Domain Predictions — View

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PF00327

Source: Pfam

Description

Ribosomal protein L30p/L7e

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 25

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0263999.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CM0545.370.nc [Lotus japonicus] gi\|164605530\|dbj\|BAF98596.1\|	Domains G3DSA:3.30.1390.20 IPR005996 IPR016082 PF00327 PTHR15892 SSF55129 TIGR01308 cd01658 mobidb-lite	9
Lj2g3v2904930.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CM0545.370.nc [Lotus japonicus] gi\|164605530\|dbj\|BAF98596.1\|	Domains G3DSA:3.30.1390.20 IPR005996 IPR016082 MF_01371_B PF00327 PTHR15892 SSF55129 TIGR01308 cd01658 mobidb-lite	10
Lj3g3v2055450.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: 60S ribosomal protein L7-4-like [Glycine max] gi\|356526310\|ref\|XP_003531761.1\|	Domains Coil G3DSA:3.30.1390.20 IPR005998 IPR012988 IPR016082 IPR018038 PF00327 PF08079 PS00634 PTHR11524 SSF55129 TIGR01310 cd01657	13
Lj4g3v2139560.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: 60S ribosomal protein L7-1-like [Cicer arietinum] gi\|502174832\|ref\|XP_004515609.1\|	Domains G3DSA:3.30.1390.20 IPR016082 PF00327 PTHR11524 PTHR11524:SF11 SSF55129 cd01657 mobidb-lite	8
Lj4g3v3099560.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: 60S ribosomal protein L7-1-like [Cicer arietinum] gi\|502174832\|ref\|XP_004515609.1\|	Domains G3DSA:3.30.1390.20 IPR005998 IPR012988 IPR016082 PF00327 PF08079 PTHR11524 PTHR11524:SF11 SSF55129 TIGR01310 cd01657 mobidb-lite	12
Lj6g3v1319710.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: 60S ribosomal protein L7-4-like [Cicer arietinum] gi\|502085817\|ref\|XP_004488017.1\|	Domains Coil G3DSA:3.30.1390.20 IPR005998 IPR012988 IPR016082 IPR018038 PF00327 PF08079 PS00634 PTHR11524 SSF55129 TIGR01310 cd01657	13
LotjaGi1g1v0061900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	50S ribosomal protein L30; TAIR: AT5G55140.1 ribosomal protein L30 family protein; Swiss-Prot: sp\|C3PL27\|RL30_CORA7 50S ribosomal protein L30; TrEMBL-Plants: tr\|B0BLA7\|B0BLA7_LOTJA CM0545.370.nc protein; Found in the gene: LotjaGi1g1v0061900	Domains G3DSA:3.30.1390.20 IPR005996 IPR016082 IPR036919 MF_01371_B PF00327 PTHR15892 SSF55129 TIGR01308 cd01658 mobidb-lite	11
LotjaGi1g1v0061900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	50S ribosomal protein L30; TAIR: AT5G55140.1 ribosomal protein L30 family protein; Swiss-Prot: sp\|C3PL27\|RL30_CORA7 50S ribosomal protein L30; TrEMBL-Plants: tr\|B0BLA7\|B0BLA7_LOTJA CM0545.370.nc protein; Found in the gene: LotjaGi1g1v0061900	Domains G3DSA:3.30.1390.20 IPR005996 IPR016082 IPR036919 MF_01371_B PF00327 PTHR15892 SSF55129 TIGR01308 cd01658 mobidb-lite	11
LotjaGi1g1v0061900.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	50S ribosomal protein L30; TAIR: AT5G55140.1 ribosomal protein L30 family protein; Swiss-Prot: sp\|C3PL27\|RL30_CORA7 50S ribosomal protein L30; TrEMBL-Plants: tr\|B0BLA7\|B0BLA7_LOTJA CM0545.370.nc protein; Found in the gene: LotjaGi1g1v0061900	Domains G3DSA:3.30.1390.20 IPR005996 IPR016082 IPR036919 MF_01371_B PF00327 PTHR15892 SSF55129 TIGR01308 cd01658 mobidb-lite	11
LotjaGi1g1v0065300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	50S ribosomal protein L30; TAIR: AT5G55140.1 ribosomal protein L30 family protein; Swiss-Prot: sp\|C3PL27\|RL30_CORA7 50S ribosomal protein L30; TrEMBL-Plants: tr\|B0BLA7\|B0BLA7_LOTJA CM0545.370.nc protein; Found in the gene: LotjaGi1g1v0065300	Domains G3DSA:3.30.1390.20 IPR005996 IPR016082 IPR036919 MF_01371_B PF00327 PTHR15892 SSF55129 TIGR01308 cd01658 mobidb-lite	11
LotjaGi1g1v0065300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	50S ribosomal protein L30; TAIR: AT5G55140.1 ribosomal protein L30 family protein; Swiss-Prot: sp\|C3PL27\|RL30_CORA7 50S ribosomal protein L30; TrEMBL-Plants: tr\|B0BLA7\|B0BLA7_LOTJA CM0545.370.nc protein; Found in the gene: LotjaGi1g1v0065300	Domains G3DSA:3.30.1390.20 IPR005996 IPR016082 IPR036919 MF_01371_B PF00327 PTHR15892 SSF55129 TIGR01308 cd01658 mobidb-lite	11
LotjaGi1g1v0065300.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	50S ribosomal protein L30; TAIR: AT5G55140.1 ribosomal protein L30 family protein; Swiss-Prot: sp\|C3PL27\|RL30_CORA7 50S ribosomal protein L30; TrEMBL-Plants: tr\|B0BLA7\|B0BLA7_LOTJA CM0545.370.nc protein; Found in the gene: LotjaGi1g1v0065300	Domains G3DSA:3.30.1390.20 IPR005996 IPR016082 IPR036919 MF_01371_B PF00327 PTHR15892 SSF55129 TIGR01308 cd01658 mobidb-lite	11
LotjaGi1g1v0065500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	50S ribosomal protein L30; TAIR: AT5G55140.1 ribosomal protein L30 family protein; Swiss-Prot: sp\|C3PL27\|RL30_CORA7 50S ribosomal protein L30; TrEMBL-Plants: tr\|B0BLA7\|B0BLA7_LOTJA CM0545.370.nc protein; Found in the gene: LotjaGi1g1v0065500	Domains G3DSA:3.30.1390.20 IPR005996 IPR016082 IPR036919 MF_01371_B PF00327 PTHR15892 SSF55129 TIGR01308 cd01658 mobidb-lite	11
LotjaGi1g1v0065500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	50S ribosomal protein L30; TAIR: AT5G55140.1 ribosomal protein L30 family protein; Swiss-Prot: sp\|C3PL27\|RL30_CORA7 50S ribosomal protein L30; TrEMBL-Plants: tr\|B0BLA7\|B0BLA7_LOTJA CM0545.370.nc protein; Found in the gene: LotjaGi1g1v0065500	Domains G3DSA:3.30.1390.20 IPR005996 IPR016082 IPR036919 MF_01371_B PF00327 PTHR15892 SSF55129 TIGR01308 cd01658	10
LotjaGi1g1v0065500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	50S ribosomal protein L30; TAIR: AT5G55140.1 ribosomal protein L30 family protein; Swiss-Prot: sp\|C3PL27\|RL30_CORA7 50S ribosomal protein L30; TrEMBL-Plants: tr\|B0BLA7\|B0BLA7_LOTJA CM0545.370.nc protein; Found in the gene: LotjaGi1g1v0065500	Domains G3DSA:3.30.1390.20 IPR005996 IPR016082 IPR036919 MF_01371_B PF00327 PTHR15892 SSF55129 TIGR01308 cd01658 mobidb-lite	11
LotjaGi1g1v0065500.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	50S ribosomal protein L30; TAIR: AT5G55140.1 ribosomal protein L30 family protein; Swiss-Prot: sp\|C3PL27\|RL30_CORA7 50S ribosomal protein L30; TrEMBL-Plants: tr\|B0BLA7\|B0BLA7_LOTJA CM0545.370.nc protein; Found in the gene: LotjaGi1g1v0065500	Domains G3DSA:3.30.1390.20 IPR005996 IPR016082 IPR036919 MF_01371_B PF00327 PTHR15892 SSF55129 TIGR01308 cd01658	10
LotjaGi2g1v0001100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	50S ribosomal L30-like protein; TAIR: AT5G55140.1 ribosomal protein L30 family protein; Swiss-Prot: sp\|Q47J85\|RL30_DECAR 50S ribosomal protein L30; TrEMBL-Plants: tr\|I3S406\|I3S406_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0001100_LC	Domains G3DSA:3.30.1390.20 IPR005996 IPR016082 IPR036919 PF00327 PTHR15892 SSF55129 TIGR01308 cd00355 mobidb-lite	10
LotjaGi3g1v0345100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S ribosomal protein L7; TAIR: AT3G13580.1 Ribosomal protein L30/L7 family protein; Swiss-Prot: sp\|Q9LHP1\|RL74_ARATH 60S ribosomal protein L7-4; TrEMBL-Plants: tr\|I3T3P4\|I3T3P4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0345100	Domains Coil G3DSA:1.10.15.30 G3DSA:3.30.1390.20 IPR005998 IPR012988 IPR016082 IPR018038 IPR023106 IPR035808 IPR036919 IPR039699 PF00327 PF08079 PS00634 PTHR11524 PTHR11524:SF31 SSF55129 TIGR01310 cd01657	19
LotjaGi3g1v0345100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S ribosomal protein L7; TAIR: AT3G13580.1 Ribosomal protein L30/L7 family protein; Swiss-Prot: sp\|Q9LHP1\|RL74_ARATH 60S ribosomal protein L7-4; TrEMBL-Plants: tr\|I3T3P4\|I3T3P4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0345100	Domains Coil IPR012988 IPR016082 IPR036919 IPR039699 PF00327 PF08079 PTHR11524 PTHR11524:SF31 SSF55129	10
LotjaGi3g1v0345100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S ribosomal protein L7; TAIR: AT3G13580.1 Ribosomal protein L30/L7 family protein; Swiss-Prot: sp\|Q9LHP1\|RL74_ARATH 60S ribosomal protein L7-4; TrEMBL-Plants: tr\|I3T3P4\|I3T3P4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0345100	Domains Coil G3DSA:1.10.15.30 G3DSA:3.30.1390.20 IPR005998 IPR012988 IPR016082 IPR018038 IPR023106 IPR035808 IPR036919 IPR039699 PF00327 PF08079 PS00634 PTHR11524 PTHR11524:SF31 SSF55129 TIGR01310 cd01657	19
LotjaGi4g1v0306800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S ribosomal protein L7; TAIR: AT2G01250.1 Ribosomal protein L30/L7 family protein; Swiss-Prot: sp\|P60040\|RL72_ARATH 60S ribosomal protein L7-2; TrEMBL-Plants: tr\|I3STJ3\|I3STJ3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0306800_LC	Domains G3DSA:1.10.15.30 G3DSA:3.30.1390.20 IPR016082 IPR023106 IPR035808 IPR036919 IPR039699 PF00327 PTHR11524 PTHR11524:SF36 SSF55129 TMhelix cd01657	13
LotjaGi4g1v0306800_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S ribosomal protein L7; TAIR: AT2G01250.1 Ribosomal protein L30/L7 family protein; Swiss-Prot: sp\|P60040\|RL72_ARATH 60S ribosomal protein L7-2; TrEMBL-Plants: tr\|I3STJ3\|I3STJ3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0306800_LC	Domains G3DSA:1.10.15.30 G3DSA:3.30.1390.20 IPR016082 IPR023106 IPR035808 IPR036919 IPR039699 PF00327 PTHR11524 PTHR11524:SF36 SSF55129 cd01657	12
LotjaGi4g1v0454000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S ribosomal protein L7; TAIR: AT1G80750.1 Ribosomal protein L30/L7 family protein; Swiss-Prot: sp\|Q9SAI5\|RL71_ARATH 60S ribosomal protein L7-1; TrEMBL-Plants: tr\|I3S755\|I3S755_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0454000	Domains G3DSA:1.10.15.30 G3DSA:3.30.1390.20 IPR005998 IPR012988 IPR016082 IPR023106 IPR035808 IPR036919 IPR039699 PF00327 PF08079 PTHR11524 PTHR11524:SF36 SSF55129 TIGR01310 cd01657 mobidb-lite	17
LotjaGi6g1v0234100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S ribosomal protein L7; TAIR: AT2G01250.1 Ribosomal protein L30/L7 family protein; Swiss-Prot: sp\|P60040\|RL72_ARATH 60S ribosomal protein L7-2; TrEMBL-Plants: tr\|I3S9R2\|I3S9R2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0234100	Domains Coil G3DSA:1.10.15.30 G3DSA:3.30.1390.20 IPR005998 IPR012988 IPR016082 IPR018038 IPR023106 IPR035808 IPR036919 IPR039699 PF00327 PF08079 PS00634 PTHR11524 PTHR11524:SF30 SSF55129 TIGR01310 cd01657	19
LotjaGi6g1v0234100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S ribosomal protein L7; TAIR: AT2G01250.1 Ribosomal protein L30/L7 family protein; Swiss-Prot: sp\|P60040\|RL72_ARATH 60S ribosomal protein L7-2; TrEMBL-Plants: tr\|I3S9R2\|I3S9R2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0234100	Domains Coil G3DSA:1.10.15.30 G3DSA:3.30.1390.20 IPR005998 IPR012988 IPR016082 IPR018038 IPR023106 IPR035808 IPR036919 IPR039699 PF00327 PF08079 PS00634 PTHR11524 PTHR11524:SF30 SSF55129 TIGR01310 cd01657	19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd01657	CDD	1	4.00