Domain Predictions — View

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TIGR00803

Source: TIGRFAM

Description

nst: UDP-galactose transporter

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v5032360.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: LOW QUALITY PROTEIN: probable UDP-sugar transporter protein SLC35A4-like [Glycine max] gi\|356573211\|ref\|XP_003554757.1\|	Domains CYTOPLASMIC_DOMAIN IPR007271 NON_CYTOPLASMIC_DOMAIN PF04142 PIRSF005799 PTHR10231 PTHR10231:SF48 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF103481 SignalP-noTM_EUK TIGR00803 TMhelix TRANSMEMBRANE	16
Lj2g3v3413320.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: probable UDP-sugar transporter protein SLC35A5-like [Glycine max] gi\|356554409\|ref\|XP_003545539.1\|	Domains CYTOPLASMIC_DOMAIN IPR007271 NON_CYTOPLASMIC_DOMAIN PF04142 PIRSF005799 PTHR10231 PTHR10231:SF43 TIGR00803 TMhelix TRANSMEMBRANE	10
LotjaGi1g1v0789900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CMP-sialic acid transporter, putative; TAIR: AT5G41760.1 Nucleotide-sugar transporter family protein; Swiss-Prot: sp\|Q8LGE9\|CSTR1_ARATH CMP-sialic acid transporter 1; TrEMBL-Plants: tr\|A0A0L9VLV3\|A0A0L9VLV3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0789900	Domains CYTOPLASMIC_DOMAIN IPR007271 NON_CYTOPLASMIC_DOMAIN PF04142 PIRSF005799 PTHR10231 PTHR10231:SF77 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF103481 SignalP-TM TIGR00803 TMhelix TRANSMEMBRANE	16
LotjaGi1g1v0789900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CMP-sialic acid transporter, putative; TAIR: AT5G41760.1 Nucleotide-sugar transporter family protein; Swiss-Prot: sp\|Q8LGE9\|CSTR1_ARATH CMP-sialic acid transporter 1; TrEMBL-Plants: tr\|A0A1J7HWB5\|A0A1J7HWB5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0789900	Domains CYTOPLASMIC_DOMAIN IPR007271 NON_CYTOPLASMIC_DOMAIN PF04142 PIRSF005799 PTHR10231 PTHR10231:SF77 SSF103481 TIGR00803 TMhelix TRANSMEMBRANE	11
LotjaGi1g1v0789900.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CMP-sialic acid transporter, putative; TAIR: AT5G41760.1 Nucleotide-sugar transporter family protein; Swiss-Prot: sp\|Q8LGE9\|CSTR1_ARATH CMP-sialic acid transporter 1; TrEMBL-Plants: tr\|A0A0L9VLV3\|A0A0L9VLV3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0789900	Domains CYTOPLASMIC_DOMAIN IPR007271 NON_CYTOPLASMIC_DOMAIN PF04142 PIRSF005799 PTHR10231 PTHR10231:SF77 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF103481 SignalP-TM TIGR00803 TMhelix TRANSMEMBRANE	16
LotjaGi1g1v0789900.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CMP-sialic acid transporter, putative; TAIR: AT5G41760.1 Nucleotide-sugar transporter family protein; Swiss-Prot: sp\|Q8LGE9\|CSTR1_ARATH CMP-sialic acid transporter 1; TrEMBL-Plants: tr\|A0A0L9VLV3\|A0A0L9VLV3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0789900	Domains CYTOPLASMIC_DOMAIN IPR007271 NON_CYTOPLASMIC_DOMAIN PF04142 PIRSF005799 PTHR10231 PTHR10231:SF77 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF103481 SignalP-TM TIGR00803 TMhelix TRANSMEMBRANE	16
LotjaGi5g1v0363200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cmp-sialic acid transporter, putative; TAIR: AT3G59360.1 UDP-galactose transporter 6; Swiss-Prot: sp\|Q9C5H6\|CSTR3_ARATH CMP-sialic acid transporter 3; TrEMBL-Plants: tr\|A0A151U7V2\|A0A151U7V2_CAJCA Putative UDP-sugar transporter protein SLC35A4; Found in the gene: LotjaGi5g1v0363200	Domains CYTOPLASMIC_DOMAIN IPR007271 NON_CYTOPLASMIC_DOMAIN PF04142 PIRSF005799 PTHR10231 PTHR10231:SF72 SSF103481 TIGR00803 TMhelix TRANSMEMBRANE	11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	14.29