Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TIGR01677

Source: TIGRFAM

Description

pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v5060530.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: L-gulonolactone oxidase-like [Glycine max] gi\|356506098\|ref\|XP_003521824.1\|	Domains G3DSA:3.30.43.10 G3DSA:3.30.465.10 IPR006094 IPR007173 IPR010030 IPR016166 IPR016167 IPR016169 NON_CYTOPLASMIC_DOMAIN PF01565 PF04030 PS51387 PTHR13878 PTHR13878:SF63 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF56176 SignalP-noTM_EUK TIGR01677	21
Lj1g3v5060540.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: LOW QUALITY PROTEIN: L-gulonolactone oxidase-like, partial [Glycine max] gi\|356571262\|ref\|XP_003553798.1\|	Domains G3DSA:3.30.43.10 G3DSA:3.30.465.10 IPR006094 IPR007173 IPR010030 IPR016166 IPR016167 IPR016169 NON_CYTOPLASMIC_DOMAIN PF01565 PF04030 PS51387 PTHR13878 PTHR13878:SF63 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF56176 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK TIGR01677	22
Lj3g3v2483050.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: L-gulonolactone oxidase-like [Glycine max] gi\|356560249\|ref\|XP_003548406.1\|	Domains G3DSA:3.30.465.10 IPR006094 IPR007173 IPR010030 IPR016166 IPR016169 NON_CYTOPLASMIC_DOMAIN PF01565 PF04030 PS51387 PTHR13878 PTHR13878:SF63 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF56176 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE TIGR01677	21
LotjaGi1g1v0796200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	L-gulonolactone oxidase; TAIR: AT2G46760.1 D-arabinono-1,4-lactone oxidase family protein; Swiss-Prot: sp\|O81032\|GGLO6_ARATH Probable L-gulonolactone oxidase 6; TrEMBL-Plants: tr\|V7B0C2\|V7B0C2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0796200	Domains G3DSA:3.30.465.10 IPR006094 IPR007173 IPR010030 IPR016166 IPR016169 IPR036318 NON_CYTOPLASMIC_DOMAIN PF01565 PF04030 PS51387 PTHR13878 PTHR13878:SF93 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF56176 SignalP-noTM TIGR01677	20
LotjaGi1g1v0796300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	L-gulonolactone oxidase; TAIR: AT2G46760.1 D-arabinono-1,4-lactone oxidase family protein; Swiss-Prot: sp\|O81032\|GGLO6_ARATH Probable L-gulonolactone oxidase 6; TrEMBL-Plants: tr\|I1NCQ4\|I1NCQ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0796300	Domains G3DSA:3.30.465.10 IPR006094 IPR007173 IPR010030 IPR016166 IPR016169 IPR036318 NON_CYTOPLASMIC_DOMAIN PF01565 PF04030 PS51387 PTHR13878 PTHR13878:SF93 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF56176 SignalP-TM SignalP-noTM TIGR01677	21
LotjaGi3g1v0054600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	L-gulonolactone oxidase; TAIR: AT5G11540.1 D-arabinono-1,4-lactone oxidase family protein; Swiss-Prot: sp\|Q9LYD8\|GGLO3_ARATH L-gulonolactone oxidase 3; TrEMBL-Plants: tr\|A0A0S3RMW2\|A0A0S3RMW2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0054600	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.43.10 G3DSA:3.30.465.10 IPR006094 IPR007173 IPR010030 IPR016166 IPR016167 IPR016169 IPR036318 NON_CYTOPLASMIC_DOMAIN PF01565 PF04030 PS51387 PTHR13878 PTHR13878:SF125 SSF56176 SignalP-noTM TIGR01677 TRANSMEMBRANE	20
LotjaGi3g1v0401900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	L-gulonolactone oxidase; TAIR: AT2G46760.1 D-arabinono-1,4-lactone oxidase family protein; Swiss-Prot: sp\|O81032\|GGLO6_ARATH Probable L-gulonolactone oxidase 6; TrEMBL-Plants: tr\|I1MKE1\|I1MKE1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0401900	Domains G3DSA:3.30.465.10 IPR006094 IPR007173 IPR010030 IPR016166 IPR016169 IPR036318 NON_CYTOPLASMIC_DOMAIN PF01565 PF04030 PS51387 PTHR13878 PTHR13878:SF93 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF56176 SignalP-TM SignalP-noTM TIGR01677	21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TIGR01677	TIGRFAM	1	14.29