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pheS: phenylalanine--tRNA ligase, alpha subunit
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Phenylalanine-tRNA ligase activity | Catalysis of the reaction: ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + L-phenylalanyl-tRNA(Phe). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | Phenylalanyl-tRNA aminoacylation | The process of coupling phenylalanine to phenylalanyl-tRNA, catalyzed by phenylalanyl-tRNA synthetase. The phenylalanyl-tRNA synthetase is a class-II synthetase. However, unlike other class II enzymes, The activated amino acid is transferred to the 2'-OH group of a phenylalanine-accepting tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: probable phenylalanine--tRNA ligase alpha subunit-like [Cicer arietinum] gi|502080886|ref|XP_004486713.1| | 11 | ||
| – | PREDICTED: probable phenylalanine--tRNA ligase alpha subunit-like [Cicer arietinum] gi|502080886|ref|XP_004486713.1| | 11 | ||
| – | Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr|A0A151TGA0|A0A151TGA0_CAJCA Putative phenylalanyl-tRNA synthetase alpha chain; Found in the gene: LotjaGi2g1v0456000 | 18 | ||
| – | Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr|A0A151TGA0|A0A151TGA0_CAJCA Putative phenylalanyl-tRNA synthetase alpha chain; Found in the gene: LotjaGi2g1v0456000 | 18 | ||
| – | Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr|K7LSZ2|K7LSZ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0456000 | 11 | ||
| – | Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr|A0A151TGA0|A0A151TGA0_CAJCA Putative phenylalanyl-tRNA synthetase alpha chain; Found in the gene: LotjaGi3g1v0508200 | 18 | ||
| – | Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp|Q9T034|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr|A0A151TGA0|A0A151TGA0_CAJCA Putative phenylalanyl-tRNA synthetase alpha chain; Found in the gene: LotjaGi3g1v0508200 | 18 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd00496 | CDD | 1 | 14.29 |