Domain Predictions — View

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cd00496

Source: CDD

Description

PheRS_alpha_core

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 17

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v0054690.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: probable phenylalanine--tRNA ligase alpha subunit-like [Cicer arietinum] gi\|502080886\|ref\|XP_004486713.1\|	Domains G3DSA:3.30.930.10 IPR002319 IPR004529 IPR006195 PF01409 PS50862 PTHR11538 PTHR11538:SF40 SSF55681 TIGR00468 cd00496	11
Lj3g3v3348650.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: probable phenylalanine--tRNA ligase alpha subunit-like [Cicer arietinum] gi\|502080886\|ref\|XP_004486713.1\|	Domains G3DSA:3.30.930.10 IPR002319 IPR004529 IPR006195 PF01409 PS50862 PTHR11538 PTHR11538:SF40 SSF55681 TIGR00468 cd00496	11
LotjaGi2g1v0456000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp\|Q9T034\|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr\|A0A151TGA0\|A0A151TGA0_CAJCA Putative phenylalanyl-tRNA synthetase alpha chain; Found in the gene: LotjaGi2g1v0456000	Domains G3DSA:1.10.10.2310 G3DSA:1.10.10.2320 G3DSA:1.10.10.2330 G3DSA:3.30.930.10 IPR002319 IPR004529 IPR006195 IPR040724 IPR040725 PF01409 PF18552 PF18553 PS50862 PTHR11538 PTHR11538:SF40 SSF55681 TIGR00468 cd00496	18
LotjaGi2g1v0456000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp\|Q9T034\|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr\|A0A151TGA0\|A0A151TGA0_CAJCA Putative phenylalanyl-tRNA synthetase alpha chain; Found in the gene: LotjaGi2g1v0456000	Domains G3DSA:1.10.10.2310 G3DSA:1.10.10.2320 G3DSA:1.10.10.2330 G3DSA:3.30.930.10 IPR002319 IPR004529 IPR006195 IPR040724 IPR040725 PF01409 PF18552 PF18553 PS50862 PTHR11538 PTHR11538:SF40 SSF55681 TIGR00468 cd00496	18
LotjaGi2g1v0456000.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp\|Q9T034\|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr\|K7LSZ2\|K7LSZ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0456000	Domains G3DSA:3.30.930.10 IPR002319 IPR004529 IPR006195 PF01409 PS50862 PTHR11538 PTHR11538:SF40 SSF55681 TIGR00468 cd00496	11
LotjaGi3g1v0508200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp\|Q9T034\|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr\|A0A151TGA0\|A0A151TGA0_CAJCA Putative phenylalanyl-tRNA synthetase alpha chain; Found in the gene: LotjaGi3g1v0508200	Domains G3DSA:1.10.10.2310 G3DSA:1.10.10.2320 G3DSA:1.10.10.2330 G3DSA:3.30.930.10 IPR002319 IPR004529 IPR006195 IPR040724 IPR040725 PF01409 PF18552 PF18553 PS50862 PTHR11538 PTHR11538:SF40 SSF55681 TIGR00468 cd00496	18
LotjaGi3g1v0508200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine--tRNA ligase alpha subunit; TAIR: AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase; Swiss-Prot: sp\|Q9T034\|SYFA_ARATH Phenylalanine--tRNA ligase alpha subunit, cytoplasmic; TrEMBL-Plants: tr\|A0A151TGA0\|A0A151TGA0_CAJCA Putative phenylalanyl-tRNA synthetase alpha chain; Found in the gene: LotjaGi3g1v0508200	Domains G3DSA:1.10.10.2310 G3DSA:1.10.10.2320 G3DSA:1.10.10.2330 G3DSA:3.30.930.10 IPR002319 IPR004529 IPR006195 IPR040724 IPR040725 PF01409 PF18552 PF18553 PS50862 PTHR11538 PTHR11538:SF40 SSF55681 TIGR00468 cd00496	18
LotjaGi5g1v0089800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp\|Q94K73\|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|K7MVE7\|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0089800	Domains G3DSA:3.30.70.380 G3DSA:3.30.930.10 IPR002319 IPR004530 IPR005121 IPR006195 IPR036690 PF01409 PF03147 PS50862 PS51447 PTHR11538 PTHR11538:SF41 SM00896 SSF54991 SSF55681 cd00496	17
LotjaGi5g1v0089800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp\|Q94K73\|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|A0A1J7HX04\|A0A1J7HX04_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0089800	Domains G3DSA:3.30.70.380 G3DSA:3.30.930.10 IPR002319 IPR004530 IPR005121 IPR006195 IPR036690 PF01409 PF03147 PS50862 PS51447 PTHR11538 PTHR11538:SF41 SM00896 SSF54991 SSF55681 cd00496	17
LotjaGi5g1v0089800.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp\|Q94K73\|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|K7MVE7\|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0089800	Domains G3DSA:3.30.70.380 G3DSA:3.30.930.10 IPR002319 IPR004530 IPR005121 IPR006195 IPR036690 PF01409 PF03147 PS50862 PS51447 PTHR11538 PTHR11538:SF41 SM00896 SSF54991 SSF55681 cd00496	17
LotjaGi5g1v0089800.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp\|Q94K73\|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|K7MVE7\|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0089800	Domains G3DSA:3.30.70.380 G3DSA:3.30.930.10 IPR002319 IPR004530 IPR005121 IPR006195 IPR036690 PF01409 PF03147 PS50862 PS51447 PTHR11538 PTHR11538:SF41 SM00896 SSF54991 SSF55681 SignalP-TM cd00496	18
LotjaGi6g1v0336000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp\|Q94K73\|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|K7MVE7\|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0336000	Domains G3DSA:3.30.70.380 G3DSA:3.30.930.10 IPR002319 IPR004530 IPR005121 IPR006195 IPR036690 PF01409 PF03147 PS50862 PS51447 PTHR11538 PTHR11538:SF41 SM00896 SSF54991 SSF55681 SignalP-TM cd00496	18
LotjaGi6g1v0336000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp\|Q94K73\|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|K7MVE7\|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0336000	Domains G3DSA:3.30.70.380 G3DSA:3.30.930.10 IPR002319 IPR004530 IPR005121 IPR006195 IPR036690 PF01409 PF03147 PS50862 PS51447 PTHR11538 PTHR11538:SF41 SM00896 SSF54991 SSF55681 cd00496	17
LotjaGi6g1v0336000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp\|Q94K73\|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|K7MVE7\|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0336000	Domains G3DSA:3.30.70.380 G3DSA:3.30.930.10 IPR002319 IPR004530 IPR005121 IPR006195 IPR036690 PF01409 PF03147 PS50862 PS51447 PTHR11538 PTHR11538:SF41 SM00896 SSF54991 SSF55681 SignalP-TM cd00496	18
LotjaGi6g1v0336000.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp\|Q94K73\|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|A0A1J7HX04\|A0A1J7HX04_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0336000	Domains G3DSA:3.30.70.380 G3DSA:3.30.930.10 IPR002319 IPR004530 IPR005121 IPR006195 IPR036690 PF01409 PF03147 PS50862 PS51447 PTHR11538 PTHR11538:SF41 SM00896 SSF54991 SSF55681 cd00496	17
LotjaGi6g1v0336000.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp\|Q94K73\|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|K7MVE7\|K7MVE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0336000	Domains G3DSA:3.30.70.380 G3DSA:3.30.930.10 IPR002319 IPR004530 IPR005121 IPR006195 IPR036690 PF01409 PF03147 PS50862 PS51447 PTHR11538 PTHR11538:SF41 SM00896 SSF54991 SSF55681 cd00496	17
LotjaGi6g1v0336000.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phenylalanine--tRNA ligase alpha subunit; TAIR: AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein; Swiss-Prot: sp\|Q94K73\|SYFM_ARATH Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|A0A1J7HX04\|A0A1J7HX04_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0336000	Domains G3DSA:3.30.70.380 G3DSA:3.30.930.10 IPR002319 IPR004530 IPR005121 IPR006195 IPR036690 PF01409 PF03147 PS50862 PS51447 PTHR11538 PTHR11538:SF41 SM00896 SSF54991 SSF55681 cd00496	17

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd00496	CDD	1	5.88