Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PTHR46158:SF2

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0002200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein; TAIR: AT5G60580.1 RING/U-box superfamily protein; Swiss-Prot: sp\|F4JKK0\|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr\|I1M648\|I1M648_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0002200	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.30.40.10 IPR011016 IPR013083 NON_CYTOPLASMIC_DOMAIN PF12906 PS51292 PTHR46158 PTHR46158:SF2 SM00744 SSF57850 TMhelix TRANSMEMBRANE cd16495 mobidb-lite	16
LotjaGi1g1v0002200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein; TAIR: AT5G60580.1 RING/U-box superfamily protein; Swiss-Prot: sp\|F4JKK0\|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr\|K7KBS7\|K7KBS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0002200	Domains G3DSA:3.30.40.10 IPR011016 IPR013083 PF12906 PS51292 PTHR46158 PTHR46158:SF2 SM00744 SSF57850 cd16495 mobidb-lite	11
LotjaGi1g1v0002200.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein; TAIR: AT5G60580.1 RING/U-box superfamily protein; Swiss-Prot: sp\|F4JKK0\|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr\|I1M648\|I1M648_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0002200	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR011016 IPR013083 NON_CYTOPLASMIC_DOMAIN PF12906 PS51292 PTHR46158 PTHR46158:SF2 SM00744 SSF57850 TRANSMEMBRANE cd16495 mobidb-lite	14
LotjaGi6g1v0029400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein; TAIR: AT5G60580.1 RING/U-box superfamily protein; Swiss-Prot: sp\|F4JKK0\|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr\|A0A0S3S866\|A0A0S3S866_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0029400	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR011016 IPR013083 NON_CYTOPLASMIC_DOMAIN PF12906 PS51292 PTHR46158 PTHR46158:SF2 SM00744 SSF57850 TMhelix TRANSMEMBRANE cd16495 mobidb-lite	15
LotjaGi6g1v0029400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein; TAIR: AT5G60580.1 RING/U-box superfamily protein; Swiss-Prot: sp\|F4JKK0\|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr\|A0A0S3S866\|A0A0S3S866_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0029400	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 IPR011016 IPR013083 NON_CYTOPLASMIC_DOMAIN PF12906 PS51292 PTHR46158 PTHR46158:SF2 SM00744 SSF57850 TMhelix TRANSMEMBRANE cd16495 cd17324 mobidb-lite	16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	20.00