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TIGR00382

Source: TIGRFAM

Description

clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006457
Biological process Protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
Subterm of
GO:0051082
Molecular function Unfolded protein binding Interacting selectively and non-covalently with an unfolded protein.
Subterm of

Associated Lotus transcripts 8

Transcript Name Description Predicted domains Domain count
Lj0g3v0058969.1
– PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like [Fragaria vesca subsp]. vesca] gi|470128173|ref|XP_004300022.1|
Domains
22
Lj0g3v0273379.1
– PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like [Cicer arietinum] gi|502162893|ref|XP_004512653.1|
Domains
24
Lj0g3v0291009.1
– PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like isoform X1 [Cicer arietinum] gi|502136340|ref|XP_004502651.1|
Domains
12
LotjaGi1g1v0286700.1
– ATP-dependent Clp protease ATP-binding subunit clpX; TAIR: AT5G53350.1 CLP protease regulatory subunit X; Swiss-Prot: sp|Q9FK07|CLPX1_ARATH CLP protease regulatory subunit CLPX1, mitochondrial; TrEMBL-Plants: tr|A0A0S3RDV9|A0A0S3RDV9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0286700
Domains
17
LotjaGi2g1v0162800.1
– ATP-dependent Clp protease ATP-binding subunit ClpX; TAIR: AT1G33360.1 ATP-dependent Clp protease; Swiss-Prot: sp|Q66GN9|CLPX3_ARATH CLP protease regulatory subunit CLPX3, mitochondrial; TrEMBL-Plants: tr|I1MQ99|I1MQ99_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0162800
Domains
16
LotjaGi2g1v0162800.2
– ATP-dependent Clp protease ATP-binding subunit ClpX; TAIR: AT1G33360.1 ATP-dependent Clp protease; Swiss-Prot: sp|Q66GN9|CLPX3_ARATH CLP protease regulatory subunit CLPX3, mitochondrial; TrEMBL-Plants: tr|I1MQ99|I1MQ99_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0162800
Domains
24
LotjaGi4g1v0001900.1
– ATP-dependent Clp protease ATP-binding subunit ClpX; TAIR: AT5G49840.2 ATP-dependent Clp protease; Swiss-Prot: sp|F4K7F6|CLPX2_ARATH CLP protease regulatory subunit CLPX2, mitochondrial; TrEMBL-Plants: tr|A0A061GFF2|A0A061GFF2_THECC ATP-dependent Clp protease isoform 2; Found in the gene: LotjaGi4g1v0001900
Domains
22
LotjaGi5g1v0195500.1
– ATP-dependent Clp protease ATP-binding subunit ClpX; TAIR: AT5G53350.1 CLP protease regulatory subunit X; Swiss-Prot: sp|Q9FK07|CLPX1_ARATH CLP protease regulatory subunit CLPX1, mitochondrial; TrEMBL-Plants: tr|A0A1J7G8K0|A0A1J7G8K0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0195500
Domains
17

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 12.50