Domain Predictions — View

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SSF102735

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0006457 View details of GO:0006457 AmiGO InterPro QuickGO	Biological process	Protein folding	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.	Subterm of GO:0009987
GO:0015031 View details of GO:0015031 AmiGO InterPro QuickGO	Biological process	Protein transport	The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.	Subterm of GO:0015833 GO:0045184

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0319359.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: trigger factor-like [Cicer arietinum] gi\|502127355\|ref\|XP_004499671.1\|	Domains G3DSA:3.30.70.1050 IPR008881 PF05697 PTHR30560 PTHR30560:SF4 SSF102735	6
Lj2g3v3210780.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: trigger factor-like [Glycine max] gi\|356552817\|ref\|XP_003544759.1\|	Domains G3DSA:3.30.70.1050 IPR008881 NON_CYTOPLASMIC_DOMAIN PF05697 PTHR30560 PTHR30560:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF102735	11
LotjaGi1g1v0024000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Trigger factor; TAIR: AT5G55220.1 trigger factor type chaperone family protein; Swiss-Prot: sp\|Q8S9L5\|TIG_ARATH Trigger factor-like protein TIG, Chloroplastic; TrEMBL-Plants: tr\|I1JJE0\|I1JJE0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0024000	Domains Coil G3DSA:1.10.3120.10 G3DSA:3.10.50.40 G3DSA:3.30.70.1050 IPR005215 IPR008880 IPR008881 IPR027304 IPR036611 IPR037041 MF_00303 NON_CYTOPLASMIC_DOMAIN PF05697 PF05698 PTHR30560 PTHR30560:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF102735 SSF109998 SSF54534	23
LotjaGi3g1v0501900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Trigger factor-like protein, putative; TAIR: AT2G30695.1 bacterial trigger factor; Swiss-Prot: sp\|Q5N1P5\|TIG_SYNP6 Trigger factor; TrEMBL-Plants: tr\|I3S2E8\|I3S2E8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0501900	Domains G3DSA:3.30.70.1050 IPR005215 IPR008881 IPR036611 NON_CYTOPLASMIC_DOMAIN PF05697 PTHR30560 PTHR30560:SF4 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF102735 SignalP-TM	14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SignalP-TM	SignalP_GRAM_NEGATIVE	1	25.00