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PF12906

Source: Pfam

Description

RING-variant domain

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008270
Molecular function Zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
Subterm of

Associated Lotus transcripts 68

Transcript Name Description Predicted domains Domain count
Lj0g3v0017039.1
– Protein binding protein [Arabidopsis lyrata subsp]. lyrata] gi|297821411|ref|XP_002878588.1|
Domains
10
Lj0g3v0181969.1
– Protein binding protein [Medicago truncatula] gi|357453889|ref|XP_003597225.1|
Domains
15
Lj0g3v0209169.1
– RING/FYVE/PHD zinc finger superfamily protein [Theobroma cacao] gi|508715442|gb|EOY07339.1|
Domains
14
Lj0g3v0223009.1
– E3 ubiquitin-protein ligase MARCH6 [Medicago truncatula] gi|357442271|ref|XP_003591413.1|
Domains
17
Lj0g3v0298859.1
– RING/FYVE/PHD zinc finger superfamily protein [Theobroma cacao] gi|508726041|gb|EOY17938.1|
Domains
15
Lj0g3v0300769.1
– RING/U-box superfamily protein isoform 1 [Theobroma cacao] gi|508787081|gb|EOY34337.1|
Domains
11
Lj0g3v0333099.1
– E3 ubiquitin-protein ligase MARCH3 [Medicago truncatula] gi|357477907|ref|XP_003609239.1|
Domains
15
Lj0g3v0349369.1
– RING/FYVE/PHD zinc finger superfamily protein [Theobroma cacao] gi|508715442|gb|EOY07339.1|
Domains
14
Lj1g3v3244520.2
– E3 ubiquitin-protein ligase MARCH2 [Medicago truncatula] gi|357508253|ref|XP_003624415.1|
Domains
16
Lj1g3v3438900.1
– RING/FYVE/PHD zinc finger superfamily protein [Theobroma cacao] gi|508715442|gb|EOY07339.1|
Domains
14
Lj1g3v4862890.1
– E3 ubiquitin-protein ligase MARCH3 [Medicago truncatula] gi|357511349|ref|XP_003625963.1|
Domains
16
Lj2g3v1277880.1
– E3 ubiquitin-protein ligase MARCH3 [Medicago truncatula] gi|357486961|ref|XP_003613768.1|
Domains
18
Lj2g3v2688000.1
– RING/FYVE/PHD zinc finger superfamily protein [Theobroma cacao] gi|508726041|gb|EOY17938.1|
Domains
15
Lj2g3v3340820.1
– RING/U-box superfamily protein isoform 1 [Theobroma cacao] gi|508701146|gb|EOX93042.1|
Domains
15
Lj2g3v3341890.1
– RING/U-box superfamily protein isoform 1 [Theobroma cacao] gi|508701146|gb|EOX93042.1|
Domains
15
Lj2g3v3341890.2
– RING/U-box superfamily protein isoform 2 [Theobroma cacao] gi|508701147|gb|EOX93043.1|
Domains
14
Lj2g3v3341890.3
– RING/U-box superfamily protein isoform 1 [Theobroma cacao] gi|508701146|gb|EOX93042.1|
Domains
15
Lj3g3v0000030.1
– RING/FYVE/PHD zinc finger superfamily protein isoform 2 [Theobroma cacao] gi|508779080|gb|EOY26336.1|
Domains
15
Lj3g3v3085860.1
– PREDICTED: E3 ubiquitin-protein ligase MARCH7-like isoform X1 [Cicer arietinum] gi|502145333|ref|XP_004505986.1|
Domains
14
Lj4g3v0620270.1
– PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Glycine max] gi|356499761|ref|XP_003518705.1|
Domains
14
Lj4g3v0620270.2
– PREDICTED: E3 ubiquitin-protein ligase MARCH6-like isoform X1 [Cicer arietinum] gi|502143176|ref|XP_004505246.1|
Domains
14
Lj4g3v1813520.1
– E3 ubiquitin-protein ligase MARCH3 [Medicago truncatula] gi|357477907|ref|XP_003609239.1|
Domains
15
Lj4g3v2605810.1
– PREDICTED: pentatricopeptide repeat-containing protein At4g18750, chloroplastic-like [Glycine max] gi|356557757|ref|XP_003547177.1|
Domains
10
Lj5g3v0626850.1
– RING/U-box superfamily protein isoform 1 [Theobroma cacao] gi|508787081|gb|EOY34337.1|
Domains
15
Lj5g3v2166220.1
– E3 ubiquitin-protein ligase MARCH2 [Medicago truncatula] gi|357444557|ref|XP_003592556.1|
Domains
16
Lj6g3v1916080.1
– E3 ubiquitin-protein ligase MARCH1 [Medicago truncatula] gi|357447501|ref|XP_003594026.1|
Domains
14
Lj6g3v1916080.2
– E3 ubiquitin-protein ligase MARCH1 [Medicago truncatula] gi|357447501|ref|XP_003594026.1|
Domains
15
LotjaGi1g1v0002200.1
– RING/U-box superfamily protein; TAIR: AT5G60580.1 RING/U-box superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|I1M648|I1M648_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0002200
Domains
16
LotjaGi1g1v0002200.2
– RING/U-box superfamily protein; TAIR: AT5G60580.1 RING/U-box superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|K7KBS7|K7KBS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0002200
Domains
11
LotjaGi1g1v0002200.3
– RING/U-box superfamily protein; TAIR: AT5G60580.1 RING/U-box superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|I1M648|I1M648_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0002200
Domains
14
LotjaGi1g1v0083000.1
– RING/FYVE/PHD zinc finger superfamily protein; TAIR: AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q6NZQ8|MARH1_MOUSE E3 ubiquitin-protein ligase MARCH1; TrEMBL-Plants: tr|G7KBU1|G7KBU1_MEDTR RING/FYVE/PHD zinc finger protein; Found in the gene: LotjaGi1g1v0083000
Domains
15
LotjaGi1g1v0502800_LC.1
– RING/FYVE/PHD zinc finger superfamily protein; TAIR: AT2G01275.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|K7MUH1|K7MUH1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0502800_LC
Domains
14
LotjaGi1g1v0502900.1
– RING/FYVE/PHD zinc finger superfamily protein; TAIR: AT2G01275.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|O60337|MARH6_HUMAN E3 ubiquitin-protein ligase MARCH6; TrEMBL-Plants: tr|K7MUH1|K7MUH1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0502900
Domains
14
LotjaGi1g1v0544500.1
– RING/FYVE/PHD zinc finger superfamily protein; TAIR: AT2G01275.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q8TCQ1|MARH1_HUMAN E3 ubiquitin-protein ligase MARCH1; TrEMBL-Plants: tr|I3SA13|I3SA13_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0544500
Domains
17
LotjaGi1g1v0574100.1
– RING/FYVE/PHD zinc finger superfamily protein; TAIR: AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q99M02|MARH2_MOUSE E3 ubiquitin-protein ligase MARCH2; TrEMBL-Plants: tr|A0A0B2Q3N5|A0A0B2Q3N5_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0574100
Domains
14
LotjaGi1g1v0760400.1
– RING/FYVE/PHD zinc finger superfamily protein; TAIR: AT1G02610.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|G7KST0|G7KST0_MEDTR RING/FYVE/PHD zinc finger protein; Found in the gene: LotjaGi1g1v0760400
Domains
17
LotjaGi1g1v0760400.2
– RING/FYVE/PHD zinc finger superfamily protein; TAIR: AT1G02610.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|G7KST0|G7KST0_MEDTR RING/FYVE/PHD zinc finger protein; Found in the gene: LotjaGi1g1v0760400
Domains
17
LotjaGi2g1v0303500.1
– RING/FYVE/PHD zinc finger superfamily protein; TAIR: AT2G02960.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|A0A151TFN2|A0A151TFN2_CAJCA E3 ubiquitin-protein ligase Doa10; Found in the gene: LotjaGi2g1v0303500
Domains
19
LotjaGi2g1v0303500.2
– RING/FYVE/PHD zinc finger superfamily protein; TAIR: AT2G02960.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|A0A151TFN2|A0A151TFN2_CAJCA E3 ubiquitin-protein ligase Doa10; Found in the gene: LotjaGi2g1v0303500
Domains
19
LotjaGi2g1v0360500.1
– RING/U-box superfamily protein; TAIR: AT5G60580.2 RING/U-box superfamily protein; Swiss-Prot: sp|Q0P496|MARH4_DANRE E3 ubiquitin-protein ligase MARCH4; TrEMBL-Plants: tr|A0A072UK25|A0A072UK25_MEDTR RING/U-box protein; Found in the gene: LotjaGi2g1v0360500
Domains
11
LotjaGi2g1v0360500.2
– RING/U-box superfamily protein; TAIR: AT5G60580.1 RING/U-box superfamily protein; Swiss-Prot: sp|Q3TZ87|MARH9_MOUSE E3 ubiquitin-protein ligase MARCH9; TrEMBL-Plants: tr|I1LQV9|I1LQV9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0360500
Domains
16
LotjaGi2g1v0360500.3
– RING/U-box superfamily protein; TAIR: AT5G60580.1 RING/U-box superfamily protein; Swiss-Prot: sp|Q3TZ87|MARH9_MOUSE E3 ubiquitin-protein ligase MARCH9; TrEMBL-Plants: tr|I1LQV9|I1LQV9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0360500
Domains
16
LotjaGi3g1v0000700.1
– E3 ubiquitin-protein ligase MARCH8; TAIR: AT1G50440.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q9DBD2|MARH8_MOUSE E3 ubiquitin-protein ligase MARCH8; TrEMBL-Plants: tr|C6TC27|C6TC27_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0000700
Domains
15
LotjaGi3g1v0000700.2
– RING zinc finger-containing protein; TAIR: AT1G50440.5 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q8TCQ1|MARH1_HUMAN E3 ubiquitin-protein ligase MARCH1; TrEMBL-Plants: tr|A0A0R0GZA9|A0A0R0GZA9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0000700
Domains
15
LotjaGi3g1v0000700.3
– E3 ubiquitin-protein ligase MARCH8; TAIR: AT1G50440.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q9DBD2|MARH8_MOUSE E3 ubiquitin-protein ligase MARCH8; TrEMBL-Plants: tr|C6TC27|C6TC27_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0000700
Domains
15
LotjaGi3g1v0162000.1
– RING/U-box superfamily protein; TAIR: AT5G60580.1 RING/U-box superfamily protein; Swiss-Prot: sp|Q5XI50|MARH7_RAT E3 ubiquitin-protein ligase MARCH7; TrEMBL-Plants: tr|G7IRR0|G7IRR0_MEDTR RING/U-box protein; Found in the gene: LotjaGi3g1v0162000
Domains
16
LotjaGi3g1v0162000.2
– RING/U-box superfamily protein; TAIR: AT5G60580.1 RING/U-box superfamily protein; Swiss-Prot: sp|Q5XI50|MARH7_RAT E3 ubiquitin-protein ligase MARCH7; TrEMBL-Plants: tr|A0A072VMH2|A0A072VMH2_MEDTR RING/U-box protein; Found in the gene: LotjaGi3g1v0162000
Domains
11
LotjaGi3g1v0218600.1
– RING/FYVE/PHD zinc finger superfamily protein; TAIR: AT2G37950.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q99M02|MARH2_MOUSE E3 ubiquitin-protein ligase MARCH2; TrEMBL-Plants: tr|A0A151RT35|A0A151RT35_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0218600
Domains
13
LotjaGi4g1v0076800.1
– E3 ubiquitin-protein ligase MARCH6; TAIR: AT4G34100.2 RING/U-box superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|I1JE11|I1JE11_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0076800
Domains
15
LotjaGi4g1v0076800.2
– E3 ubiquitin-protein ligase MARCH6; TAIR: AT4G34100.2 RING/U-box superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|I1JE11|I1JE11_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0076800
Domains
15
LotjaGi4g1v0076800.3
– RING/U-box superfamily protein; TAIR: AT4G34100.2 RING/U-box superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|I1JE11|I1JE11_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0076800
Domains
15
LotjaGi4g1v0076800.4
– E3 ubiquitin-protein ligase MARCH6; TAIR: AT4G34100.2 RING/U-box superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|I1JE11|I1JE11_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0076800
Domains
15
LotjaGi4g1v0266400.1
– E3 ubiquitin-protein ligase MARCH1; TAIR: AT1G11020.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q6NZQ8|MARH1_MOUSE E3 ubiquitin-protein ligase MARCH1; TrEMBL-Plants: tr|I3T6H9|I3T6H9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0266400
Domains
15
LotjaGi4g1v0266400.2
– E3 ubiquitin-protein ligase MARCH1; TAIR: AT1G11020.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q6NZQ8|MARH1_MOUSE E3 ubiquitin-protein ligase MARCH1; TrEMBL-Plants: tr|I3T6H9|I3T6H9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0266400
Domains
15
LotjaGi4g1v0378800.1
– RING/FYVE/PHD zinc finger superfamily protein, putative; TAIR: AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q0VD59|MARH8_BOVIN E3 ubiquitin-protein ligase MARCH8; TrEMBL-Plants: tr|K7KQI7|K7KQI7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0378800
Domains
13
LotjaGi5g1v0077300.1
– RING/U-box superfamily protein; TAIR: AT3G09760.1 RING/U-box superfamily protein; Swiss-Prot: sp|Q5XIV2|MARHA_RAT Probable E3 ubiquitin-protein ligase MARCH10; TrEMBL-Plants: tr|A0A151U466|A0A151U466_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0077300
Domains
11
LotjaGi5g1v0077300.2
– RING/U-box superfamily protein; TAIR: AT3G09760.1 RING/U-box superfamily protein; Swiss-Prot: sp|Q5XI50|MARH7_RAT E3 ubiquitin-protein ligase MARCH7; TrEMBL-Plants: tr|A0A151U466|A0A151U466_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0077300
Domains
16
LotjaGi5g1v0077300.3
– RING/U-box superfamily protein; TAIR: AT3G09760.1 RING/U-box superfamily protein; Swiss-Prot: sp|Q5XI50|MARH7_RAT E3 ubiquitin-protein ligase MARCH7; TrEMBL-Plants: tr|A0A151U466|A0A151U466_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0077300
Domains
11
LotjaGi5g1v0245700.1
– RING/FYVE/PHD zinc finger superfamily protein; TAIR: AT1G02610.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|I3T2U2|I3T2U2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0245700
Domains
18
LotjaGi5g1v0245700.2
– RING/FYVE/PHD zinc finger superfamily protein; TAIR: AT1G02610.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|I3T2U2|I3T2U2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0245700
Domains
18
LotjaGi5g1v0331400.1
– RING/FYVE/PHD zinc finger superfamily protein; TAIR: AT2G01275.3 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|G7IAT6|G7IAT6_MEDTR RING/FYVE/PHD zinc finger protein; Found in the gene: LotjaGi5g1v0331400
Domains
17
LotjaGi5g1v0331400.2
– RING/FYVE/PHD zinc finger superfamily protein; TAIR: AT2G01275.3 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|G7IAT6|G7IAT6_MEDTR RING/FYVE/PHD zinc finger protein; Found in the gene: LotjaGi5g1v0331400
Domains
17
LotjaGi6g1v0029400.1
– RING/U-box superfamily protein; TAIR: AT5G60580.1 RING/U-box superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|A0A0S3S866|A0A0S3S866_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0029400
Domains
15
LotjaGi6g1v0029400.2
– RING/U-box superfamily protein; TAIR: AT5G60580.1 RING/U-box superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|A0A0S3S866|A0A0S3S866_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0029400
Domains
16
LotjaGi6g1v0084400.1
– RING zinc finger-containing protein; TAIR: AT2G22120.2 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|P40318|DOA10_YEAST ERAD-associated E3 ubiquitin-protein ligase DOA10; TrEMBL-Plants: tr|I1MYV9|I1MYV9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0084400
Domains
14
LotjaGi6g1v0304500.1
– RING/U-box superfamily protein; TAIR: AT3G06330.1 RING/U-box superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|I1MF85|I1MF85_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0304500
Domains
16
LotjaGi6g1v0304500.2
– RING/U-box superfamily protein; TAIR: AT3G06330.1 RING/U-box superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|I1MF85|I1MF85_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0304500
Domains
16
LotjaGi6g1v0321100_LC.1
– RING/FYVE/PHD zinc finger superfamily protein, putative; TAIR: AT2G34200.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q8NA82|MARHA_HUMAN Probable E3 ubiquitin-protein ligase MARCH10; TrEMBL-Plants: tr|I1JU96|I1JU96_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0321100_LC
Domains
9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF57850 SUPERFAMILY 1 1.47