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TIGR01310

Source: TIGRFAM

Description

uL30_euk: 60S ribosomal protein uL30

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000463
Biological process Maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
Subterm of
GO:0003735
Molecular function Structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.
Subterm of
GO:0022625
Cellular component Cytosolic large ribosomal subunit The large subunit of a ribosome located in the cytosol.
Subterm of
Part of

Associated Lotus transcripts 8

Transcript Name Description Predicted domains Domain count
Lj3g3v2055450.1
– PREDICTED: 60S ribosomal protein L7-4-like [Glycine max] gi|356526310|ref|XP_003531761.1|
Domains
13
Lj4g3v3099560.1
– PREDICTED: 60S ribosomal protein L7-1-like [Cicer arietinum] gi|502174832|ref|XP_004515609.1|
Domains
12
Lj6g3v1319710.1
– PREDICTED: 60S ribosomal protein L7-4-like [Cicer arietinum] gi|502085817|ref|XP_004488017.1|
Domains
13
LotjaGi3g1v0345100.1
– 60S ribosomal protein L7; TAIR: AT3G13580.1 Ribosomal protein L30/L7 family protein; Swiss-Prot: sp|Q9LHP1|RL74_ARATH 60S ribosomal protein L7-4; TrEMBL-Plants: tr|I3T3P4|I3T3P4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0345100
Domains
19
LotjaGi3g1v0345100.3
– 60S ribosomal protein L7; TAIR: AT3G13580.1 Ribosomal protein L30/L7 family protein; Swiss-Prot: sp|Q9LHP1|RL74_ARATH 60S ribosomal protein L7-4; TrEMBL-Plants: tr|I3T3P4|I3T3P4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0345100
Domains
19
LotjaGi4g1v0454000.1
– 60S ribosomal protein L7; TAIR: AT1G80750.1 Ribosomal protein L30/L7 family protein; Swiss-Prot: sp|Q9SAI5|RL71_ARATH 60S ribosomal protein L7-1; TrEMBL-Plants: tr|I3S755|I3S755_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0454000
Domains
17
LotjaGi6g1v0234100.1
– 60S ribosomal protein L7; TAIR: AT2G01250.1 Ribosomal protein L30/L7 family protein; Swiss-Prot: sp|P60040|RL72_ARATH 60S ribosomal protein L7-2; TrEMBL-Plants: tr|I3S9R2|I3S9R2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0234100
Domains
19
LotjaGi6g1v0234100.2
– 60S ribosomal protein L7; TAIR: AT2G01250.1 Ribosomal protein L30/L7 family protein; Swiss-Prot: sp|P60040|RL72_ARATH 60S ribosomal protein L7-2; TrEMBL-Plants: tr|I3S9R2|I3S9R2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0234100
Domains
19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd01657 CDD 1 12.50