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TIGR00435

Source: TIGRFAM

Description

cysS: cysteine--tRNA ligase

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004817
Molecular function Cysteine-tRNA ligase activity Catalysis of the reaction: ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys).
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006423
Biological process Cysteinyl-tRNA aminoacylation The process of coupling cysteine to cysteinyl-tRNA, catalyzed by cysteinyl-tRNA synthetase. A cysteinyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a cysteine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.
Subterm of

Associated Lotus transcripts 8

Transcript Name Description Predicted domains Domain count
Lj1g3v1856380.1
– PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max] gi|356515262|ref|XP_003526320.1|
Domains
15
Lj1g3v1856380.2
– PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max] gi|356515262|ref|XP_003526320.1|
Domains
17
Lj1g3v1856380.3
– PREDICTED: cysteine--tRNA ligase-like isoform X2 [Cicer arietinum] gi|502132428|ref|XP_004501355.1|
Domains
16
Lj5g3v2182600.1
– PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max] gi|356575566|ref|XP_003555910.1|
Domains
14
LotjaGi1g1v0381500.1
– Cysteine--tRNA ligase; TAIR: AT2G31170.1 Cysteinyl-tRNA synthetase, class Ia family protein; Swiss-Prot: sp|F4IPY2|SYCM_ARATH Cysteine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A0B2PHM9|A0A0B2PHM9_GLYSO Cysteine--tRNA ligase; Found in the gene: LotjaGi1g1v0381500
Domains
17
LotjaGi1g1v0381500.2
– Cysteine--tRNA ligase; TAIR: AT2G31170.1 Cysteinyl-tRNA synthetase, class Ia family protein; Swiss-Prot: sp|F4IPY2|SYCM_ARATH Cysteine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|K7KTG7|K7KTG7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0381500
Domains
20
LotjaGi1g1v0381500.3
– Cysteine--tRNA ligase; TAIR: AT2G31170.1 Cysteinyl-tRNA synthetase, class Ia family protein; Swiss-Prot: sp|F4IPY2|SYCM_ARATH Cysteine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A0B2PHM9|A0A0B2PHM9_GLYSO Cysteine--tRNA ligase; Found in the gene: LotjaGi1g1v0381500
Domains
15
LotjaGi5g1v0338000.1
– Cysteine--tRNA ligase; TAIR: AT5G38830.1 Cysteinyl-tRNA synthetase, class Ia family protein; Swiss-Prot: sp|B3LFA4|SYCC2_ARATH Cysteine--tRNA ligase 2, cytoplasmic; TrEMBL-Plants: tr|A0A151U7E6|A0A151U7E6_CAJCA Cysteinyl-tRNA synthetase; Found in the gene: LotjaGi5g1v0338000
Domains
16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd00672 CDD 1 12.50