAACTGATGATGGAGACTCCAACAAGCTCAAGGTTGCTGCTTGTTGCAAACACTACA CAGCCTATGATGTGGATAACTGGAAAGGTGTTCAGCGTTACACATTCAATGCTGTGGTGTCACAGCAAGATTTGGATGAC ACCTTCCAACGGTTGGATTTGGACTGTGGAAGCTATCTTGGCAAATATACAGAAGGGGCTGTCAAGCAAGGGCTTTTGGA TGAAGCATCCATTAACAATGCTATCTCCAACAATTTCGCCACATTGATGCGACTTGGTTTCTTTGATGGTAATCCAAGCA CGCTACCTTATGGGGGCCTTGGTCCAAAGGATGTATGCACATCAGAGAACCAGGAACTCGCCCGGGAAGCTGCAAGGCAA GGGATTGTGTTGCTTAAAAATAGTCCAGGATCACTGCCTCTAAGTGCCAAATCCATTAAATCATTGGCAGTAATAGGCCC CAATGCAAATGCTACTAGGGTCATGATTGGAAACTATGAAGGCATCCCTTGCAAATATATATCACCTTTGCAAGGCCTAA CAGCCTTGGTTCCTACAAGCTATGTTCCTGGCTGTCCTGATGTGCATTGCGCCAGTGCACAGCTAGACGATGCCACAAAG ATTGCAGCATCTTCAGATGCAACTGTGATTGTAGTGGGTGCAAGTCTAGCTATAGAGGCAGAAAGTCTCGACAGAGTTAA CATTGTTCTTCCAGGACAGCAGCAACTTCTAGTGAGTGAAGTTGCTAATGCATCCAGGGGACCTGTAATTCTTGTCATAA TGTCTGGAGGAGGCATGGATGTGTCATTTGCTAAAGCTAATGATAAAATCACAAGTATCTTGTGGGTTGGCTACCCTGGC GAAGCTGGTGGAGCTGCCATAGCTGATGTGATTTTTGGCTTTTACAATCCAAGTGGAAGGCTACCCATGACATGGTATCC AGAATCATATGTAGAAAATGTTCCAATGACAAACATGAACATGAGGGCAGATCCTTCTACAGGTTACCCGGGTAGAACTT ACAGATTTTATAAAGGTGAAACTGTTTTCTCATTTGGTGATGGAATAGGCTACTCCAACGTTGAGCACAAAATAGTTAAA GCACCGCAGTTGGTGTTTGTTCCTCTAGCAGAGGATCATGTATGCCGGTCCTCAGAATGCAAGTCACTTGATGTTGCTGA TGAGCATTGTCAAAACATGGCATTTGATATTCACCTTAGGGTCAAGAACATGGGGAAAATGAGCAGTAGCCATACTGTGT TATTGTTCTTTACTCCTCCAGCAGTGCACAATGCCCCTCAGAAACACTTGTTGGGTATTGAGAAAGTGCACTTGGCAGGA AAATCAGAAGCACAAGTTAGGTTCATGGTAGATGTTTGTAAGGATTTGAGTGTGGTTGATGAACTTGGCAATAGGAGAGT TCCATTGGGGCAGCATCTGCTTCATGTGGGAAACTTGAAGTATCCATTGAGCGTGAGGATTTGA
Protein sequence (LotjaGi6g1v0354900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MACLLQNRVSVLVCFSFFCATVCGQTSPPFACDVTKNASFAGFGFCDKSLPVADRVADLVKRLTLQEKIGNLGDSAVDVG RLGIPRYEWWSEALHGVSNIGPGTRFSSVVPGATSFPMPILTAASFNSTLFQAIGKVVSTEARAMYNVGLAGLTYWSPNI NIFRDPRWGRGQETPGEDPLLSSKYAAGYVKGLQQTDDGDSNKLKVAACCKHYTAYDVDNWKGVQRYTFNAVVSQQDLDD TFQRLDLDCGSYLGKYTEGAVKQGLLDEASINNAISNNFATLMRLGFFDGNPSTLPYGGLGPKDVCTSENQELAREAARQ GIVLLKNSPGSLPLSAKSIKSLAVIGPNANATRVMIGNYEGIPCKYISPLQGLTALVPTSYVPGCPDVHCASAQLDDATK IAASSDATVIVVGASLAIEAESLDRVNIVLPGQQQLLVSEVANASRGPVILVIMSGGGMDVSFAKANDKITSILWVGYPG EAGGAAIADVIFGFYNPSGRLPMTWYPESYVENVPMTNMNMRADPSTGYPGRTYRFYKGETVFSFGDGIGYSNVEHKIVK APQLVFVPLAEDHVCRSSECKSLDVADEHCQNMAFDIHLRVKNMGKMSSSHTVLLFFTPPAVHNAPQKHLLGIEKVHLAG KSEAQVRFMVDVCKDLSVVDELGNRRVPLGQHLLHVGNLKYPLSVRI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 31 | 31 | - | – | |
| Phobius | 9 | 19 | 11 | - | – | |
| PANTHER | 10 | 243 | 234 | 0.0 | – | |
| PANTHER | 10 | 243 | 234 | 0.0 | – | |
| Phobius | 20 | 24 | 5 | - | – | |
| Phobius | 25 | 687 | 663 | - | – | |
| SUPERFAMILY | 45 | 321 | 277 | 2.0E-52 | ||
| Gene3D | 54 | 245 | 192 | 9.1E-49 | ||
| Pfam | 112 | 223 | 112 | 1.2E-16 | ||
| PANTHER | 245 | 687 | 443 | 0.0 | – | |
| PANTHER | 245 | 687 | 443 | 0.0 | – | |
| Gene3D | 308 | 552 | 245 | 9.9E-59 | ||
| Pfam | 322 | 551 | 230 | 3.6E-50 | ||
| SUPERFAMILY | 322 | 553 | 232 | 5.75E-44 | ||
| Gene3D | 579 | 686 | 108 | 5.6E-9 | ||
| SMART | 611 | 680 | 70 | 4.7E-10 | ||
| Pfam | 611 | 678 | 68 | 3.4E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi6g1v0354900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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