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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Transcription factor TFIID complex | A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters. | ||
| Biological process | Transcription initiation from RNA polymerase II promoter | Any process involved in the assembly of the RNA polymerase II preinitiation complex (PIC) at an RNA polymerase II promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. The initiation phase includes PIC assembly and the formation of the first few bonds in the RNA chain, including abortive initiation, which occurs when the first few nucleotides are repeatedly synthesized and then released. Promoter clearance, or release, is the transition between the initiation and elongation phases of transcription. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Transcription initiation factor TFIID subunit [Medicago truncatula] gi|357462725|ref|XP_003601644.1| | 5 | ||
| – | Transcription initiation factor TFIID subunit 7; TAIR: AT1G55300.2 TBP-associated factor 7; Swiss-Prot: sp|B9DG24|TAF7_ARATH Transcription initiation factor TFIID subunit 7; TrEMBL-Plants: tr|K7M6Z5|K7M6Z5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0035900 | 7 | ||
| – | Transcription initiation factor TFIID subunit 7; TAIR: AT1G55300.1 TBP-associated factor 7; Swiss-Prot: sp|B9DG24|TAF7_ARATH Transcription initiation factor TFIID subunit 7; TrEMBL-Plants: tr|I1KFI5|I1KFI5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0035900 | 8 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 33.33 |