Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TIGR01429

Source: TIGRFAM

Description

AMP_deaminase: AMP deaminase

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0003876 View details of GO:0003876 AmiGO InterPro QuickGO	Molecular function	AMP deaminase activity	Catalysis of the reaction: AMP + H2O = IMP + NH3.	Subterm of GO:0047623
GO:0032264 View details of GO:0032264 AmiGO InterPro QuickGO	Biological process	IMP salvage	Any process which produces inosine monophosphate from derivatives of it, without de novo synthesis.	Subterm of GO:0006188 GO:0032261

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0277479.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: AMP deaminase-like [Cicer arietinum] gi\|502155011\|ref\|XP_004509928.1\|	Domains G3DSA:3.20.20.140 IPR001365 IPR006329 IPR006650 IPR032466 PF00962 PS00485 PTHR11359 PTHR11359:SF9 SFLDF00063 SSF51556 TIGR01429 cd01319 mobidb-lite	14
LotjaGi3g1v0194500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	AMP deaminase; TAIR: AT2G38280.1 AMP deaminase, putative / myoadenylate deaminase; Swiss-Prot: sp\|O80452\|AMPD_ARATH AMP deaminase; TrEMBL-Plants: tr\|I1JLC7\|I1JLC7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0194500	Domains G3DSA:2.30.30.800 G3DSA:3.20.20.140 IPR001365 IPR006329 IPR006650 IPR032466 NON_CYTOPLASMIC_DOMAIN PF00962 PS00485 PTHR11359 PTHR11359:SF10 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51556 TIGR01429 TMhelix cd01319 mobidb-lite	20
LotjaGi3g1v0194500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	AMP deaminase; TAIR: AT2G38280.1 AMP deaminase, putative / myoadenylate deaminase; Swiss-Prot: sp\|O80452\|AMPD_ARATH AMP deaminase; TrEMBL-Plants: tr\|I1JLC7\|I1JLC7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0194500	Domains G3DSA:2.30.30.800 G3DSA:3.20.20.140 IPR001365 IPR006329 IPR006650 IPR032466 NON_CYTOPLASMIC_DOMAIN PF00962 PS00485 PTHR11359 PTHR11359:SF10 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51556 TIGR01429 TMhelix cd01319 mobidb-lite	20
LotjaGi3g1v0194500.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	AMP deaminase; TAIR: AT2G38280.1 AMP deaminase, putative / myoadenylate deaminase; Swiss-Prot: sp\|O80452\|AMPD_ARATH AMP deaminase; TrEMBL-Plants: tr\|I1JLC7\|I1JLC7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0194500	Domains G3DSA:2.30.30.800 G3DSA:3.20.20.140 IPR001365 IPR006329 IPR006650 IPR032466 NON_CYTOPLASMIC_DOMAIN PF00962 PS00485 PTHR11359 PTHR11359:SF10 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51556 TIGR01429 TMhelix cd01319 mobidb-lite	20
LotjaGi3g1v0194500.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	AMP deaminase; TAIR: AT2G38280.1 AMP deaminase, putative / myoadenylate deaminase; Swiss-Prot: sp\|O80452\|AMPD_ARATH AMP deaminase; TrEMBL-Plants: tr\|I1JLC7\|I1JLC7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0194500	Domains G3DSA:2.30.30.800 G3DSA:3.20.20.140 IPR001365 IPR006329 IPR006650 IPR032466 NON_CYTOPLASMIC_DOMAIN PF00962 PS00485 PTHR11359 PTHR11359:SF10 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51556 TIGR01429 TMhelix cd01319 mobidb-lite	20
LotjaGi3g1v0194500.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	AMP deaminase; TAIR: AT2G38280.1 AMP deaminase, putative / myoadenylate deaminase; Swiss-Prot: sp\|O80452\|AMPD_ARATH AMP deaminase; TrEMBL-Plants: tr\|I1JLC7\|I1JLC7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0194500	Domains G3DSA:2.30.30.800 G3DSA:3.20.20.140 IPR001365 IPR006329 IPR006650 IPR032466 NON_CYTOPLASMIC_DOMAIN PF00962 PS00485 PTHR11359 PTHR11359:SF10 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51556 TIGR01429 TMhelix cd01319 mobidb-lite	20
LotjaGi4g1v0181600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	AMP deaminase; TAIR: AT2G38280.1 AMP deaminase, putative / myoadenylate deaminase; Swiss-Prot: sp\|O80452\|AMPD_ARATH AMP deaminase; TrEMBL-Plants: tr\|A0A151RKB3\|A0A151RKB3_CAJCA AMP deaminase; Found in the gene: LotjaGi4g1v0181600	Domains CYTOPLASMIC_DOMAIN G3DSA:2.30.30.800 G3DSA:3.20.20.140 IPR001365 IPR006329 IPR006650 IPR032466 NON_CYTOPLASMIC_DOMAIN PF00962 PS00485 PTHR11359 PTHR11359:SF9 SSF51556 TIGR01429 TMhelix TRANSMEMBRANE cd01319 mobidb-lite	18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	14.29